Protein

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Genbank accession
UJD05401.1 [GenBank]
Protein name
long tail fiber proximal subunit
RBP type
TSP
Evidence RBPdetect
Probability 0,50
Protein sequence
MSDLIKQHFRATNGLDAGGNKVINVAKADRNVMDDGVNVEYLIQENTIQPWANDRGYPEGFAVTMEKRIWVARADIAAPIPPAVNTFKQGEWISMRVDPKWEQYSSGTTELLPGTYANIDTRVNPVTLVLPKDKVEQGDTIVIRDIGGKPGINQALIKVQDSAAAMIFQGSILRELQMTRPYSMLLLTFTSAGWYVTLSDLSSLARTIDSTTLDAATDVGAQVQSSEYIVRYYTSNKKLTVRLPRYANHGDMITFAEPEGKTPLYHFTIKTYDANSSIGTEGTTSWTSKIKGGGVLIYDGPRKVWRINSIDMQQRIKIVTDDTVMQPNEAITIFGANNSTVKTISVTLPTQVAPGDTVRIGMNYMRKGQTVNIVTPSAPAGGTKDRIATTVNLLQFPKRSEYPPDAAWTQVDSLSFNGTSDYPPVLELAYVEATPNNYWIVSENIPSVERVDWTNDTTRARVGVIALATQANLEANSSNLVDGVAVTPHTLSKRTATEARTGIAAIALSTDVLQNSNYAFINDKIITPKRLNERTATETRRGLAEIATQAETDAGTDDTTIVSPKKLNARKATATLDGIIQLVNIGGTPATVNREDAGQGIYDHNDFSKAVTPKTLRGYKATEIASGCVWLAKDSEVRNPPAINSNIPLVVTPQSLHKKVADTGNIGFIQIATQAEVNAGTDNTKAVTPKTFNDRIASETLTGIARFATQKEFDENTGGGMMVSTSKISTFFNRPERVAVRTEAGLTQQGTLWGQLVLNIQVPTETQRGTPKIATQALVNAGTDDVDYLTSKKLQAKQSSESAFGISRFATQDEVNAGTVNNRTVSPVHLKYVIQTSADWRAQDNVRGTVRVANGDTAWTGNSTTGSDDKPKEVNGYAVSPNGLKQALANYLPLNAKADNSGLLNGLTSDQFIRRDIDQTVNGKLTLTKSTDFNSDVNVKGLGNFTGGEVKVFATSSTTNSHVRFLNSDGNERGIIYARPVAAGNSQQLTIRVKGSAPDTGKEFSFGNNGEFVAPDKLTSNGTIHSASDVNSNTVYRVKNASVIQLQDSDSVASFGNLAKKGRILTNDASQTQVTDNSGNYVILTTKNKDTILDTRYVKKGGDTMTGSLTINNASVVVNGSENWYKNDTSADTEKYMQPGSWTVEIKNASKLASLRGYMVPVREENPLIPGSMIVTGYEEKTAGGGLLAQFSVSSGYTYQTWTPYPKAGENSEKNYAHTMWTRVYNPLKGKFDEWMRVFTSATPPTAADIGAPSSVSTSVKTLEVQEWIKIGPVKIYPDRTSQTVKFEWVGD
Physico‐chemical
properties
protein length:1292 AA
molecular weight: 140299,44250 Da
isoelectric point:7,60360
aromaticity:0,07198
hydropathy:-0,39536

Domains

Domains [InterPro]
DC_1986
ATT
6–130
DC_1986 DC_1209
IPR048391
ATT
1140–1239
IPR048391
UJD05401.1
1 1292
Architecture
ATT
STR
ATT
STR
ATT 6-130 | STR 356-1139 | ATT 1140-1239 | STR 1240-1284 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
UJD05401.1
1 1292
Domain Start End Length (AA) Confidence
N-terminal 1 853 853 0,8099
Central domain 854 1053 201 0,2649
C-terminal 1054 1292 238 0,6557
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-853
Central
854-1053
C-terminal
1054-1292

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage PWKp16
[NCBI] 		2863266 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UJD05401.1 [NCBI]
Genbank nucleotide accession
MZ634347 [NCBI]
CDS location
range 26557 -> 30435
strand -
CDS
ATGAGCGACTTAATCAAACAGCATTTTAGAGCAACCAACGGGCTTGATGCTGGCGGAAACAAAGTAATCAACGTCGCTAAAGCCGATCGTAATGTGATGGACGATGGGGTCAACGTTGAGTATCTTATCCAAGAAAACACCATCCAGCCTTGGGCCAATGATCGTGGGTATCCTGAAGGCTTTGCGGTTACTATGGAAAAACGTATCTGGGTAGCACGTGCAGATATCGCGGCCCCGATCCCACCAGCAGTAAACACCTTTAAACAAGGTGAGTGGATTTCCATGCGTGTGGACCCGAAGTGGGAGCAGTATAGTTCAGGGACCACAGAACTTTTACCAGGGACCTATGCAAACATCGATACTCGTGTTAACCCGGTTACACTGGTTCTTCCTAAAGATAAAGTAGAGCAGGGTGATACGATTGTTATCCGTGACATCGGTGGTAAACCTGGCATCAACCAGGCACTAATTAAGGTACAAGACTCTGCGGCTGCCATGATTTTCCAAGGTAGTATCCTTCGCGAGCTGCAGATGACTCGTCCTTATAGTATGCTGTTGCTGACATTCACATCCGCAGGTTGGTATGTAACCCTTTCTGATCTGAGTTCTTTAGCCCGTACTATCGATTCTACTACATTGGATGCCGCTACCGATGTTGGTGCCCAAGTGCAGAGTTCTGAGTACATTGTACGTTATTATACTTCTAATAAAAAATTAACAGTTCGTCTTCCTCGTTATGCTAACCATGGTGATATGATTACCTTTGCTGAACCGGAAGGCAAAACACCATTATACCATTTTACCATTAAGACTTATGATGCAAATAGTTCTATTGGAACTGAAGGGACTACATCCTGGACATCTAAGATTAAAGGCGGCGGTGTTCTAATTTATGATGGCCCGCGCAAGGTATGGCGCATCAACTCTATCGACATGCAGCAACGTATCAAAATAGTTACTGACGATACTGTGATGCAACCTAATGAAGCCATTACTATATTCGGTGCTAACAACTCAACAGTAAAAACTATTTCTGTTACTTTGCCTACTCAAGTTGCTCCGGGTGATACTGTTAGAATCGGTATGAACTACATGCGCAAAGGACAAACAGTCAACATTGTTACTCCCTCTGCCCCGGCTGGCGGTACTAAGGATAGAATTGCAACAACAGTTAACTTACTTCAGTTCCCTAAACGCTCTGAGTATCCGCCTGATGCCGCGTGGACTCAAGTTGATAGTTTATCATTCAATGGAACTTCGGACTATCCTCCAGTCCTAGAGTTGGCCTATGTAGAAGCTACACCTAATAATTATTGGATCGTTTCGGAGAACATTCCTAGTGTAGAACGTGTTGATTGGACCAATGATACCACAAGAGCCCGTGTAGGCGTTATTGCGTTGGCTACCCAAGCTAATTTAGAGGCAAATAGTTCTAATTTGGTCGATGGTGTTGCTGTTACTCCGCATACCTTAAGTAAAAGAACAGCTACAGAAGCTCGTACTGGTATTGCTGCTATTGCATTAAGCACAGATGTTTTACAAAATAGTAACTATGCTTTTATTAACGATAAGATTATTACTCCTAAACGTCTTAATGAAAGAACTGCTACAGAAACGCGTAGAGGATTAGCTGAAATAGCTACCCAAGCCGAAACAGATGCTGGTACTGATGATACAACTATCGTAAGTCCTAAAAAGCTTAATGCTCGTAAAGCTACTGCTACACTTGATGGCATCATTCAACTGGTTAATATAGGCGGAACTCCTGCTACAGTAAATAGAGAAGATGCCGGTCAAGGAATTTATGACCATAATGACTTTTCAAAAGCTGTAACTCCTAAAACTCTTCGTGGGTATAAAGCTACTGAAATTGCTTCTGGTTGTGTATGGTTAGCTAAAGATAGTGAAGTCCGAAATCCACCGGCTATAAATTCTAATATCCCGTTAGTTGTTACACCGCAATCTCTTCACAAGAAAGTTGCAGACACGGGCAATATAGGATTTATCCAAATTGCCACTCAAGCAGAAGTTAACGCGGGTACAGATAACACTAAAGCAGTTACTCCTAAAACGTTTAACGATCGTATTGCTTCTGAAACTTTGACTGGTATTGCACGTTTTGCTACTCAAAAAGAATTTGATGAAAATACCGGCGGCGGTATGATGGTATCAACTTCTAAGATTTCTACGTTCTTTAATAGACCTGAACGAGTAGCGGTAAGAACAGAAGCTGGGTTAACCCAACAAGGAACTTTATGGGGACAGTTGGTTCTTAATATCCAGGTTCCAACGGAAACTCAACGTGGTACGCCTAAGATTGCAACTCAGGCGCTTGTCAATGCAGGAACTGATGATGTTGATTATTTGACATCTAAAAAGCTTCAAGCTAAACAATCGTCAGAATCAGCTTTTGGTATTTCTAGATTTGCAACTCAAGATGAAGTTAACGCCGGTACAGTAAACAATAGAACTGTTTCTCCAGTGCATCTGAAATATGTTATCCAGACTTCTGCCGATTGGCGAGCCCAAGATAACGTTCGTGGCACGGTTCGTGTAGCTAACGGCGATACTGCTTGGACTGGTAATAGTACTACTGGCTCTGATGATAAACCTAAAGAAGTTAATGGTTACGCAGTTTCACCTAACGGTTTAAAGCAAGCCTTAGCTAATTATCTTCCTTTGAATGCTAAAGCTGATAACTCTGGTTTATTAAATGGTCTTACTTCAGACCAATTTATTAGACGTGACATAGATCAAACCGTTAACGGTAAATTGACTCTTACCAAATCTACAGACTTTAATTCAGATGTCAATGTTAAGGGCCTTGGTAATTTTACCGGTGGCGAGGTTAAGGTATTTGCTACTTCGTCTACAACCAATTCTCACGTCAGATTTTTAAACTCAGATGGAAATGAACGTGGAATAATTTACGCTAGACCAGTAGCTGCAGGAAATTCTCAGCAGCTTACAATACGTGTTAAAGGTTCAGCCCCTGATACAGGTAAAGAATTTTCTTTTGGTAATAATGGCGAGTTTGTTGCACCTGATAAATTAACCTCTAACGGGACAATTCATTCTGCTTCAGATGTTAACTCAAACACTGTGTACCGTGTTAAAAATGCTTCAGTAATCCAACTCCAGGATTCTGATAGTGTAGCATCTTTTGGTAATCTTGCTAAGAAAGGAAGAATCTTAACAAACGATGCTAGCCAAACACAAGTTACCGACAACTCTGGAAATTATGTCATTTTAACCACTAAAAATAAGGATACCATTTTAGATACCAGGTATGTTAAAAAAGGTGGCGATACCATGACAGGTTCGTTAACAATAAACAACGCATCTGTTGTTGTTAACGGTTCTGAAAATTGGTATAAAAATGATACCTCTGCTGATACCGAAAAATACATGCAGCCGGGTTCTTGGACAGTAGAAATTAAAAATGCTTCTAAGCTAGCTTCGCTTCGTGGTTATATGGTGCCTGTCAGAGAAGAAAATCCTTTAATTCCTGGTTCTATGATTGTAACCGGCTATGAAGAAAAAACTGCAGGTGGCGGTTTACTTGCCCAATTTAGCGTTTCTTCTGGATACACCTATCAGACTTGGACTCCTTACCCTAAAGCTGGTGAAAATTCAGAGAAAAACTATGCCCACACAATGTGGACTAGGGTTTATAATCCACTTAAAGGCAAGTTTGATGAATGGATGCGCGTATTTACTAGCGCCACTCCTCCTACGGCTGCAGATATCGGTGCTCCGAGTTCAGTAAGTACTTCTGTTAAAACCTTGGAAGTTCAAGAATGGATTAAGATTGGCCCTGTCAAGATTTATCCTGATCGTACTTCTCAGACCGTTAAGTTTGAATGGGTAGGTGATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
14a99cbe01388123db9917b7f4b83ba2a75975fc2652a498746c9e774bbeedba
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,7769
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Lytic Bacteriophages against Mutidrug-Resistant Klebsiella pneumoniae: Development of an Effective Phage-based Approach to Combat Multidrug Resistance Martins,W.M.B.S., Cino,J., Li,M., Lenzi,M.H., Sands,K., Portal,E., Mathias,J., Hansan,B., Dantas,P., Migliavacca,R., Hunter,J.R., Medeiros,E.A., Gales,A.C. and Toleman,M.A. 2021 — GenBank