Protein

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Genbank accession
YP_008857255.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 0,51
TF
Evidence RBPdetect
Probability 0,66
TF
Evidence RBPdetect2
Probability 0,92
Protein sequence
MADMTQFEQAVDQVIEDSERLHKVVNGTASETVVTEDGSTIPTVRKALLDNLFFKTPPIPWVAGSQATVFNQLYAFNGTNGVQWWYAPGATATAPVTLPANPSTSVNWRLYNDAAAMASIYAPINSPILTGNPQAPTPAANSNSTTIATTAFVTTAIANALSSISGGSVTFANVTVSGATTLNNLTVNGTTTLNGPVNADNSTGRFQNLILTKQASSLTFVYTDAGNPTFFKTRLDPYAIQTHNLQTDIIVNGTVAADDTTMSLTGVGNNVFDYVYIRGNNAKDISAPRLKVSGMTEVENLHITGSVTGLSFSVNGLDILPNSVTTTAGVTVGSDLVVNGSATLGNTTFSSLEVINTLKVDGSTTLVDFTASSGTITGPFTVGGLSNLNGGFTTGSANGAIGGNLSVTGSTELLSGLNVTGDVAITGNLSATGDVTLNNGSGTTTVNNLVIQGTVTGLTVDLTGQSVSVASLTATGSVTAATLTVQDTADLPNARVGFLTLVAEDVESSTANWTPSGTSNIYTVLVDANLTIGAWPSPPNAFSAMIYLTQDATGGHTVTLDPNYLVLNSETINQTAGSVTILQLTYNGVEDGVIDTVIVRRP
Physico‐chemical
properties
protein length:602 AA
molecular weight: 61911,97060 Da
isoelectric point:4,21941
aromaticity:0,06146
hydropathy:0,12807

Domains

Domains [InterPro]
DC_0194
STR
1–600
DC_0194
IPR058969
ATT
5–111
IPR058969 IPR058970
YP_008857255.1
1 602
Architecture
ATT
STR
ATT 1-111 | STR 112-600 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_008857255.1
1 602
Domain Start End Length (AA) Confidence
N-terminal 1 240 240 0,9097
Central domain 241 486 247 0,3667
C-terminal 487 602 115 0,7894
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-240
Central
241-486
C-terminal
487-602

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage 4MG
[NCBI] 		1391428 Uroviricota > Caudoviricetes > Vequintavirinae > Seunavirus 4MG >
Host Escherichia coli K-12
[NCBI] 		83333 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Escherichia

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_008857255.1 [NCBI]
Genbank nucleotide accession
NC_022968.1 [NCBI]
CDS location
range 23399 -> 25207
strand -
CDS
GTGGCAGATATGACTCAATTTGAACAGGCTGTTGATCAGGTCATCGAAGACTCTGAACGCCTGCACAAAGTTGTCAACGGTACTGCTTCTGAAACTGTTGTTACTGAAGATGGTAGCACCATCCCAACAGTTCGTAAAGCACTTCTGGACAACTTATTTTTCAAGACACCGCCTATTCCCTGGGTAGCCGGGTCTCAAGCGACGGTCTTTAACCAGCTTTACGCATTTAATGGCACCAATGGTGTTCAGTGGTGGTATGCTCCGGGTGCAACGGCAACTGCTCCTGTAACTCTCCCAGCAAACCCATCTACCAGCGTCAACTGGAGACTGTACAATGATGCAGCGGCGATGGCATCCATCTATGCTCCAATCAACAGCCCAATCCTGACAGGTAACCCGCAGGCCCCAACACCTGCTGCAAACAGCAACAGTACGACAATTGCAACAACCGCTTTCGTTACGACTGCGATTGCAAATGCTTTGTCCAGTATCTCTGGTGGTAGTGTTACCTTTGCGAACGTAACTGTTTCTGGTGCAACGACACTGAACAACTTGACTGTGAATGGTACAACCACTCTTAACGGCCCGGTCAACGCAGACAACTCCACCGGACGTTTCCAAAACCTGATTTTGACTAAGCAGGCTTCAAGCCTTACTTTCGTCTATACAGATGCAGGAAACCCAACATTCTTCAAGACCCGTCTTGATCCTTATGCGATCCAGACCCACAACCTGCAAACAGACATTATTGTCAACGGCACAGTTGCTGCTGATGACACAACAATGTCTCTGACAGGTGTTGGTAACAACGTCTTCGATTATGTGTATATCCGTGGTAATAACGCGAAGGATATCTCCGCTCCGCGTCTGAAAGTATCAGGAATGACAGAGGTTGAGAACCTCCATATCACAGGTTCTGTGACTGGTTTGAGCTTCAGTGTTAATGGCCTTGACATTCTGCCTAACTCTGTTACGACTACCGCAGGTGTAACTGTTGGTTCTGACCTGGTTGTTAACGGTTCTGCTACTCTCGGCAACACCACATTTTCAAGTCTTGAGGTGATTAACACCCTGAAGGTAGATGGGTCAACAACCCTTGTTGACTTCACTGCCTCAAGTGGTACAATCACAGGACCTTTCACTGTTGGTGGTCTGAGCAACCTTAACGGCGGTTTCACTACAGGTTCTGCTAATGGCGCAATCGGTGGTAATCTGTCTGTAACTGGTTCAACAGAGCTTCTTTCAGGCCTTAACGTAACTGGCGATGTAGCAATCACTGGTAACCTGTCTGCTACCGGGGATGTGACCCTGAATAACGGGTCTGGAACAACTACGGTTAATAACCTTGTTATCCAAGGGACTGTAACTGGACTGACAGTTGACCTTACCGGACAATCTGTTAGCGTTGCTTCTCTGACAGCTACAGGATCTGTTACGGCTGCTACTCTGACGGTACAAGATACCGCAGACCTTCCTAATGCTCGTGTTGGATTCCTGACTCTTGTTGCGGAAGATGTAGAAAGCTCAACGGCTAACTGGACACCGAGTGGTACATCCAACATCTACACTGTGCTGGTTGATGCTAACCTGACAATCGGTGCATGGCCTTCTCCACCAAACGCATTCTCTGCGATGATTTATCTGACTCAGGATGCCACCGGAGGTCATACTGTCACACTGGACCCTAACTATCTGGTTCTCAACAGCGAGACAATCAATCAGACTGCGGGTTCTGTAACCATCCTTCAGCTAACCTATAATGGCGTTGAAGATGGTGTGATCGACACCGTTATTGTTCGTCGTCCGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
5bf1500ec6831b8d4fae4dc146ef596e8228de643018bfafd5c60d3ece07aa67
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6106
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50