Protein

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UniProt accession
Q0PDK6 [UniProt]
Protein name
Tail spike protein
RBP type
TSP
Evidence UniProt/Swiss
Probability 1,00
Protein sequence
MRSLSKNIWIMSNFEVLLTTLTGDRDAGGCRYWNGSFEEPLSPGETATYQFYADASHPNSKYVINDNKVIFKEPEQFGGDYRMFTIIDTELGRSEQDGRYIIATCEPAWYELDDDFIENKRPTDKTPQEALDLLLEGTRYEGEVDPDLQMRASDSFYQVSVKEAVIQFFQTWGGYFKDTIEFDGNEITRRVIKSLKRRGAANGVRFEHDKDITSIRRNITGYPKTALYPYGASLEMTDEDGNATGGYTRYIDIKDVVWSKAAGDPVDKPAGQAWIGDPDLLKVFGRPMPDGSLRHRWTRWQNEDITTPEELIEAAYYDLINNVSKAIVNYNVEVAPKNVKLGDTCIILDREFATPIELEADVIKMTYFTDRPEEGATIELGEYLNLDDIERQIGAINDRFKKNEGKWNTGGGITEVTDGAFPDKKPPKPSNITVKSMFQSIFLSWNYDPSSYIAGYRVYASKTPGFTPTDNDIIFEGKMSGYEHKVGNNETWYYRLSTVNYHKTESDMSDQYSAQSERIMNDDILFGAITADKLANLAVTADKISRSFDEGNIFPGSLLKPSQFYDYPNTKHSVTDKTFNELTITQVIDDSTRLRFGISGQNKAPNNIQRMPLEQGQIYTLSFEVKRNNTTDLSYIHLKKPDNTFMLLSSSLKDISAYPSDEFVRVDLQFTAPETSSKFTLGFGGYNRNGNVTPCSFVIRKVQVRKGTEIKDYGYSPYDIMLVDGAIYSDYIQSAAINSAHIADAAIGSAAIQNAAIKNAHLGTAIVDTANIKDAAITSAKIKELSADLITSGTINAINITGSLIRGGRFEPLNESSAYTSYIEGDKIYQRVNTINYGGTPKKTYNDLTITSGGVTMVYGGRDTGTDEPLREMTLRDGSLYMSGNKNDTGYSEIQMYCNDDDVVNAPKSIFRQKLGGVNRMSLHSYYNSVPGSYNVQMDTRNTSIYSHFANGWQLTADGKIMIMSKNGQGIYLDPSNDNVAGQVTMHVGNAGQAGGLIQPVIAGAPHYSITDIHGALQTNMSVMLYQYNFVMPSKGDAYASKYNDIPPPFECENIFMVVPTVFGGYSDHVHATITSQSSSGFRCYVRGTGSSTGILGRTFQVRFLIFYEVN
Physico‐chemical
properties
protein length:1111 AA
molecular weight: 123951,03300 Da
isoelectric point:5,08831
aromaticity:0,10801
hydropathy:-0,45788

Domains

Domains [InterPro]
DC_1956
STR
1–644
DC_1956
IPR007119
Unmapped
79–279
IPR007119 IPR013783 DC_0140
IPR010572
ENZ
109–381
IPR010572 G3DSA:2.60.120.260
Q0PDK6
1 1111
Architecture
STR
STR 1-995 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
Q0PDK6
1 1111
Domain Start End Length (AA) Confidence
N-terminal 1 557 557 0,9167
Central domain 558 810 254 0,5265
C-terminal 811 1111 300 0,6853
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-557
Central
558-810
C-terminal
811-1111

Taxonomy

  Name Taxonomy ID Lineage
Phage Bacillus phage SPP1
[NCBI] 		10724 Uroviricota > Caudoviricetes > Trautnerviridae > Rivavirus > Rivavirus SPP1
Host Bacillus subtilis
[NCBI] 		1423 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
CAL18688.1 [NCBI]
Genbank nucleotide accession
X97918 [NCBI]
CDS location
range 16125 -> 19460
strand +
CDS
GTGAGAAGCTTGTCAAAAAACATATGGATAATGAGCAACTTTGAAGTGCTTTTAACCACTCTGACGGGGGATAGGGACGCCGGAGGGTGTAGGTACTGGAATGGATCGTTTGAGGAGCCTCTTTCGCCCGGAGAAACGGCCACGTACCAATTTTACGCAGATGCAAGCCATCCTAATAGTAAGTATGTGATTAATGACAATAAAGTCATATTCAAAGAGCCGGAACAATTCGGCGGAGATTACAGAATGTTCACCATTATAGATACGGAGCTAGGGCGATCTGAACAAGACGGCAGATATATCATAGCCACTTGTGAACCTGCTTGGTACGAGTTGGATGATGACTTTATCGAGAATAAGCGCCCTACCGATAAAACGCCGCAGGAGGCCCTAGATTTACTTTTAGAGGGAACCCGGTATGAAGGTGAAGTCGATCCAGATTTACAAATGAGGGCGTCAGATAGTTTTTATCAAGTGTCTGTAAAAGAGGCCGTCATCCAGTTTTTCCAAACATGGGGCGGCTACTTCAAAGATACAATCGAATTTGACGGAAACGAGATAACAAGACGTGTTATAAAGAGCTTGAAAAGACGCGGCGCCGCTAACGGCGTCCGTTTTGAACATGACAAGGATATAACAAGCATCAGAAGAAATATCACAGGGTACCCGAAAACGGCATTGTACCCATACGGAGCTAGTCTGGAAATGACAGATGAGGACGGCAACGCCACAGGTGGCTACACACGATACATAGACATCAAAGACGTTGTCTGGAGCAAAGCGGCTGGAGACCCTGTGGACAAGCCAGCGGGCCAAGCGTGGATAGGTGACCCGGATTTATTGAAAGTGTTCGGTCGTCCTATGCCAGATGGTTCCCTCCGTCATCGTTGGACACGCTGGCAAAATGAGGATATCACGACACCGGAAGAACTGATTGAGGCGGCTTACTATGACTTGATCAACAACGTTTCAAAGGCGATCGTCAACTATAACGTTGAGGTTGCGCCCAAGAACGTAAAGCTTGGCGACACCTGTATTATCCTAGACCGAGAGTTTGCTACGCCGATAGAATTAGAGGCTGATGTCATTAAAATGACGTATTTCACGGACAGGCCAGAAGAAGGCGCAACAATTGAGTTGGGTGAGTATCTTAATTTGGATGATATCGAAAGACAGATCGGGGCCATTAATGACCGTTTCAAGAAGAATGAGGGCAAATGGAACACAGGCGGAGGAATCACAGAAGTTACCGATGGAGCTTTCCCGGATAAAAAGCCGCCTAAGCCATCTAACATAACGGTTAAATCTATGTTCCAGAGTATTTTTCTATCTTGGAACTATGACCCATCCAGCTACATCGCAGGGTACAGGGTTTACGCTTCGAAAACGCCGGGATTTACACCGACGGACAATGACATAATTTTTGAAGGGAAAATGAGCGGATACGAGCACAAGGTAGGGAATAATGAAACGTGGTACTACCGTTTATCGACCGTTAACTATCACAAGACGGAAAGCGACATGTCCGACCAATATAGCGCCCAATCAGAAAGAATAATGAATGATGACATTTTATTCGGAGCGATCACGGCGGACAAGTTGGCGAATTTAGCAGTAACAGCGGACAAAATTTCACGTAGCTTTGATGAAGGGAATATATTTCCGGGTTCGTTATTGAAGCCATCTCAGTTTTACGACTATCCAAACACAAAGCATTCAGTAACAGATAAAACATTTAATGAATTGACCATTACACAGGTTATAGATGATTCAACAAGGCTACGATTTGGTATAAGCGGCCAAAATAAAGCGCCTAACAATATTCAAAGGATGCCGCTAGAACAGGGGCAGATATATACATTATCGTTTGAAGTAAAGAGGAACAATACGACGGATTTAAGTTATATACACTTGAAAAAGCCAGACAATACATTCATGCTTTTGAGCAGTTCATTGAAAGATATTTCCGCGTATCCATCTGATGAATTTGTAAGAGTTGATCTACAGTTCACAGCGCCGGAAACGTCATCTAAATTTACATTGGGGTTTGGAGGATACAACCGAAACGGAAACGTAACGCCTTGCAGTTTCGTCATTCGTAAGGTTCAGGTCAGAAAAGGAACCGAGATTAAAGATTATGGTTACAGCCCTTATGATATTATGCTTGTTGATGGAGCTATCTACAGTGACTATATTCAATCCGCCGCTATTAATTCCGCCCATATCGCAGATGCGGCAATTGGTTCGGCGGCCATTCAGAACGCGGCCATCAAAAACGCCCATTTAGGTACAGCTATTGTCGATACCGCAAACATCAAAGATGCGGCCATCACGAGCGCCAAGATTAAAGAATTGTCTGCCGATTTGATTACGTCCGGGACAATCAACGCAATCAATATCACGGGTTCCCTAATTCGTGGTGGTCGTTTCGAGCCGTTGAATGAATCGTCCGCATACACTTCGTACATCGAAGGTGACAAGATTTATCAGCGTGTGAATACTATCAACTATGGCGGAACGCCAAAAAAAACATATAACGATTTAACAATAACGAGCGGCGGCGTCACAATGGTATACGGAGGGCGAGACACCGGGACAGATGAGCCACTAAGGGAAATGACACTAAGAGACGGTTCGTTATATATGTCAGGAAATAAAAACGATACTGGTTATTCTGAAATACAAATGTATTGTAATGACGATGACGTTGTAAATGCGCCTAAATCTATTTTCAGACAAAAATTAGGCGGAGTGAATAGGATGTCATTGCATTCATATTACAATAGCGTACCCGGATCATATAATGTTCAAATGGACACAAGGAATACTAGCATATATTCTCATTTCGCTAACGGGTGGCAACTAACAGCGGATGGGAAAATCATGATAATGTCAAAAAACGGTCAGGGAATATATTTAGACCCGTCGAATGACAACGTCGCCGGACAAGTGACAATGCACGTCGGAAATGCCGGACAAGCTGGTGGGCTTATACAACCAGTAATAGCAGGCGCACCACACTACTCAATCACAGATATACACGGAGCCTTGCAAACTAACATGTCAGTCATGCTATATCAATATAACTTTGTTATGCCAAGTAAAGGAGACGCTTACGCCTCAAAATATAATGATATACCTCCGCCTTTTGAGTGTGAAAACATCTTCATGGTTGTTCCGACAGTATTCGGCGGATATTCTGACCACGTTCACGCAACAATCACCTCGCAATCATCATCGGGTTTTCGTTGTTATGTGAGGGGGACAGGTAGTTCTACAGGTATTCTAGGACGTACTTTTCAGGTTAGATTTTTAATTTTCTATGAAGTGAACTAA

Genome Context

Genome Context

Gene Ontology

Description Category Evidence (source)
GO:0098024 virus tail, fiber Cellular Component IDA:UniProtKB (UniProt)
GO:0098670 entry receptor-mediated virion attachment to host cell Biological Process IEA:UniProtKB-KW (UniProt)
GO:0099001 symbiont genome ejection through host cell envelope, long flexible tail mechanism Biological Process IEA:UniProtKB-KW (UniProt)
GO:0019062 virion attachment to host cell Biological Process IDA:UniProtKB (UniProt)

Tertiary structure

PDB ID
b8e0d5698939124dc5ecec53e8a9394afacde60bb2de87e31b4a90455b765769
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6526
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
— — 9434185 PubMed