Protein

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Genbank accession
QBI78072.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,76
Protein sequence
MADVRPTKLQADGNGYGSLREFSDGDTVPIALGGTGAATAAGARTSLGLGSAAVRAALGSTGALYSRDSILGSVSQSSGVPTGAVIQRGSNANGEFVRFADGTQICIVTLLGDGSQQPGTSISLPLPAAFLGNWTTGVSVSWASHVSNPSVANGLKVAYANGSTLFFILQDALATNRLIFTLVGRWF
Physico‐chemical
properties
protein length:187 AA
molecular weight: 18922,98230 Da
isoelectric point:7,92331
aromaticity:0,07487
hydropathy:0,22727

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage vB_Pae_CF208a
[NCBI] 		2563559 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas aeruginosa
[NCBI] 		287 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QBI78072.1 [NCBI]
Genbank nucleotide accession
MK510978.1 [NCBI]
CDS location
range 19232 -> 19795
strand +
CDS
ATGGCTGATGTACGCCCGACGAAACTCCAGGCCGACGGAAACGGCTATGGCAGCCTCCGCGAGTTCTCCGATGGCGACACGGTGCCGATTGCCCTGGGTGGTACTGGCGCTGCAACCGCTGCTGGCGCTCGCACATCCCTTGGACTTGGGAGTGCTGCAGTTAGAGCTGCCCTGGGTTCAACTGGGGCTTTGTACTCGCGAGACAGCATCCTTGGCTCGGTTTCGCAGTCGAGCGGGGTGCCAACTGGCGCAGTGATCCAGCGGGGTAGTAATGCGAACGGTGAGTTCGTGCGGTTCGCTGATGGAACGCAAATATGCATAGTCACGTTGTTGGGCGACGGTAGTCAGCAGCCAGGTACGTCTATATCACTGCCCCTGCCGGCTGCATTTCTGGGTAATTGGACCACCGGTGTCAGCGTGAGTTGGGCGTCGCATGTGAGCAACCCTTCTGTGGCAAACGGGCTGAAAGTTGCCTATGCAAACGGCTCGACATTGTTCTTCATCCTTCAGGACGCACTGGCCACCAATCGTTTGATTTTCACTTTGGTAGGGAGATGGTTCTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
8cfc4b9b34663b226432ee8f13880a650d7c8915cb75cb2e5c48521871a554ab
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7422
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Mobilizing temperate bacteriophage communities and resolving individual phage genomes from cystic fibrosis and bronchiectasis Pseudomonas aeruginosa isolates Tariq,M.A., Everest,F.L.C., Cowley,L.A., Wright,R., Holt,G.S., Ingram,H., Duignan,L.A.M., Lanyon,C.V., Perry,A., Perry,J.D., Bourke,S., Brockhurst,M.A., Bridge,S.H., Soyza,A.D. and Smith,D.L. 2019 — GenBank