Protein

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Genbank accession
AGE60393.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence RBPdetect
Probability 0,89
TF
Evidence RBPdetect2
Probability 0,95
Protein sequence
MAARQVAADATIEQLRTTFNTLSATDFGDISALNSSISASNLVAAMNELEGEVTPFSAAFIATQTDLGAAPATGDSIVIRDADASALKEMTIANLFTSPAIDTITAGTFTLDASADVNIDAGGGDIILKDDGTEFGRLTNNAGQLLIKSSSSATTALSLNGANVTVAGNLTVSGTTTTVDSSTVNLQTGFIFEGSSADSFETTLTATDPTADRTITLPDLTGTVSLTSATETLTNKTLTSPVLTTPIFTGATDQRGSFVFEGSTADSFETTVSVVDPTADRTINFPNVSGTVLTTGNFSDITAIGVQSGSIVFEGSTANSFETTLAVTDATADRTITLPDLTGTVSLTTATETLTNKTLTTPVIVEATSGSTITLNATTDIVLDADGGDVFFKDDGTTFGSATNTSGNLIIKSGTTTALTFSGANVAAAGTLSATTITASTGLETKNGATGAGFVKFFEDSDNGTNAVTLLGPASTGDIDITLPTQAGTVVVSNTTDGNDVQLDSLGLNTAASGTAGELRATNDITAFYSSDVSLKENIVEIPSALDMVDKIRGVFFDWKDDYIESKGGEDGYFMRKHDVGLIAQEVEAVLPEIVGTRKDGIKAIKYDRLTALLLQAIKELQAKIK
Physico‐chemical
properties
protein length:626 AA
molecular weight: 64290,23190 Da
isoelectric point:4,08140
aromaticity:0,05431
hydropathy:0,07476

Domains

Domains [InterPro]
DC_0405
STR
2–626
DC_0405
IPR036388
RBD
524–624
IPR036388
IPR030392
CHP
531–626
IPR030392
IPR030392
CHP
531–595
IPR030392
AGE60393.1
1 626
Architecture
STR
STR 2-626
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pelagibacter phage HTVC008M
[NCBI] 		1283076 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Candidatus Pelagibacter ubique HTCC1062
[NCBI] 		335992 Bacteria > Proteobacteria > Alphaproteobacteria > Pelagibacterales > Pelagibacteraceae > Candidatus Pelagibacter

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AGE60393.1 [NCBI]
Genbank nucleotide accession
KC465899 [NCBI]
CDS location
range 44145 -> 46025
strand +
CDS
ATGGCAGCAAGACAAGTAGCAGCAGACGCAACGATAGAACAATTAAGAACAACTTTTAATACTCTATCAGCAACAGACTTTGGTGATATATCTGCTTTAAATTCATCTATTAGTGCAAGTAACCTTGTAGCGGCGATGAACGAGTTAGAAGGTGAAGTAACTCCTTTCTCAGCAGCTTTTATTGCAACACAAACAGATTTAGGTGCCGCTCCAGCAACTGGTGACAGTATAGTTATTAGAGACGCTGATGCTAGTGCATTGAAAGAAATGACTATTGCTAATTTATTTACTAGTCCAGCAATAGATACAATTACTGCCGGTACATTTACACTAGACGCTTCAGCAGATGTTAATATAGACGCTGGTGGCGGAGATATTATTTTAAAAGATGACGGTACTGAATTTGGTAGATTAACAAACAATGCAGGTCAATTATTAATTAAATCAAGTTCAAGTGCTACAACAGCATTATCATTAAATGGTGCCAATGTTACTGTTGCAGGTAACTTAACAGTATCAGGTACTACAACAACTGTGGATTCATCTACTGTTAATTTACAGACTGGATTTATATTTGAAGGTTCAAGTGCTGATAGTTTTGAAACAACATTAACAGCAACTGACCCAACAGCAGATAGAACAATTACTTTACCAGATTTAACAGGTACAGTATCATTAACGAGTGCAACAGAAACTTTAACAAATAAAACTTTAACATCACCAGTTCTTACAACACCTATATTTACAGGTGCAACTGACCAAAGAGGTTCATTTGTATTTGAAGGTAGTACAGCAGACAGTTTTGAAACAACTGTAAGTGTTGTTGACCCAACAGCAGATAGAACAATAAACTTTCCAAATGTTTCTGGTACTGTTTTAACAACAGGTAATTTTTCTGATATTACAGCAATAGGTGTTCAATCAGGATCAATTGTATTTGAAGGTTCAACAGCAAACAGTTTTGAAACAACTTTAGCAGTAACAGACGCTACTGCTGATAGAACAATTACATTACCAGATTTAACTGGTACAGTTTCTTTGACTACAGCAACTGAAACATTAACAAATAAAACACTTACAACTCCAGTAATCGTTGAAGCTACTTCAGGTTCAACTATAACACTTAACGCTACAACTGATATTGTATTAGACGCTGATGGCGGTGATGTGTTCTTTAAAGATGATGGAACAACTTTTGGTAGTGCAACAAACACTTCAGGTAACTTGATTATCAAATCAGGTACTACAACAGCATTAACATTTAGTGGTGCTAATGTTGCAGCTGCAGGTACATTAAGTGCAACAACAATTACTGCTTCTACTGGACTAGAAACAAAAAATGGTGCTACTGGTGCCGGTTTTGTTAAGTTCTTTGAAGATAGTGATAACGGTACTAACGCTGTAACACTTTTAGGTCCTGCTTCAACAGGTGATATTGATATTACATTACCAACTCAAGCAGGTACAGTTGTTGTTTCTAATACAACTGATGGTAATGATGTTCAACTAGATAGTTTAGGATTGAATACTGCTGCCTCTGGTACTGCTGGAGAGTTGAGAGCAACAAATGATATAACTGCCTTTTATAGTTCAGATGTATCATTGAAGGAAAATATTGTAGAAATACCATCTGCCTTAGATATGGTAGATAAAATAAGAGGAGTTTTCTTTGATTGGAAAGATGACTATATAGAAAGTAAAGGCGGCGAAGACGGATACTTTATGAGAAAACATGATGTAGGTTTAATTGCACAAGAAGTTGAGGCAGTTTTACCTGAGATTGTAGGTACTAGAAAAGATGGTATCAAGGCAATCAAGTATGACAGATTGACTGCTTTACTATTGCAAGCGATTAAAGAATTGCAAGCGAAAATTAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
4a04fec8ad9a686d78c5212f408d77f46ac85c312dfb273192fa5c0835db271b
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6170
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50