Protein

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Genbank accession
AXG67149.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MARFRVRNAANNGWLDCVDTPMFIRTHAGDWTPLSPDKFSVRNQWGKSWMHINDSFDPTYDDPCSNLETGACGGGPTSTTKGSGNGIGSGGREKYDILKGYPAGFDLPDAGRTGFGLINSFSPPTGRSINRPGIKTIESYDPTGVASRAGLGTYANPNVPYASVHGRGAVITETYYAMPAIEGYVELMIASYAPAGASVDVYHMGVRVASTCGKLAGRSRIKFQFDPDAADMRIMVRVRTTQGYGWSLEVYPPRLAAPSDRGGLALDSQAAYDVINFPDVIHPDYIGSPIFPAPCHATVWPIAERIQNANAFEYYHFIGWTAGWMYLDYTSWETFDFIEVYQSGRRIATTLDARTGEGYLYFYFDPQGVACDIMVRVVSKDFGNAASLASCFYSLYCPGERGAREYMHPCQSYSVYSAGHPTTEDNFALGTQSDIRAELVVCVANSFDTKFEVFDQDMNVLDTSIVAAGKTGTLEFWKYPEHVLRSNITVRVTAPIGCDWSYFVYCPIQPPKINVSDFTVPYRCVTIEGGNDQPPDSDVLPWQPNAWEQTGGRGTGRPDASPVWTRDGNYMNIWGGVNGWFKWGNFFTKPIKQITFVWVYDGRNGGWHTIDIYERTAGEGAAQSPRNSSGVYQYFTFDVNIPVGQEIWLRVQGGGDRGDSNDLDYLGITNVVFE
Physico‐chemical
properties
protein length:674 AA
molecular weight: 74530,33470 Da
isoelectric point:5,12201
aromaticity:0,13501
hydropathy:-0,31350

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Dickeya phage vB_DsoM_AD1
[NCBI] 		2283029 Uroviricota > Caudoviricetes > Alexandravirus >
Host Dickeya solani MK10
[NCBI] 		1224151 Pseudomonadota > Gammaproteobacteria > Enterobacterales > Pectobacteriaceae > Dickeya > Dickeya solani

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AXG67149.1 [NCBI]
Genbank nucleotide accession
MH460463.1 [NCBI]
CDS location
range 69637 -> 71661
strand -
CDS
ATGGCTCGTTTTCGCGTTCGTAATGCTGCGAATAACGGTTGGCTTGACTGCGTGGACACGCCCATGTTCATACGCACACATGCAGGAGACTGGACACCATTAAGCCCAGACAAATTCAGTGTGCGTAATCAGTGGGGAAAGAGTTGGATGCACATCAACGACTCTTTCGACCCTACTTATGATGACCCGTGCTCAAACCTTGAGACGGGTGCATGTGGCGGCGGACCGACGTCAACTACCAAAGGTTCTGGTAACGGGATAGGGAGTGGCGGTCGTGAGAAATACGATATCCTCAAAGGCTATCCTGCGGGGTTCGATTTGCCTGATGCTGGTCGCACTGGCTTCGGTCTTATCAACTCTTTTTCTCCTCCTACTGGTCGATCTATCAATAGACCCGGCATCAAGACCATCGAATCATACGACCCTACTGGTGTTGCTTCTCGCGCAGGGCTAGGCACTTACGCTAACCCTAACGTGCCTTACGCTTCTGTTCATGGGCGTGGTGCTGTTATCACCGAGACGTATTATGCAATGCCAGCAATCGAAGGTTACGTTGAGCTGATGATCGCGTCCTATGCGCCAGCTGGTGCGAGTGTTGACGTGTACCATATGGGTGTGCGTGTTGCATCGACGTGTGGTAAGCTGGCTGGTCGCTCGCGTATCAAATTCCAGTTCGACCCTGACGCTGCTGATATGCGTATCATGGTGCGTGTGCGTACAACTCAGGGATACGGCTGGAGTTTAGAAGTATATCCGCCGCGCCTCGCAGCACCTTCTGACCGTGGTGGATTAGCTCTCGATAGTCAGGCCGCGTATGACGTTATCAACTTCCCTGACGTCATTCATCCAGACTACATCGGCAGCCCAATCTTCCCTGCGCCGTGCCATGCAACTGTTTGGCCTATCGCGGAACGTATTCAGAATGCTAACGCTTTCGAATACTATCACTTCATTGGTTGGACAGCGGGTTGGATGTATCTCGATTACACCTCATGGGAAACGTTCGACTTCATTGAGGTCTATCAGTCTGGTCGTCGTATCGCCACAACGCTTGATGCGCGTACTGGTGAGGGTTATCTGTATTTCTACTTTGACCCTCAAGGCGTTGCGTGTGATATCATGGTGCGCGTGGTCAGTAAGGACTTTGGTAATGCTGCATCGCTTGCGAGTTGCTTCTACAGTCTGTACTGTCCAGGTGAACGTGGTGCGCGTGAATACATGCACCCATGCCAGAGCTACAGCGTATACTCTGCCGGGCATCCAACCACAGAAGATAATTTTGCGTTAGGAACTCAGTCGGACATTCGCGCCGAGCTTGTTGTTTGTGTTGCGAACTCGTTCGATACCAAGTTCGAAGTGTTTGACCAAGACATGAACGTACTCGATACTTCTATCGTTGCTGCGGGCAAGACTGGTACACTCGAATTTTGGAAATACCCTGAGCATGTGTTGCGCTCTAACATCACTGTGCGAGTGACAGCTCCTATCGGATGTGATTGGTCGTACTTCGTGTACTGTCCTATTCAACCGCCTAAGATTAACGTAAGTGACTTCACCGTTCCTTATCGTTGCGTAACAATTGAAGGTGGTAACGATCAGCCGCCAGATTCAGACGTTCTGCCGTGGCAGCCAAACGCATGGGAACAGACAGGTGGTCGTGGTACTGGTCGCCCTGATGCTTCTCCTGTGTGGACACGCGACGGTAACTACATGAACATCTGGGGTGGTGTGAATGGTTGGTTCAAGTGGGGTAACTTCTTCACTAAGCCGATTAAGCAGATCACTTTCGTCTGGGTGTACGACGGCAGGAATGGTGGTTGGCATACTATTGATATCTACGAGCGAACTGCTGGCGAAGGCGCAGCACAGTCTCCGAGAAACAGTAGTGGTGTCTATCAGTATTTCACGTTTGACGTGAACATACCTGTAGGCCAAGAAATCTGGCTTCGTGTTCAAGGCGGCGGCGACCGCGGCGACTCGAACGATCTAGACTATCTGGGCATCACCAACGTAGTATTTGAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
e1b6c8bd5becded51df08f62ee768f768248aefbe626093166c68c0dd777b979
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,4267
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Jumbo Bacteriophages Are Represented Within an Increasing Diversity of Environmental Viruses Infecting the Emerging Phytopathogen, Dickeya solani Day,A.W., Ahn,J. and Salmond,G.P.C. 2018 — GenBank