Protein

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UniProt accession
S4TRC1 [UniProt]
Protein name
Tailspike protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence GenBank
Probability 1,00
TSP
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,94
TSP
Evidence UniProt/TrEMBL
Probability 1,00
Protein sequence
MIRTTNSCCGNEAGLVEKFIGTAYDVVKTVYENLGELQFIYDFLNKYGVLIAVSSVQELQALPTTAKYTRVYTFSATAGYGYTDYLYVDGDVTGVIPNDPTATGSWIVVASSTNAGSGSGDGGYIPWVYAQGSALGGETTIVVPDGTIGVPFIIVNGYMNTVGKGFTFDVGTLTITLAQPLEVGDEVVLLLSGTPAVPDNPNISDWIVFNWLYNGGAAVGGEQVINIPYTFQSVPAIFKNGLRYHPGLSTQSYTIDAANQRILLTEPLVTNDRLVVQVGGESVTVVMTDRTIQEVARAANVKDEQVILSTNTTSFLNGKTVIFDEVAQHIYGLPTLPNNVYISTVSNGQLTYNPGSVTVDLVPVPNPQIEAFKANTGAGLVGTLSGNSVQKELPTKMSAYTTLQEVATNAVNEIIIDEDYTFTDGESVDFGGKVLTINCKAKFIGDGILNWNNLGSGSTIVSPHMHTKTTPYTVFRFDSNGDWVTDPATVLASVTQRLDKGYKPNVNDHDIWSSLPDSIKNQVAGATLRVNSADNIRVSHPEATMGGYLFTLCNHILVESPRNFIAWESGITFENHHTTEWGTGNKVVGGEIKYGSGSAVVFIRNDGGDDHDGGVENLISYRVGESGVKTYQNEVGGRSARNYRLKFDNITTIQCYYDGIDVNADTGSPVERVDDYTLAEYPWFHLPTQHIIRNIITRDCMGIGAWWDGQMNIIDNVITYEAHKEGIFDRGTNNDITNVTVIGANKDLTNLNQLTCEGGSRLRGVMIHAYTTQGYAVYAPSSEISNVACAGSGTKLILCTYVGDIQGGNINVQHGDNTMTLAMRPAMGGTTNPSLLMTADCQVATPGGEASIVKLSAIQDGVRVGEMQLNRLGFKHMSIPVASTQLPESALEYNSSVGFFFGSDGVLRLLAKKPDGTFVTYTMS
Physico‐chemical
properties
protein length:924 AA
molecular weight: 99497,40450 Da
isoelectric point:4,77598
aromaticity:0,08874
hydropathy:-0,07792

Domains

Domains [InterPro]
DC_0041
STR
50–207
DC_0041 G3DSA:3.30.2020.50 IPR012332
G3DSA:3.30.2020.50
ATT
280–366
G3DSA:3.30.2020.50 IPR011050
IPR015331
RBD
395–922
IPR015331
IPR012332
STR
395–923
IPR012332
S4TRC1
1 924
Architecture
STR
ATT
STR
STR 50-207 | ATT 277-366 | STR 389-923 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
S4TRC1
1 924
Domain Start End Length (AA) Confidence
N-terminal 1 397 397 0,9928
Central domain 398 810 414 0,9874
C-terminal 811 924 113 0,8728
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-397
Central
398-810
C-terminal
811-924

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage FSL SP-058
[NCBI] 		1173761 Uroviricota > Caudoviricetes > Schitoviridae > Ithacavirus > Ithacavirus SP058
Host Salmonella enterica
[NCBI] 		28901 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales
Host Salmonella enterica subsp. enterica serovar Dublin
[NCBI] 		98360 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Salmonella

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AGF88193.1 [NCBI]
Genbank nucleotide accession
KC139517 [NCBI]
CDS location
range 60678 -> 63452
strand -
CDS
ATGATTCGAACTACGAATTCATGCTGCGGTAATGAAGCTGGACTGGTGGAGAAATTCATTGGTACTGCTTATGACGTAGTAAAGACTGTTTATGAAAATCTTGGTGAACTCCAGTTTATCTATGATTTCTTAAATAAGTATGGAGTACTTATTGCAGTTAGTTCTGTACAAGAATTACAGGCACTTCCTACAACTGCTAAGTACACTCGTGTATACACATTCTCTGCTACTGCTGGATATGGCTATACAGATTACCTGTATGTAGATGGGGATGTTACTGGTGTCATTCCTAATGACCCTACTGCTACAGGTTCTTGGATTGTTGTAGCTAGTTCTACTAATGCAGGAAGTGGTTCTGGTGATGGTGGGTACATTCCTTGGGTATATGCTCAAGGTTCTGCATTAGGTGGTGAGACTACTATCGTAGTTCCTGATGGAACTATTGGTGTTCCATTCATTATTGTGAATGGGTATATGAACACAGTTGGTAAAGGTTTTACATTTGATGTAGGAACTTTAACCATAACTTTAGCTCAACCATTAGAAGTAGGTGATGAAGTAGTCTTGTTATTATCTGGTACTCCTGCTGTTCCAGATAATCCTAATATCTCTGATTGGATTGTATTTAACTGGTTATACAATGGTGGGGCTGCTGTTGGGGGTGAACAGGTAATTAATATTCCTTACACCTTCCAATCTGTTCCAGCCATCTTTAAGAATGGGTTGAGATATCATCCTGGATTGAGTACTCAGTCATATACTATTGATGCAGCTAACCAACGAATCTTACTAACTGAACCATTAGTTACTAATGACCGTTTAGTAGTTCAGGTTGGTGGTGAATCTGTTACTGTAGTTATGACTGACCGTACTATTCAAGAAGTAGCACGAGCAGCTAATGTAAAAGATGAACAGGTAATTTTAAGTACCAATACTACTTCATTTTTAAATGGTAAGACTGTTATTTTTGATGAAGTAGCCCAACACATTTATGGATTACCTACCTTACCTAACAACGTTTATATCTCTACTGTTAGTAATGGTCAGCTAACGTATAATCCAGGTAGTGTTACAGTTGATTTAGTACCAGTACCCAATCCTCAGATTGAGGCTTTTAAAGCTAACACTGGTGCAGGTTTGGTTGGTACTTTGTCTGGTAATTCTGTCCAAAAGGAACTGCCTACTAAAATGTCTGCATATACTACTTTGCAAGAAGTAGCTACTAATGCTGTAAATGAAATTATCATTGATGAGGATTATACATTCACAGATGGTGAGTCTGTGGATTTCGGTGGTAAGGTCTTAACCATTAACTGTAAGGCTAAGTTTATTGGGGATGGTATACTCAACTGGAATAACTTAGGTAGTGGTTCTACTATAGTTTCCCCACACATGCATACTAAAACTACACCCTATACCGTATTTCGCTTTGATAGCAATGGGGATTGGGTAACAGACCCAGCTACCGTATTAGCCTCCGTTACCCAGAGACTGGATAAGGGTTATAAGCCTAATGTTAATGACCATGACATTTGGTCATCTCTTCCTGATTCTATTAAGAACCAGGTTGCTGGGGCAACTCTACGTGTAAACTCTGCTGATAATATTCGTGTGTCTCACCCGGAAGCTACTATGGGTGGGTATCTATTTACATTGTGTAATCATATTCTGGTTGAGTCTCCTAGAAACTTTATTGCATGGGAATCTGGTATTACCTTCGAGAACCACCACACTACAGAATGGGGAACTGGTAACAAGGTTGTAGGTGGTGAGATTAAGTACGGTTCTGGTTCTGCTGTTGTGTTCATCCGAAATGACGGTGGCGATGACCATGATGGTGGTGTAGAGAATCTTATTTCTTATCGTGTTGGTGAGTCCGGTGTTAAGACATACCAGAATGAGGTTGGTGGCAGGTCTGCCCGTAACTACCGACTTAAGTTCGATAACATCACTACAATTCAGTGTTACTACGATGGTATTGATGTTAATGCTGACACAGGTTCTCCTGTTGAGCGAGTGGACGACTATACTCTGGCAGAGTATCCATGGTTCCACTTGCCTACACAGCATATCATTAGGAACATCATCACCCGTGACTGTATGGGCATTGGTGCATGGTGGGATGGTCAAATGAATATTATTGATAATGTTATTACCTATGAAGCTCATAAAGAGGGTATTTTTGATAGAGGCACTAATAATGATATTACTAATGTAACAGTTATAGGTGCAAACAAAGATTTAACTAACCTAAATCAGCTTACATGTGAAGGTGGAAGCAGATTGCGCGGAGTGATGATTCATGCATACACCACACAAGGATATGCTGTTTATGCACCATCATCTGAAATTAGTAATGTAGCGTGTGCAGGGTCTGGCACTAAACTTATACTTTGTACGTATGTTGGTGATATTCAGGGTGGGAACATAAACGTACAGCATGGTGATAACACCATGACCCTGGCTATGCGTCCAGCAATGGGGGGAACAACAAACCCATCATTGCTTATGACAGCAGATTGCCAAGTGGCAACTCCAGGAGGTGAGGCTAGTATTGTTAAACTATCCGCTATCCAGGATGGTGTACGAGTAGGTGAGATGCAGTTAAACAGACTGGGCTTCAAGCATATGAGTATTCCGGTTGCATCTACTCAATTACCAGAGAGTGCCTTAGAGTATAACTCTTCTGTAGGGTTCTTCTTTGGTAGTGATGGTGTACTGAGACTACTTGCTAAGAAACCTGATGGTACGTTTGTAACGTACACCATGAGCTAA

Genome Context

Genome Context

Gene Ontology

Description Category Evidence (source)
GO:0044423 virion component Cellular Component IEA:UniProtKB-KW (UniProt)
GO:0051701 biological process involved in interaction with host Biological Process IEA:UniProtKB-ARBA (UniProt)
GO:0019058 viral life cycle Biological Process IEA:UniProtKB-ARBA (UniProt)

Tertiary structure

PDB ID
4cf6a607586723979acf5c5128ee89df8d19fb2df96928356e4c95a2ce3dfc9d
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6741
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50