Protein

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Genbank accession
AGN34400.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MKYYPPYGSTDPDAPYVDKDVPGAVRGSAVPAKAIERPQREIVDFLLKSGLIPSDANQLAQAVQTGKVNFAVAAGTANALTVTLSPAPPALVAGMCIRVKIGATNTDAATLDVNGLGPSAIQTKFGAPISRGALPLGSVSTFVFDGAAWRLADLALSDVPMNFGQCRLSVQSATALLLSPYSGNSLMINGSPVKIPSGGVALTNAGLSANTVYNVYAFVSGGTLTLEASAAAHSTDPSTGVEIKTGDPLRTLVGKIRTNATSNFADTTNYRGCINWFNRRQLNVTGGSGTNSTSSTAYIDMGGPISCSFLTWGDEALFSVVNGFARSDTVGGGANISLTLDGVQGFGSDSGMQASTAGFNQAIISTASYTPAEGWRTLSYVGRTGGSGNMIVTMAIQTIVRG
Physico‐chemical
properties
protein length:402 AA
molecular weight: 41217,96090 Da
isoelectric point:7,59672
aromaticity:0,07214
hydropathy:0,09726

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Rhizobium phage RR1-A
[NCBI] 		929833 No lineage information
Host Agrobacterium tumefaciens
[NCBI] 		358 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Alphaproteobacteria > Hyphomicrobiales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AGN34400.1 [NCBI]
Genbank nucleotide accession
JF974314.1 [NCBI]
CDS location
range 17985 -> 19193
strand +
CDS
ATGAAGTATTATCCTCCATACGGATCGACTGATCCGGATGCACCTTATGTTGACAAGGACGTACCAGGCGCCGTGCGTGGTTCCGCCGTCCCTGCGAAAGCGATCGAGCGGCCGCAGAGAGAGATTGTAGACTTCCTTCTCAAGTCTGGTCTCATTCCTTCAGATGCAAACCAACTGGCGCAGGCGGTCCAAACAGGCAAGGTTAATTTCGCTGTTGCTGCAGGAACTGCAAATGCCTTGACAGTGACGCTCTCGCCAGCGCCGCCAGCGCTTGTTGCTGGTATGTGCATCAGAGTAAAAATCGGTGCAACGAATACCGATGCTGCAACCCTCGATGTAAATGGTCTTGGCCCATCCGCCATACAGACGAAATTTGGGGCACCAATTTCGCGCGGCGCTCTTCCTCTAGGATCCGTGTCCACGTTTGTTTTTGATGGAGCAGCATGGCGTCTCGCTGATTTGGCGCTTTCAGATGTTCCAATGAACTTTGGGCAATGCCGCCTTTCGGTTCAGTCAGCCACAGCTCTGTTGCTCTCGCCGTATTCCGGCAATTCGCTGATGATTAACGGCAGTCCTGTAAAAATTCCATCTGGCGGAGTGGCGCTCACCAACGCTGGTCTGTCAGCTAATACGGTCTATAACGTCTACGCCTTTGTGTCGGGTGGAACTTTAACGCTAGAGGCTTCGGCAGCAGCACATTCGACAGATCCGTCAACCGGTGTTGAGATCAAGACGGGCGATCCGTTGAGAACGCTAGTTGGTAAAATCCGCACTAACGCGACATCCAATTTCGCGGATACGACTAATTACCGGGGATGCATCAACTGGTTCAATCGTCGTCAGCTGAACGTCACTGGTGGCTCTGGTACCAACAGCACTTCCTCGACCGCGTACATCGACATGGGTGGGCCGATATCATGTTCATTCCTGACGTGGGGTGACGAGGCGCTATTCAGCGTCGTCAATGGCTTTGCGAGAAGCGATACGGTGGGCGGCGGAGCCAACATATCTCTGACGTTGGATGGCGTGCAGGGGTTTGGCTCCGACAGCGGCATGCAGGCTTCAACCGCAGGCTTCAACCAGGCCATTATTTCGACAGCGTCTTACACGCCCGCCGAGGGGTGGAGAACCCTTAGCTACGTAGGACGCACTGGTGGCTCCGGAAACATGATCGTCACGATGGCAATCCAGACGATTGTAAGGGGATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
983f11ff4bed7a13ab498c58634824046475c2c9e8774514560024816ca8d1a4
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8636
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The Genome Sequence of Rhizobium phage RR1-A Henn,M.R., Engelen,B., Levin,J., Malboeuf,C., Casali,M., Russ,C., Lennon,N., Chapman,S.B., Erlich,R., Young,S.K., Yandava,C., Zeng,Q., Alvarado,L., Anderson,S., Berlin,A., Chen,Z., Freedman,E., Gellesch,M., Goldberg,J., Green,L., Griggs,A., Gujja,S., Heilman,E.R., Heiman,D., Hollinger,A., Howarth,C., Larson,L., Mehta,T., Pearson,M., Roberts,A., Ryan,E., Saif,S., Shea,T., Shenoy,N., Sisk,P., Stolte,C., Sykes,S., White,J., Haas,B., Nusbaum,C. and Birren,B. 2011-09-23 — GenBank