Protein

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Genbank accession
AYP29599.1 [GenBank]
Protein name
distal tail protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MAVFQFNGYDLNDYFKLIKVSHDVGNERDITTDSAPKIGVNVQQVSFGAKKIKLTVSLATRDLNDNAFVDPNEPAQIDYNMFHHVREQAARVLHSDKPVELKLPDEPDRYYLAIVTGEASLKGISDWYDQAEIEFLVPDGVAHSTTYRSFENPKSVNEKLVFDLVNDGSVEAHPIITVKHNSENGYIGLVNSTGICELGDRLEANTEDYRHSEVLFDYASSNGEHRIPNGLAQGLKNVGISNDNINDTKPNGTLYIDNAWGRPHIALQSGQIASVTFDIPRDSNGEKGALYEYFWWRQIFWLGSANQMGYLKICVTDASGTFLYGVETFKRYNGLGCEYNFLASDGKGGFRIVDRKNFLGTHIEQHNPFNEPRGWSDIQRFDDVVQYYWWGSYPRYTIPEIKGKKSDKIHVIFGKVGNAPLITHMYLDDFIYRKDYVFGVRDIPNRYRAGGKVVIDSETDTVTVDNIPKIVDVVQGSDFLTIPPGKSQLEVYCSSWITTKPSVSVKFEERYI
Physico‐chemical
properties
protein length:512 AA
molecular weight: 57945,12530 Da
isoelectric point:5,37699
aromaticity:0,11914
hydropathy:-0,43262

Domains

Domains [InterPro]
DC_0077
STR
1–512
DC_0077
G3DSA:2.40.30.200
ATT
2–143
G3DSA:2.40.30.200 IPR054738
IPR008841
STR
11–137
IPR008841
IPR006520
Unmapped
83–143
IPR006520
AYP29599.1
1 512
Architecture
ATT
STR
ATT 1-143 | STR 144-512
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AYP29599.1
1 512
Domain Start End Length (AA) Confidence
N-terminal 1 206 206 0,9331
Central domain 207 405 200 0,1849
C-terminal 406 512 106 0,5321
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-206
Central
207-405
C-terminal
406-512

Taxonomy

  Name Taxonomy ID Lineage
Phage Streptococcus phage SW15
[NCBI] 		2419635 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Streptococcus thermophilus
[NCBI] 		1308 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Lactobacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AYP29599.1 [NCBI]
Genbank nucleotide accession
MH892364 [NCBI]
CDS location
range 14627 -> 16165
strand +
CDS
ATGGCCGTGTTTCAATTTAACGGATATGATTTGAATGATTACTTCAAACTAATCAAAGTGTCGCACGATGTTGGGAACGAACGTGATATCACTACAGACTCAGCCCCTAAAATTGGGGTTAATGTTCAACAAGTTTCGTTTGGTGCTAAAAAAATAAAATTAACTGTCAGCTTAGCAACTAGAGACCTTAACGATAATGCTTTCGTAGACCCAAACGAGCCCGCTCAAATTGATTACAACATGTTTCATCACGTAAGGGAACAAGCGGCTAGAGTGCTACACTCTGATAAACCGGTAGAATTGAAATTACCTGATGAGCCAGATAGGTACTATTTAGCGATAGTGACAGGAGAAGCTAGTTTGAAAGGTATCTCTGACTGGTATGACCAGGCTGAAATTGAATTCTTAGTACCTGACGGTGTTGCACATTCAACCACTTACCGAAGTTTCGAAAACCCCAAATCGGTAAATGAAAAGCTAGTATTTGACCTTGTTAACGATGGATCAGTTGAAGCTCATCCAATAATTACAGTGAAGCACAATAGTGAGAATGGCTATATTGGATTAGTTAATAGCACAGGTATCTGCGAGCTTGGGGACAGGTTAGAAGCAAATACAGAAGATTATAGACATTCAGAGGTACTTTTTGATTACGCTTCATCAAACGGAGAGCACAGAATCCCTAATGGATTGGCTCAAGGGTTGAAAAATGTTGGTATATCAAATGATAATATCAACGACACCAAGCCAAACGGAACTCTTTATATCGATAACGCTTGGGGTCGTCCTCACATTGCATTACAGAGTGGTCAGATAGCATCAGTTACATTTGACATCCCAAGAGACTCTAATGGTGAAAAAGGTGCGCTATATGAATACTTTTGGTGGAGACAAATTTTTTGGCTCGGCTCTGCAAACCAAATGGGATACTTAAAAATCTGTGTAACAGATGCAAGCGGCACTTTCTTGTATGGTGTTGAAACTTTTAAACGTTACAATGGTTTAGGTTGTGAATATAACTTCCTAGCCAGTGACGGTAAGGGAGGTTTCCGTATTGTCGACAGGAAGAATTTTTTAGGAACACATATCGAGCAGCACAACCCATTTAATGAACCTAGGGGATGGTCAGATATCCAAAGGTTTGATGATGTAGTTCAATACTACTGGTGGGGTTCTTATCCTAGATATACAATTCCTGAAATTAAGGGGAAAAAATCAGATAAAATTCATGTCATTTTCGGTAAGGTCGGCAACGCACCACTTATTACACACATGTATTTAGATGATTTTATATACCGAAAAGACTACGTTTTTGGTGTCAGGGATATCCCTAATAGATACCGCGCTGGTGGAAAAGTGGTAATAGATAGTGAAACTGATACCGTCACTGTAGATAATATTCCAAAGATTGTCGATGTTGTGCAAGGGTCTGACTTCCTCACAATTCCCCCTGGTAAGTCACAGCTAGAAGTCTATTGCTCGAGTTGGATAACAACTAAACCATCCGTATCTGTTAAATTTGAGGAGAGATATATATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
f93263e3e59fff8b673be42236c6da147f1435ca4ee47fd437a080f1aa5d6940
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8661
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Biodiversity of Streptococcus thermophilus Phages in Global Dairy Fermentations Lavelle,K., Martinez,I., Neve,H., Lugli,G., Franz,C., Ventura,M., Bello,F., Sinderen,D. and Mahony,J. 2018 — GenBank