Protein

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Genbank accession
YP_010661648.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect2
Probability 0,95
Protein sequence
MVDVTPIPPITPGSTNVGESITSANEAFTRIVEQGQAINGLLIDVGDKTDLQTTVKTDLVSAINEILTRFNDGFLVQSVTGDLTNLTTTNKSNLVSAVNEIVGNIGNLSSLSTSDKTSIVAAINEVVAENAGVGNLQNLSTIDKTNIVAAINELSFSIGAFSNLDGFQDIISAINSISDDAGDISTLTTVSKTSLVAAINELVTKTGLFVTKDGSVAFTGDVDFGTHKIKNLAAGTNSGDAVTVGQILDLVKIGDVAGLATSTKENTVLAINEVIGYIGQLNLLNTTTKTNIVAAINEIVDNIDYQDMQVKLSGINRVSFGYDITSDHDQTFDFRSSSVTGPSDFDFRVIREQGTNGVARLIQNGSGHMYLSTNDAVNGVIDRVRLNADVNNPFEIYKDGIWVAVATGGASLPLSGGTMTGPIQFDKTLSSNNILLDLQQGYGIYSDNTGTYTDSDRRLWIDGPGSGEIHIGPKTAGNLKGIELKTDRLDVTGEIFSSSDITLLSDARVKTDVETIEDAVNKVYAMRGVHYVKDGKFSTGLIAQELELVAPELVKDAGDLKSVNYQQLNAYLIEAVKDLVDQVNDLNKRIIELENNQ
Physico‐chemical
properties
protein length:597 AA
molecular weight: 63544,16560 Da
isoelectric point:4,39896
aromaticity:0,05360
hydropathy:-0,04439

Domains

Domains [InterPro]
DC_1369
ATT
1–80
DC_1369 DC_1369 DC_0811 IPR051577
DC_0811
STR
69–133
DC_0811 DC_0811 DC_0203
IPR030392
CHP
505–590
IPR030392
IPR030392
CHP
505–555
IPR030392 Coil
YP_010661648.1
1 597
Architecture
ATT
STR
ATT
STR
RBD
ATT 1-80 | STR 81-126 | ATT 127-169 | STR 170-438 | RBD 490-597
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Rhizobium phage RHph_I1_9
[NCBI] 		2509729 Uroviricota > Caudoviricetes > Pootjesviridae > Trinifflemingvirus > Trinifflemingvirus I19
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010661648.1 [NCBI]
Genbank nucleotide accession
NC_070885.1 [NCBI]
CDS location
range 7790 -> 9583
strand -
CDS
ATGGTTGACGTAACTCCAATCCCGCCGATTACTCCAGGCTCTACGAATGTAGGCGAATCGATCACGTCAGCGAACGAGGCTTTTACTCGTATCGTCGAACAAGGACAGGCTATCAATGGCCTTCTGATCGACGTCGGTGACAAAACCGATCTCCAGACTACTGTGAAGACTGATCTCGTCTCTGCGATCAACGAGATACTGACTCGGTTCAACGACGGATTTCTTGTCCAGAGTGTGACTGGCGATCTTACGAACCTGACGACTACTAACAAATCGAACCTCGTTTCAGCCGTAAACGAGATCGTCGGAAACATCGGCAATCTTAGCTCTCTGTCTACGTCAGACAAGACGAGTATCGTTGCAGCAATCAACGAAGTCGTTGCAGAGAATGCCGGTGTCGGCAATCTCCAGAACCTCAGCACGATCGACAAGACGAACATCGTAGCTGCGATCAACGAACTCTCCTTCAGCATCGGTGCATTCTCGAACCTCGACGGCTTCCAGGACATCATCTCTGCTATCAATTCGATCTCCGATGATGCAGGTGACATCAGTACTCTTACGACCGTCTCAAAGACGAGTCTGGTAGCTGCGATCAATGAACTTGTTACGAAGACTGGTTTGTTCGTAACGAAAGATGGCTCTGTTGCTTTCACTGGTGACGTCGACTTCGGCACTCACAAGATCAAGAACCTTGCTGCTGGTACGAACTCCGGTGATGCTGTTACTGTTGGTCAGATCCTAGATCTCGTGAAGATCGGTGACGTAGCAGGTCTCGCGACTTCTACGAAAGAGAATACCGTTCTTGCTATCAACGAAGTCATCGGATACATCGGTCAGCTCAATTTGCTGAACACGACTACGAAGACGAACATTGTTGCAGCTATCAACGAAATCGTCGACAACATCGATTATCAGGACATGCAGGTGAAGCTCTCTGGCATCAACCGTGTGTCGTTCGGTTATGACATTACCTCTGACCATGATCAGACGTTCGATTTCCGTTCGTCTTCAGTCACAGGTCCTTCCGACTTCGACTTCCGAGTCATTCGCGAACAGGGTACGAACGGTGTTGCTCGTCTGATCCAGAACGGATCTGGACATATGTACCTCTCGACGAACGATGCAGTCAATGGTGTCATCGATCGAGTTCGTCTGAACGCTGACGTGAACAATCCTTTCGAGATCTATAAGGACGGCATCTGGGTTGCTGTTGCTACAGGCGGTGCTTCGCTTCCTCTCTCCGGCGGAACGATGACTGGTCCTATCCAGTTCGATAAGACGTTGAGCTCAAACAACATCCTTCTCGATCTCCAACAGGGTTATGGCATCTACTCGGACAACACTGGAACGTACACCGACTCTGATCGTCGTCTTTGGATCGACGGTCCTGGCAGCGGCGAAATCCACATTGGTCCGAAGACTGCAGGCAATCTTAAGGGTATCGAACTCAAGACTGATCGTCTAGACGTCACAGGCGAGATCTTCTCTTCGAGTGACATCACTCTGCTTTCGGACGCTCGAGTGAAGACTGACGTCGAAACGATCGAGGATGCTGTCAACAAGGTGTATGCTATGCGTGGCGTGCATTACGTCAAGGATGGCAAGTTCTCGACTGGTCTTATCGCTCAGGAACTCGAACTAGTTGCACCCGAGCTTGTTAAGGACGCAGGCGATCTGAAGTCGGTAAACTACCAGCAGCTCAATGCTTACCTCATCGAAGCTGTAAAAGATCTCGTTGACCAGGTGAACGATCTCAACAAGCGTATCATCGAGCTGGAGAACAATCAGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
b657f36f97afa83e62e52a2ee31078377763eb08e0a02ce53b122ce5665006b2
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6735
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Patterns of diversity and host range of bacteriophage communities associated with bean-nodulatin bacteria Vann Cauwenberghe,J., Santamaria,R.I., Bustos,P., Juarez,S. and Gonzalez,V. 1998-01 — GenBank