Protein

View in Explore
Genbank accession
QQO88417.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MKLNITAPGLFFNRSGDRVTVDQIVLENSAGAVVSFPVKGRIWKMYRGAYRPREFKIWTAAGKFYAGEQSRSPWDIVGEVVADDVRPVYWQDLTDDQKAQAAAKYHNGEGTPEDYFTYTPDQFIVINGDVYDLDADAAVYEVEGLKGHVHILESSKADGGALAVQCVEGWDVISVYRVQVTL
Physico‐chemical
properties
protein length:182 AA
molecular weight: 20270,47100 Da
isoelectric point:4,83657
aromaticity:0,12088
hydropathy:-0,23846

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage vB_SenS_ER6
[NCBI] 		2801574 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella typhimurium
[NCBI] 		90371 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QQO88417.1 [NCBI]
Genbank nucleotide accession
MW355470.1 [NCBI]
CDS location
range 20576 -> 21124
strand -
CDS
ATGAAACTGAATATTACCGCGCCGGGCCTGTTCTTTAATCGTAGCGGCGACCGCGTCACAGTGGATCAAATCGTTTTAGAGAATAGCGCCGGGGCCGTCGTGTCATTCCCTGTTAAGGGCCGGATCTGGAAAATGTACCGGGGCGCATACCGTCCGCGCGAGTTTAAGATCTGGACGGCGGCGGGCAAGTTTTACGCGGGCGAACAATCCCGATCGCCGTGGGATATTGTCGGCGAGGTTGTCGCGGACGATGTGCGCCCGGTCTACTGGCAAGATCTGACCGATGACCAGAAAGCGCAAGCCGCCGCCAAATATCACAACGGGGAAGGCACGCCGGAAGATTATTTCACCTATACGCCGGATCAATTCATTGTAATTAATGGTGACGTGTACGATCTGGACGCCGACGCGGCAGTTTATGAGGTGGAAGGGTTAAAAGGTCATGTGCACATACTGGAAAGCTCAAAGGCGGACGGGGGCGCGTTGGCGGTGCAATGCGTCGAAGGTTGGGACGTCATAAGCGTTTACCGTGTACAGGTGACGTTATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
873c6e9f40f5ac2c05dbc043cf6cc8fb63d4bd94281e19fdabcccb4be6e4e21a
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,6833
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and characterisation of bacteriophages with activity against invasive non-typhoidal Salmonella causing bloodstream infection in Malawi Rodwell,E.V., Wenner,N., Pulford,C.V., Cai,Y., Bowers-Barnard,A., Beckett,A., Rigby,J., Picton,D., Blower,T.R., Feasey,N.A., Hinton,J.C.D. and Perez-Sepulveda,B. — — GenBank