Protein

View in Explore
Genbank accession
XXJ49558.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MYSPRPYGRFAEDAELSADDAAAVERLARNLTNFKQASDLANLKRVADLPSGRQAVAMDMGGVFRILVLEQHELPQFRFDGVAQTNIPMLFSGVITRAQVLTDGQGVGIRLTEQARRRLVAYDPKAALPPKDVALQRFVIKYEPRFQYFEPREQGIYTFTQYVKQRPTWYSGAMAEVMQVAGGYGRQVMAELPEDDLERARMLIPERYMHRIRQEVGNVRLPAYTGFPDEQGQFKCDYLASRCNAVAFDAGNSPWLLQINARGVYAMPLPVVPATTTEAFRDYVLDVGDDELLKLLDRFGGMPTGEGFPQPEQEFEAWRRAGVIVKVCDTADFYNFEAMYAACGWAVNSRGTEGFNTCWTYDDAGLMQVHAYKMSLSLAPAENQGRLKNTWNFDDPDDAAKLNAYLAQVYGALTDGTARELAIKYKIRRVPAGEILSRASSASGPDLDYWDSLELPPIATHQGRVSRVASGPFYWPSKVLKSCTRLKFPELTGQGCESFPHISPDYSGGAVKCDTIVFGCYVEDQLRVIKYFYDERKFQQETTSTFEQYMIVGQWEKTETFGLSGLMGFFYTTDFDDRQEQPAVTVHTNIVGTDMGYGNPAYSTPPTLWCVGGVSRSRYYMHRTTVDTTETFTLDVAALVPVFERDCMLYAYQDHTGGRSSHEETTQGSVPDPTSYELWCYDDIWHWMGQTRNGNRGDPPSKDGVPVYVDTLVYSPTEISDFAESGNWLNLPPGGFLDVTGICGPYTYRNSVHNANGVIIGGEAPGFDPYRKDTQYPNESSGRLSVCLSVAGAVQVNKDMPHSWYWGFSPENDFYFYRDAVHVAIGDARYASIYETGQDGLRRRWGHTALADHKAAHHFIGVINE
Physico‐chemical
properties
protein length:865 AA
molecular weight: 97094,74680 Da
isoelectric point:5,17175
aromaticity:0,12254
hydropathy:-0,40277

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XXJ49558.1
1 865
Domain Start End Length (AA) Confidence
N-terminal 1 136 136 0,9762
Central domain 137 473 338 0,7610
C-terminal 474 865 391 0,4793
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-136
Central
137-473
C-terminal
474-865

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage Atpa001
[NCBI] 		3423286 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas aeruginosa
[NCBI] 		287 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XXJ49558.1 [NCBI]
Genbank nucleotide accession
PV641718 [NCBI]
CDS location
range 13571 -> 16168
strand -
CDS
ATGTATTCGCCGCGCCCCTACGGACGTTTCGCGGAAGACGCGGAGCTTTCCGCCGACGATGCCGCCGCTGTCGAGCGGCTGGCCAGGAACCTGACGAACTTCAAGCAGGCGTCTGACCTCGCCAACCTGAAGCGCGTTGCGGACCTGCCCAGCGGCCGGCAGGCGGTGGCCATGGACATGGGCGGAGTGTTTCGCATCCTGGTGCTCGAGCAGCATGAGCTTCCGCAATTCCGTTTCGACGGGGTGGCACAGACCAACATCCCCATGCTGTTCTCCGGCGTCATCACCCGCGCCCAGGTGCTGACCGATGGGCAGGGCGTTGGCATAAGGTTGACCGAGCAGGCCCGGCGCCGGCTGGTGGCCTACGACCCGAAAGCGGCGCTTCCGCCGAAGGACGTGGCGTTGCAACGCTTCGTCATCAAGTACGAACCTCGTTTCCAATACTTCGAGCCGCGCGAGCAGGGCATCTACACATTCACTCAGTACGTCAAGCAACGCCCGACCTGGTACAGCGGCGCCATGGCCGAGGTCATGCAGGTGGCTGGCGGATATGGGCGGCAGGTCATGGCCGAACTGCCAGAGGACGACCTTGAGCGCGCAAGGATGCTGATTCCTGAGCGCTACATGCACCGCATCCGCCAGGAAGTCGGCAACGTTCGGCTGCCGGCCTACACAGGCTTTCCGGACGAGCAAGGCCAGTTCAAATGTGACTACCTCGCCAGCCGCTGCAACGCCGTCGCTTTCGATGCCGGCAACAGTCCGTGGTTGCTGCAGATCAATGCGCGGGGCGTCTACGCGATGCCGCTTCCTGTGGTGCCGGCCACCACCACCGAGGCTTTCCGTGACTACGTGCTGGATGTTGGTGACGACGAACTGCTGAAGCTTTTGGACCGCTTCGGCGGCATGCCTACTGGTGAGGGGTTCCCACAGCCGGAACAGGAGTTCGAGGCGTGGCGCCGGGCCGGCGTCATCGTCAAGGTCTGCGACACCGCCGACTTCTACAATTTCGAGGCCATGTACGCGGCGTGTGGCTGGGCGGTGAACAGCCGAGGCACCGAGGGCTTCAACACCTGCTGGACCTATGACGACGCCGGCCTGATGCAGGTCCATGCGTACAAGATGAGTCTGTCGCTGGCCCCGGCGGAGAACCAGGGGCGACTGAAGAACACCTGGAATTTCGATGATCCAGACGATGCAGCGAAACTCAACGCCTACCTGGCCCAGGTCTATGGCGCGCTGACCGATGGCACCGCCAGAGAACTGGCCATCAAGTATAAGATTCGGCGGGTGCCGGCTGGTGAGATTCTCTCGCGCGCCTCTTCGGCCAGCGGCCCGGATCTGGACTACTGGGACAGCCTGGAACTACCTCCCATCGCCACCCACCAGGGCCGCGTGTCGCGCGTCGCCAGTGGCCCTTTCTACTGGCCGTCCAAGGTCTTGAAGTCCTGCACCCGCCTGAAGTTCCCCGAACTGACGGGGCAGGGGTGCGAGTCCTTCCCGCACATCTCGCCCGACTATTCCGGCGGCGCAGTGAAGTGCGACACCATAGTCTTCGGCTGCTATGTCGAGGACCAATTGCGTGTCATCAAGTATTTCTACGACGAACGCAAGTTCCAGCAGGAAACGACAAGTACGTTCGAGCAGTACATGATCGTCGGCCAGTGGGAGAAGACCGAGACCTTCGGCCTCAGCGGGCTGATGGGGTTCTTCTACACGACCGACTTCGACGATCGGCAGGAGCAGCCGGCGGTAACGGTCCATACCAACATCGTCGGCACCGATATGGGCTACGGCAACCCGGCTTACTCCACTCCGCCGACGCTTTGGTGCGTCGGCGGCGTGAGCCGGTCCAGGTATTACATGCACCGCACCACGGTAGACACTACCGAGACGTTTACCCTGGACGTGGCGGCGCTGGTGCCGGTGTTCGAGCGCGATTGCATGCTCTACGCCTACCAGGACCATACCGGGGGACGCAGTTCCCACGAGGAAACGACGCAGGGCTCTGTGCCTGATCCCACGTCCTACGAACTCTGGTGCTACGACGACATCTGGCACTGGATGGGGCAGACGCGGAACGGGAACCGGGGCGACCCGCCATCCAAGGATGGGGTGCCTGTCTATGTCGACACGCTGGTCTACAGCCCCACCGAAATCAGCGACTTCGCCGAGAGTGGCAACTGGCTGAACCTGCCACCTGGCGGGTTTCTGGATGTCACGGGCATCTGTGGGCCGTACACCTACCGCAACTCCGTCCACAACGCCAACGGCGTCATCATCGGCGGCGAGGCGCCAGGCTTCGATCCGTACCGGAAGGACACCCAGTACCCCAACGAGAGTAGCGGGCGCCTGAGTGTGTGCCTGTCCGTGGCCGGCGCTGTTCAGGTCAACAAGGACATGCCGCACTCGTGGTACTGGGGCTTCTCGCCCGAGAACGACTTTTACTTCTACCGCGACGCCGTGCATGTCGCCATCGGCGACGCCCGGTACGCCAGCATCTACGAGACGGGCCAGGATGGACTGCGCCGCCGCTGGGGGCATACCGCACTTGCCGATCACAAGGCGGCCCACCACTTCATAGGGGTTATCAATGAGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
e9ac2a973878e667b823fc6f4c52b4a88d4f403f7bdec29efddafd0de8a32bfa
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,9002
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Use of the Naturally Occurring Bacteriophage Grouping Model for the Design of Potent Therapeutic Cocktails Glonti,T., Goossens,M., Cochez,C., Green,S., Gorivale,S., Wagemans,J., Lavigne,R. and Pirnay,J.P. 2024 38786114 GenBank