Protein

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Genbank accession
QIQ64375.1 [GenBank]
Protein name
constituent protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MALERQEVKNPTGIVTDIAPADLPLDKWSFGNNVRFKNGKAQKALGHSPIFDTAQAPILDMFPFIRNNIPYWLLCSEKRLYLADGTTIIDVSPGPYSASVTNRWSVGSFNGVIFANDGVNPPHHLPPTESVFRVLPNFPANTTFRRLKSFKNFLVGLNVTSNSIEMPQMVWWSTSADAGGVPASWDPTDPTKDAGQNTLADTNGAIVDGVKLRDSFIIYKEDSVYSMRYIGGLYIFQFQQLFNDVGILGPNCAIEFDGNHFVVGHGDVYVHNGVQKQSVIDAQVRKFFFSDINPDNYQRTFVLADHVNTEMWVCYSSTRSEPGKHCDRAIIWNWKENTWSIRDLPNVLSGAYGIIDPKTSNLWDDDSNPWDTDTSVWGEGSYNPAKSSMIFTSFQDAKLFLFGETSTFSGQAFTSTLERSDIYLGDDRMMKTVSAVIPHITGNGVCNVWVGNAQVQGSGIRWKGPYPYRIGQDYKIDTKHVGRYIALKFDFASAGDWYFNGYTLEMAPKAGMR
Physico‐chemical
properties
protein length:513 AA
molecular weight: 57384,83970 Da
isoelectric point:5,71268
aromaticity:0,12865
hydropathy:-0,29922

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QIQ64375.1
1 513
Domain Start End Length (AA) Confidence
N-terminal 1 373 373 0,7591
Central domain 374 502 130 0,0866
C-terminal 503 513 10 0,9952
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-373
Central
374-502
C-terminal
503-513

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage Epa1
[NCBI] 		2719568 Uroviricota > Caudoviricetes > Bruynoghevirus >
Host Pseudomonas sp.
[NCBI] 		306 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QIQ64375.1 [NCBI]
Genbank nucleotide accession
MT108723 [NCBI]
CDS location
range 10745 -> 12286
strand +
CDS
ATGGCCCTAGAGAGACAAGAGGTCAAGAACCCAACGGGTATCGTGACTGATATTGCACCCGCTGACCTGCCCCTGGATAAATGGTCCTTCGGGAACAACGTCCGGTTTAAGAACGGTAAGGCTCAGAAGGCTCTGGGCCATTCCCCCATCTTTGATACTGCCCAGGCCCCTATCTTGGATATGTTCCCCTTCATTCGGAACAACATCCCATACTGGCTCCTGTGTTCAGAAAAGAGGCTTTACTTGGCAGATGGGACTACCATCATTGATGTGTCCCCAGGTCCATACTCTGCGAGTGTAACCAACCGGTGGTCTGTAGGCTCCTTCAACGGAGTTATCTTTGCTAACGATGGGGTTAACCCTCCTCACCACCTACCACCAACCGAGAGTGTGTTTAGGGTTCTACCTAACTTCCCAGCGAATACAACCTTTAGACGTCTTAAATCCTTCAAGAACTTCTTGGTTGGCTTGAATGTAACGTCTAACTCTATTGAAATGCCCCAGATGGTCTGGTGGAGTACCTCGGCTGATGCTGGTGGTGTACCGGCCTCTTGGGACCCAACAGACCCTACCAAAGATGCTGGACAGAACACCTTGGCTGATACCAATGGTGCTATCGTGGATGGTGTGAAGCTTCGTGACTCCTTCATCATCTACAAAGAAGACTCTGTATACTCCATGCGATATATTGGTGGTCTGTACATCTTCCAATTCCAGCAACTGTTTAATGACGTAGGTATCCTTGGTCCTAACTGCGCTATAGAGTTTGATGGTAACCACTTTGTTGTAGGTCATGGTGACGTCTATGTCCACAACGGTGTACAGAAGCAGTCCGTGATTGATGCTCAGGTCCGTAAGTTCTTCTTCTCGGATATCAACCCGGATAACTACCAACGGACTTTTGTGCTAGCTGACCACGTGAATACTGAAATGTGGGTATGCTATTCCTCGACTCGATCTGAGCCTGGGAAGCATTGTGATAGGGCTATCATCTGGAACTGGAAGGAGAACACTTGGAGTATCCGAGACCTCCCTAACGTTCTCAGTGGAGCCTATGGCATCATTGACCCTAAGACTTCTAACCTCTGGGATGACGACTCCAACCCCTGGGATACCGATACGTCGGTTTGGGGTGAAGGTTCGTATAACCCAGCAAAGTCTAGCATGATCTTCACGTCCTTCCAAGATGCTAAGCTCTTCCTCTTCGGGGAGACTTCTACATTCTCTGGGCAGGCATTCACAAGTACCCTTGAGAGATCCGATATCTATCTTGGGGATGACCGAATGATGAAGACCGTCAGTGCTGTTATCCCCCACATTACAGGGAACGGGGTATGCAACGTCTGGGTAGGTAATGCTCAGGTACAAGGGTCGGGTATCCGGTGGAAAGGTCCCTATCCGTACCGCATTGGGCAGGACTATAAGATTGACACCAAACATGTGGGCCGATACATTGCCTTGAAGTTTGACTTCGCCTCAGCAGGTGACTGGTACTTCAACGGATACACTTTGGAAATGGCCCCGAAGGCAGGTATGCGATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
1068e8828f30e86bdb01cd696580da80613bb2fcc774f848ccb5f357a18bc3dc
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8953
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete Genome Sequences of Nine Phages Lytic against Multidrug-Resistant Pseudomonas aeruginosa Farlow,J., Freyberger,H.R., He,Y., Ward,A.M., Rutvisuttinunt,W., Li,T., Jacobs,A.C., Nikolich,M.P. and Filippov,A. 2020-07-16 — GenBank