Protein

View in Explore
Genbank accession
WKM80778.1 [GenBank]
Protein name
L-shaped tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,81
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MADQNLKQIQFKRTSTENKAPGADIVARGEIVLNTHGRTLAIYTKDEADNVVQLAGKGVPFLDTAGNLNVDGITTLKDNVTISPNKAINFEATDLSGAIVRHIVGKCATNDGWYIGAGGTSNSGILEIGTIDDGAETIQFVQRGSGNVEARKLVLLDGSGNTTLPGDLRLSTNKTVKINNGSTLVLEMGVGSNDAYIKNQRGVGVLQLTNDSNLTFRNSQVYYAMNGRGPGKSGTLLTNVENNRQAWQYVISAATAGTPRWVKVATIKHPGDASSQLDLMITGGIDSGHGRHYVDFITLSGRNLTSWSTSNLDNWVEWRRIGSPSKGNVPEYYVVKNDAATDADASFDFYAKVPRYGNGLYVTVLNTAGYNGQDSGKVIIYETGQDTGATGPSGSILVSMKQIFDSLAKPDFGDTTGTLPVNRGGTGATSAGAARNNLGLGTAAVRNVGESSGNVMEVGAFGIGGNGKSIVDITSDVDLMTRLNALGGTTFRANVASGYTGSPYYSHGAGFFSKTGDTMAALNIDYATGVVKVFATNNRGLANGKVNYNMLYGTAYKPSKADVGLGNLTNDTQVKKAGDTMTGDLAAPNLHASGTGTASVYVNAGSGNAHVWFRTYANERGVIWATPNTADLGQINIRAKTTGGTSAGDFSFRSDGRLDVPVAVKVGGAAMLTKDGNITSGSMFGGNLNNYLNSIKNDIVSGDNKQVSKTGDTMTGNLTINANLKVENPNGTMADFGSENSDKYSRITLARKIGSGAAVAMLKITPEGYVQFGYQDAVANPSPTKYIRVKPDGLDVEGDLVFNQTYCGTEEAVDISDKTIDLNNLVIKRTDPGTRQLYKCVSSGGGSKIANKPTSDGNFVLEVLSLCKVSDNDWTCKQTFTTKNNTTVGTYVRYCQNGSWTAWEEVVSGVQPINLGGTGATSVAAARNNLGVGEGQTVTFGNLVTTDLTANGNARLVGRLNLGSASATGVLRANETGAVVLGSASGQNIHVRAGSADTSAGETRFEPNGNVTVGGAITASGSLQVNGEAAMSRSLIVSQNIKNTNDNSFILMGKDSDLGFVKKYNSGAKLVFASGKSFIVAKSSATTIANPATETYTDVFKVDADGNQTVYGNSTVSRALTVSSTATVNGVINANGGIIVPTTKYVQIADAPTQNNQATNKKYVDDKVASAISNAGDTYLPLAGGTVTGNLDVTGSRLKTTSLWVTGDAAVNGVLTVDGKARFNQEFSVSTSVNVQNTGNSHVFFRKADGTEKGLLWADEPGNVSIRAGGASGPVWNFWTSGSCQFPGAISNYNGISSTTNYPAGQPNGTYNNTAGLVSRFSNGAYASLYFQEYVGNFHQAIINVNGFGRDDSFYFRAGGDFICTRNGSFDNVEIRSDRRAKSDIKVIENALEKVETLSGNTYELHNTSGGTTRSAGLIAQEVQEVLPEAVTQDIEADGGLLRLNYNSVIALLVESVKELSAEVKGLKAEIEELKSK
Physico‐chemical
properties
protein length:1477 AA
molecular weight: 155100,26810 Da
isoelectric point:6,28170
aromaticity:0,07244
hydropathy:-0,26473

Domains

Domains [InterPro]
DC_1942
ATT
4–618
DC_1942 cd19958 DC_0246
DC_0468
STR
505–1004
DC_0468 IPR030392
IPR030392
CHP
1377–1432
IPR030392 Coil
WKM80778.1
1 1477
Architecture
ATT
STR
RBD
ATT 4-618 | STR 619-1004 | RBD 1079-1477
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WKM80778.1
1 1477
Domain Start End Length (AA) Confidence
N-terminal 1 1054 1054 0,1146
Central domain 1055 1253 200 0,4278
C-terminal 1254 1477 223 0,8661
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-1054
Central
1055-1253
C-terminal
1254-1477

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage ValerieMcCarty04
[NCBI] 		3061759 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WKM80778.1 [NCBI]
Genbank nucleotide accession
OR271596.1 [NCBI]
CDS location
range 148735 -> 153168
strand +
CDS
ATGGCCGATCAAAACTTAAAACAAATACAATTTAAAAGAACTAGCACAGAGAATAAAGCACCAGGTGCAGATATCGTAGCCCGTGGCGAAATCGTGTTGAATACACACGGGCGTACTCTTGCCATTTACACTAAAGATGAAGCCGATAACGTTGTTCAGCTTGCAGGTAAAGGTGTTCCTTTCTTAGATACTGCAGGTAATCTTAATGTTGATGGAATTACTACATTAAAAGACAACGTTACTATTTCTCCGAATAAAGCTATCAATTTTGAAGCCACTGATTTAAGCGGAGCAATAGTGCGTCATATCGTCGGCAAATGCGCTACTAACGATGGCTGGTACATCGGTGCAGGTGGTACAAGCAATAGCGGTATTCTTGAAATCGGTACTATTGACGATGGCGCTGAAACTATTCAATTCGTACAACGCGGAAGCGGCAACGTTGAAGCCCGAAAACTGGTCTTGCTTGACGGCTCGGGTAATACCACTCTTCCTGGTGATTTAAGATTATCCACTAATAAAACTGTTAAAATTAACAATGGAAGCACACTTGTCCTTGAAATGGGTGTAGGCTCTAACGACGCTTACATTAAAAACCAACGAGGCGTAGGTGTTCTTCAATTAACCAATGACAGTAATCTGACATTCAGAAATTCACAGGTTTATTACGCCATGAACGGAAGAGGTCCTGGTAAATCCGGTACTCTTCTGACGAATGTAGAAAACAACCGTCAGGCATGGCAATACGTAATTTCTGCTGCAACCGCTGGAACTCCGCGCTGGGTTAAAGTAGCTACAATTAAACACCCAGGAGATGCATCTTCACAGTTAGATTTAATGATTACTGGTGGCATTGATTCTGGACACGGAAGGCATTATGTTGATTTTATCACGTTATCTGGTCGCAATTTAACATCCTGGAGCACTAGCAATTTAGATAACTGGGTTGAATGGCGCAGGATTGGTTCTCCTTCTAAAGGAAACGTTCCAGAGTATTACGTTGTTAAAAATGATGCCGCTACTGATGCGGATGCTTCATTTGATTTTTACGCTAAAGTTCCTCGATACGGCAATGGCCTTTACGTTACAGTGCTAAACACTGCTGGATACAACGGTCAAGATAGCGGTAAAGTAATTATCTACGAAACTGGCCAAGATACTGGTGCTACTGGACCGTCTGGAAGTATTCTTGTTTCAATGAAGCAGATTTTTGACAGTTTAGCAAAACCAGATTTCGGCGATACTACAGGTACTCTTCCGGTTAACCGTGGTGGTACAGGTGCTACTAGCGCAGGAGCAGCTCGAAATAACTTAGGTTTAGGTACTGCTGCTGTGCGTAATGTCGGTGAATCCAGCGGAAACGTGATGGAAGTTGGTGCCTTTGGTATTGGTGGTAACGGAAAATCAATAGTAGATATTACTTCTGATGTTGATTTAATGACTCGCCTTAATGCTCTTGGCGGTACAACATTTAGAGCTAACGTAGCGAGTGGTTATACCGGGTCTCCTTATTATTCGCATGGTGCAGGATTCTTTTCTAAAACTGGCGATACGATGGCAGCGCTTAATATAGATTACGCAACTGGTGTCGTCAAAGTATTTGCTACAAATAATCGTGGTTTAGCAAACGGTAAAGTAAATTATAATATGCTTTACGGTACAGCATACAAACCGTCAAAGGCTGACGTCGGACTTGGTAATCTGACAAACGATACCCAAGTTAAGAAAGCTGGCGACACCATGACCGGTGATTTAGCTGCACCTAACCTCCATGCTTCCGGCACCGGTACTGCATCAGTGTATGTTAATGCAGGAAGCGGAAATGCTCATGTATGGTTTAGAACATACGCCAATGAACGTGGTGTAATTTGGGCAACTCCAAATACTGCTGATTTAGGACAAATTAATATTCGTGCAAAAACTACTGGTGGTACTTCTGCCGGTGATTTTAGCTTCCGTTCTGACGGCCGACTTGATGTTCCTGTAGCAGTTAAAGTTGGTGGGGCAGCAATGCTAACCAAAGACGGGAACATCACCTCTGGTTCAATGTTTGGCGGTAACCTTAACAACTATTTGAATTCTATTAAAAACGACATCGTTTCTGGGGATAATAAGCAAGTAAGTAAAACCGGTGACACAATGACCGGTAACTTGACTATTAACGCTAACTTAAAAGTCGAAAACCCTAATGGAACAATGGCTGATTTTGGTTCAGAGAACTCAGATAAGTATAGCAGAATAACTCTTGCTCGCAAAATTGGCTCTGGCGCTGCCGTAGCAATGCTTAAAATTACTCCTGAAGGATACGTGCAATTTGGTTATCAAGATGCAGTTGCTAATCCGTCTCCTACTAAGTACATCCGAGTTAAACCCGATGGCCTTGATGTAGAAGGGGATTTGGTTTTTAATCAGACATATTGCGGTACTGAAGAGGCAGTTGATATTTCTGATAAGACTATTGACCTTAATAATCTTGTCATTAAAAGAACCGATCCAGGTACTCGTCAGCTGTATAAATGTGTATCTTCTGGCGGTGGTTCTAAGATAGCAAACAAACCCACATCTGACGGTAACTTTGTTCTCGAAGTTCTGTCTTTATGTAAAGTTTCTGATAACGATTGGACATGTAAGCAGACCTTTACTACAAAGAATAACACCACTGTTGGCACATATGTTCGATACTGCCAAAATGGCTCATGGACTGCATGGGAAGAAGTTGTATCTGGTGTACAACCGATTAATCTTGGTGGTACTGGAGCAACTTCTGTAGCTGCTGCTCGTAACAACCTCGGTGTTGGTGAAGGCCAAACTGTAACATTCGGTAATTTAGTTACAACCGATTTAACCGCAAACGGAAACGCTAGATTAGTCGGAAGACTGAACCTTGGTTCTGCTTCTGCGACTGGCGTATTACGAGCTAATGAAACGGGTGCTGTTGTTTTAGGGTCTGCAAGTGGTCAAAATATCCATGTTAGAGCAGGAAGTGCCGATACTTCTGCGGGTGAAACTCGCTTTGAACCAAATGGAAACGTCACAGTTGGTGGTGCTATTACAGCTTCCGGAAGCCTGCAAGTAAATGGCGAAGCCGCTATGAGTAGAAGCTTGATCGTTTCTCAAAATATAAAGAATACTAACGATAACAGTTTTATTCTGATGGGAAAAGATTCGGATTTAGGTTTCGTTAAAAAATATAACTCAGGAGCTAAACTAGTATTTGCTTCAGGAAAATCGTTTATTGTCGCTAAATCGTCAGCAACTACCATAGCTAATCCAGCGACGGAAACTTACACTGATGTGTTTAAAGTTGATGCTGATGGAAACCAAACTGTTTATGGAAATTCAACAGTTTCTAGAGCTTTAACCGTTTCTAGCACAGCGACGGTTAATGGCGTTATTAATGCCAACGGCGGTATCATTGTTCCTACTACTAAGTATGTGCAAATTGCTGATGCTCCTACACAGAATAACCAAGCCACCAACAAGAAATATGTTGATGACAAGGTTGCTTCTGCTATTAGTAATGCCGGTGATACATATCTTCCATTAGCAGGTGGTACTGTAACTGGTAACTTAGATGTTACAGGAAGCCGGTTAAAAACTACATCGCTCTGGGTTACCGGTGATGCTGCTGTTAACGGTGTTTTAACTGTTGATGGAAAGGCTAGGTTTAATCAAGAGTTCAGTGTATCAACCTCAGTTAACGTCCAGAACACCGGTAATAGCCATGTGTTCTTCCGTAAAGCAGATGGTACAGAAAAAGGTCTTCTTTGGGCTGATGAGCCTGGTAATGTTAGTATAAGAGCCGGCGGTGCTTCTGGACCAGTATGGAATTTCTGGACCAGTGGTTCATGTCAATTCCCAGGAGCCATTTCTAACTATAACGGAATTAGCAGCACTACTAATTATCCTGCAGGACAACCCAATGGCACATATAACAATACCGCTGGGTTAGTAAGCAGATTTAGTAATGGTGCTTATGCCTCTCTGTATTTCCAAGAATATGTTGGTAACTTCCACCAAGCTATCATTAATGTTAATGGATTCGGTCGAGATGACAGTTTCTATTTCAGAGCTGGCGGTGACTTCATCTGTACTCGCAATGGTTCATTTGATAACGTTGAGATTCGTTCTGACCGTAGAGCTAAATCTGATATTAAAGTTATTGAAAACGCTTTGGAAAAAGTAGAGACCTTAAGCGGTAATACTTATGAGCTTCATAATACTTCTGGCGGTACTACTCGTTCTGCTGGGTTGATTGCTCAAGAAGTTCAAGAAGTTCTTCCGGAAGCAGTTACTCAAGATATTGAAGCGGACGGCGGATTATTGCGTCTGAATTACAACTCAGTAATTGCACTTCTTGTTGAATCTGTTAAAGAGCTTTCTGCTGAGGTTAAAGGCCTTAAAGCGGAAATTGAAGAACTTAAATCTAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
90b18c45341a00b914dabb2e01381efc6c8804fa31aef36f9389d2c5367c038c
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,4918
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation of two phages from wastewater treatment samples that infects a Klebsiella oxytoca clinical isolate derived from a diabetic ulcer Lewis,J.M., Arens,D.K., Tavana,J.P. and Quaye,A. 2025-01-16 — GenBank