Protein

View in Explore
Genbank accession
QIG75801.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MLRLTKNLEPLRVAAEKEIDVVAEGVRGLFITPGSGQSTVYTQKEKEAELVSADPNVDQAEIPHIVLEAEMNGITLLDQAAIILTMAYQWRELSSRIEVARLAGKGQVRAAETPAEIAQSCTAAKETLTGVATGFGLAYNGQ
Physico‐chemical
properties
protein length:142 AA
molecular weight: 15225,17070 Da
isoelectric point:4,82531
aromaticity:0,04225
hydropathy:-0,04648

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Rhizobium phage RHph_Y2_17_1
[NCBI] 		2509590 No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QIG75801.1 [NCBI]
Genbank nucleotide accession
MN988548.1 [NCBI]
CDS location
range 49765 -> 50193
strand +
CDS
ATGCTTAGACTGACCAAGAACCTTGAGCCGCTGCGCGTTGCGGCCGAGAAAGAAATCGACGTCGTCGCGGAAGGTGTGCGCGGCCTCTTCATCACGCCTGGCTCCGGACAGTCGACGGTCTACACTCAGAAGGAGAAGGAGGCCGAGCTTGTCAGCGCGGATCCGAATGTCGACCAGGCCGAGATCCCGCATATCGTGCTCGAGGCTGAGATGAACGGCATCACGCTGCTCGATCAGGCCGCAATCATTCTCACCATGGCCTATCAATGGCGCGAGCTCTCCAGCCGCATCGAGGTCGCGCGCCTGGCCGGCAAGGGGCAGGTGAGGGCGGCCGAAACGCCGGCAGAAATTGCGCAAAGCTGCACCGCGGCAAAGGAAACACTGACAGGAGTTGCCACCGGATTCGGTCTTGCCTATAATGGTCAGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
4623514c983b94d64810bc26e2442857ba7b787bb452653ba55170a33bb7152c
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,9310
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Patterns of diversity and host range of bacteriophage communities associated with bean-nodulatin bacteria Vann Cauwenberghe,J., Santamaria,R.I., Bustos,P., Juarez,S. and Gonzalez,V. 1998-01 — GenBank