Protein

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Genbank accession
WOR80499.1 [GenBank]
Protein name
structural protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MALERQEVKNPTGIVTDIAPADLPLDKWSFGNNVRFKNGKAQKALGHSPIFDTAQAPILDMFPFIRNNIPYWLLCSEKRLYLADGTTIIDVSPGPYSASVTNRWSVGSFNGVIFANDGVNPPHHLPPTESVFRVLPNFPANTTFRRLKSFKNFLIGLNVTSNSIEMPQMVWWSTSADAGGVPASWDPTDPTKDAGQNTLADTNGAIVDGVKLRDSFIIYKEDSVYSMRYIGGLYIFQFQQLFNDVGILGPNCAIEFDGNHFVVGHGDVYVHNGVQKQSVIDAQVRKFFFSDINPDNYQRTFVLADHVNTEMWVCYSSTRSEPGKHCDRAIIWNWKENTWSIRDLPNVLSGAYGIIDPKTSNLWDDDSNPWDTDTSVWGEGSYNPAKSSMIFTSFQDAKLFLFGETSTFSGQSFTSTLERSDIYLGDDRMMKTVSAVIPHITGNGVCNIWVGNAQVQGSGIRWKGPYPYRIGQDYKIDTKHVGRYIALKFDFASAGDWYFNGYTLEMAPKAGMR
Physico‐chemical
properties
protein length:513 AA
molecular weight: 57428,89230 Da
isoelectric point:5,71268
aromaticity:0,12865
hydropathy:-0,30312

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WOR80499.1
1 513
Domain Start End Length (AA) Confidence
N-terminal 1 374 374 0,7582
Central domain 375 502 129 0,0883
C-terminal 503 513 10 0,9951
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-374
Central
375-502
C-terminal
503-513

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage PSP30
[NCBI] 		3077135 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas aeruginosa PAO1
[NCBI] 		208964 Bacteria > Proteobacteria > Gammaproteobacteria > Pseudomonadales > Pseudomonadaceae > Pseudomonas

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WOR80499.1 [NCBI]
Genbank nucleotide accession
OR538763 [NCBI]
CDS location
range 34266 -> 35807
strand -
CDS
ATGGCCCTAGAGAGACAAGAGGTCAAGAACCCAACGGGTATCGTGACTGATATTGCACCCGCTGACCTGCCCCTGGATAAATGGTCCTTCGGGAACAACGTCCGGTTTAAGAACGGTAAGGCTCAGAAGGCTCTGGGCCATTCCCCCATCTTTGATACTGCCCAGGCCCCTATCTTGGATATGTTCCCCTTCATTCGGAATAACATCCCATACTGGCTCCTGTGCTCAGAAAAGAGGCTTTACCTGGCAGATGGGACTACCATCATTGATGTGTCCCCAGGTCCATACTCTGCGAGTGTAACCAACCGGTGGTCTGTAGGTTCCTTCAATGGAGTTATCTTTGCTAACGATGGGGTTAACCCTCCCCACCACCTACCACCAACTGAGAGTGTGTTTAGGGTTCTACCTAACTTCCCAGCGAATACAACCTTTAGACGTCTTAAGTCCTTCAAGAACTTCTTGATTGGATTGAATGTAACGTCTAACTCTATTGAAATGCCCCAGATGGTCTGGTGGAGTACCTCAGCTGATGCTGGTGGTGTCCCGGCCTCTTGGGACCCAACGGACCCTACCAAAGATGCTGGACAGAACACCTTGGCTGATACCAATGGTGCTATCGTGGATGGTGTGAAGCTTCGTGACTCCTTCATCATCTACAAAGAAGACTCTGTATACTCCATGCGATATATTGGTGGTCTGTACATCTTCCAATTCCAGCAACTGTTTAATGACGTAGGTATCCTTGGTCCTAACTGCGCTATAGAGTTTGATGGTAACCACTTTGTTGTAGGTCATGGTGACGTCTATGTCCACAACGGTGTACAGAAGCAGTCCGTGATTGATGCTCAGGTCCGTAAGTTCTTCTTCTCGGATATCAACCCGGATAACTACCAACGAACCTTTGTGCTAGCTGACCATGTGAATACTGAAATGTGGGTATGCTACTCCTCGACTCGATCTGAGCCTGGGAAGCATTGCGATAGGGCTATCATTTGGAACTGGAAGGAGAACACTTGGAGTATCCGAGACCTCCCCAACGTCCTCAGTGGAGCCTATGGCATCATTGACCCTAAGACTTCTAACCTCTGGGATGACGACTCCAACCCCTGGGATACCGATACGTCGGTTTGGGGTGAAGGTTCGTATAACCCAGCGAAGTCTAGTATGATCTTCACGTCCTTCCAGGATGCTAAACTCTTCCTCTTCGGGGAGACTTCTACGTTCTCTGGACAATCATTCACGAGTACCCTTGAGAGATCCGATATCTACCTTGGGGATGACCGAATGATGAAGACCGTCAGTGCTGTTATACCTCACATTACAGGCAATGGAGTATGTAATATTTGGGTAGGTAATGCCCAGGTACAAGGCTCAGGTATCCGATGGAAAGGGCCTTACCCGTACCGTATTGGGCAGGACTATAAGATTGACACCAAGCATGTGGGCCGATACATTGCCTTGAAGTTTGACTTCGCCTCAGCAGGTGACTGGTACTTCAATGGATATACTTTGGAAATGGCCCCGAAGGCAGGTATGCGATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
873e649cdc6f7bab481af6ff8c942add6f9061590e83c7f2248a671c06b9e3b3
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8940
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Exploiting Phage-Antibiotic Synergies to Disrupt Pseudomonas aeruginosa PAO1 Biofilms in the context of Orthopedic Infections De Soir,S. and Wagemans,J. 2024-01-11 — GenBank