Protein

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Genbank accession
GENB_c8f4f0c44693 [GenBank]
Protein name
tail spike protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MACNNSIDRPIDSFIKYFIGDAKPYHTKILEIVERYVFRESIDVSVEETTNMTIGLKNTPGCTAVGFGVDYDSDCGFDALSCCDLFQCMGGFGLIFDNSDLLNTYNVVSTDAITGEIVVEGEHIYDTYLNVTSLPDLNTIVVAGDQSNYFRSHELFWMVRKQSAEVMFKAGNLLVIKGDYVGLLRQKKVIELMNSGRDDGIYNVINVSRSGNNTTITVDRPFESELYFGQAIIQTNNKNNGVYQLESFEVKPDGTYLHLYEGTPLRFDDSDLEGGYGSIMLRTGLIPDRRAWLDNTSNPDNNREWKIVQVRYDIENENTIVVVDGTLAESTGGVLNMYGYETGAGFDGANECSKPNPFTVHASISEFLKINVYDGPIPSPTPSPTISPTPTLTPTQTPSFGVTITPTPSSSLTPTPTASETITPTPSVTPTQTPSQGASPTPTATKSVTPTPSASITPTNSLTPTPTPSMTATPVLCEKTPFDYATISTYWTMANGEDFDPHLSLTDPARNILVGWNRVDHDEDYIVWAGDDQKTPGVESFLLNMNSIKSQYDMNEIQFKLSGFWYTRVHDGNVRVVISIWSGGRMTQSGHNWVNIVGEGKNARVMPPKDSFEFFVNTDKTVLDVENTGVYGDDMAYITYDFCKGFFFPTILRPAVTPTPAPTPSNTPTPSNTVTPSITVTPTISVTPTITPTISNTQTPSPTAQSTPTASSAPTPPVTPSNTPTPSLSNTPSITVTPTISVTPSAPPSRTPDATPSLTAPVTPTQTPSNTATPSAPPSRTPDQTPSVTAPVTPTQTPTPTQTPSAPPTRTPDATPTNTPTNSATPSTTVSLTPSITPTPETTKSLTPTITPTLSNSSTATATPTPTSDPTPTQTPTPTSTPAVSPVYVDLNYSPAGLDGEMT
Physico‐chemical
properties
protein length:903 AA
molecular weight: 97032,79500 Da
isoelectric point:4,50412
aromaticity:0,07641
hydropathy:-0,35094

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
GENB_c8f4f0c44693
1 903
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,4690
Central domain 11 306 297 0,9033
C-terminal 307 903 596 0,0939
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-306
C-terminal
307-903

Taxonomy

  Name Taxonomy ID Lineage
Phage Stenotrophomonas phage CM1
[NCBI] 		2998841 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
OP883945.1_CDS_[complement(231526..234237)] [NCBI]
Genbank nucleotide accession
OP883945.1 [NCBI]
CDS location
range 231526 -> 234237
strand -
CDS

  




        

        
      
    
  






  

  
  

    
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Tertiary structure


  



  

    

      
        
          
            
              

                

                  

                    

                      
PDB ID

                      
fb174727dc2b09ec3e4e16097bda718eae82925996278f01753e9b74616ddd2b

                    

                    
                      ColabFold
                    
                  

                  

                  

                    

                      Source
                      ColabFold
                    

                    

                      Method
                      ColabFold
                    

                    

                      Resolution
                      0,3082
                    

                    

                      Oligomeric State
                      monomer
                    

                    
                  

                  

                    
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Model Confidence

                      

                        

                          

                          Very high
pLDDT > 90
                        

                        

                          

                          High
90 > pLDDT > 70
                        

                        

                          

                          Low
70 > pLDDT > 50
                        

                        

                          

                          Very low
pLDDT < 50