Protein

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Genbank accession
XRA40385.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,84
TF
Evidence RBPdetect2
Probability 0,74
Protein sequence
MADIKVVRIESLPATTAVTEDDYLVVQQPDLTRRVKIGDVVHIDGTVSHVISFKEGGKLNGPMDFAYFEEEDLYLRWKGEFPHTVPALSSPYADGGITDAAWMVYTDPSLREELESTIGASMIMTAEGQSVQDVMDVTVQTANDAKALAQRVDFGTVHTVGDVIHLVNFVGPAVIEEGRTTNYPSEAAGEKFLNGVVSRRDTTTVDGIFRGATSGAMYTIAVTNGVATTKRIALRDEFKRLEANNPTRTVIRAGDDLNTAGYLQLDATGRWGMWNQQTASWQPLAIEQGGTGARDAAGVRINIGAFYKQRAALEANFNINNLTGNQDGIYYQPMTANATEANGYPAGSGAGHLIVWQNNANGGTGCRQEYYPFSNVDVWYLRTYQANTNQWTAWQPMVRPRNDDTFRSHIGLGKNNSPAFGNLYLAQYSGDVKNASGILHGDKYDADGVLEHGYRIYSEVRNDNKAWLTIHLHKGAKGSETHRYLGFREDGVLDCPKYMQVGDLTGQLTNWGLGEWIRSSGAERGFWGSKKAAKMVVWDGGMDESGNGTLEWGVYNNRKAKWEPLPHAAGGTGVTTLAEAQNLFKVPAAAGVKDFLTLPRTAGMEDGKYYPIIVRTDPYYAPTTGTDITLVTRSSSGGDPMNCSTLQCHYRTGGWTDRGDSFYGVVNFYQNEKALLGMVAPTRGKQEYVAFYAEARAFPVSVYASRNVVEVFTREQDYQVGPVTDNQDGVKFVAPLQSADLNLAVLGDNITNTRPIVDFKGTSGFYTGGGTQWHYIGTAERYAVMSKMNMPKVELWADGIDYLCYGSPRKALFSNAGFQCASDGTEDLTNGTFTSKCGNGAGLKGQAEFRSTPEAGQVIVRDVVGTAHRFYNFNKDGTFSAPGGFVCHTGGDWNNQFGPNNPSKIMAGNVNGPEGSMVVGGLSVAFSGNYAFQMAGRLDQLYTRSIEGGNHRAWNKVIQHRGQGLGVNDLNDYKGDREGFYHQEANAQATPDRNYPCSRAGTLIVYRNYANVPESCVQEYISYLGEKFLRYGTTIGSVFTWGPWQQLGGKGITLKTAGSNLDPEFMIHTGGGTDVTNTSNMPSNTGRMYYWGNGADRKNVLEFQINDNATSASWVWHCGAKTDEAKSRYLAVNGVVECTAVSQSSDRDLKDNIEVIPNALEAIRKMKGYTYTLKENGMPHAGVIAQEVMEALPEAVGSFVKRKEVPGPTQDGIPLMTEERFYNVDYAAVTGLLVQVCREQDDRITSLEEQVKKLTEVVTELQGKLK
Physico‐chemical
properties
protein length:1266 AA
molecular weight: 138629,02910 Da
isoelectric point:5,58627
aromaticity:0,10111
hydropathy:-0,42836

Domains

Domains [InterPro]
DC_1918
ATT
1–443
DC_1918 DC_1330
G3DSA:2.10.10.80
ATT
47–117
G3DSA:2.10.10.80 cd19958 cd19958 IPR030392
IPR040775
RBD
50–103
IPR040775 IPR030392 Coil
XRA40385.1
1 1266
Architecture
ATT
STR
ATT 1-443 | STR 561-1266
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XRA40385.1
1 1266
Domain Start End Length (AA) Confidence
N-terminal 1 236 236 0,9513
Central domain 237 435 200 0,1933
C-terminal 436 1266 830 0,7631
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-236
Central
237-435
C-terminal
436-1266

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage EPFV3-03/2025
[NCBI] 		3413927 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XRA40385.1 [NCBI]
Genbank nucleotide accession
PV435126.1 [NCBI]
CDS location
range 4030 -> 7830
strand +
CDS
ATGGCTGATATTAAAGTTGTCAGAATTGAATCTCTTCCTGCCACTACTGCAGTGACAGAGGATGATTACCTGGTTGTTCAACAACCAGACCTGACCCGTCGTGTAAAAATTGGCGATGTTGTCCATATAGATGGGACTGTTTCTCATGTAATCTCCTTTAAGGAAGGTGGTAAGTTAAACGGCCCAATGGATTTTGCCTACTTCGAAGAGGAAGACCTCTACCTGCGTTGGAAAGGCGAATTTCCACACACTGTTCCTGCACTATCTTCACCATACGCTGATGGTGGGATTACCGATGCTGCATGGATGGTATATACAGACCCTTCCTTGAGAGAGGAGCTGGAGTCTACCATTGGCGCATCTATGATCATGACAGCCGAAGGGCAGTCTGTACAGGATGTAATGGATGTTACTGTTCAGACAGCCAACGATGCCAAAGCACTTGCACAGCGGGTAGATTTTGGTACAGTGCATACTGTAGGTGATGTTATTCACCTTGTCAACTTTGTTGGTCCTGCAGTTATTGAAGAGGGAAGAACTACTAACTACCCTTCTGAAGCAGCTGGTGAAAAATTTCTGAACGGTGTGGTATCTCGTCGTGATACTACAACTGTTGATGGTATTTTCCGTGGCGCTACCTCCGGAGCCATGTATACCATTGCAGTAACCAATGGTGTGGCAACAACAAAAAGAATAGCACTTCGTGATGAATTTAAGCGCCTGGAGGCAAACAACCCAACAAGAACAGTTATCCGTGCCGGGGATGATTTAAACACGGCGGGGTACTTGCAGCTTGATGCAACAGGCCGTTGGGGTATGTGGAACCAGCAAACAGCTTCGTGGCAACCTCTTGCTATAGAGCAAGGCGGTACAGGAGCCAGAGATGCCGCTGGAGTCCGTATCAATATCGGTGCTTTCTATAAGCAACGTGCAGCCCTTGAGGCAAATTTCAATATCAATAACTTGACTGGTAATCAGGACGGCATATACTATCAACCGATGACTGCTAATGCAACTGAGGCAAATGGTTATCCTGCAGGTTCTGGTGCTGGTCACTTGATTGTTTGGCAGAACAATGCTAACGGTGGCACAGGCTGTCGTCAGGAATACTATCCATTCTCTAACGTGGATGTTTGGTATTTGAGAACCTATCAGGCCAACACAAACCAATGGACTGCATGGCAGCCGATGGTCAGACCTCGGAATGATGACACCTTCAGATCTCATATCGGCCTTGGTAAAAACAACTCCCCTGCTTTCGGGAACCTTTACTTAGCTCAATACTCAGGAGATGTTAAAAATGCTTCAGGTATTCTCCATGGAGATAAATATGACGCTGATGGTGTTCTTGAGCACGGTTATAGGATCTACTCAGAAGTAAGAAACGACAATAAGGCTTGGTTAACAATCCACCTTCACAAAGGCGCAAAAGGATCTGAAACTCATAGGTATTTAGGCTTCCGTGAGGATGGGGTATTAGACTGTCCTAAATACATGCAGGTTGGGGATCTTACTGGTCAGCTGACAAACTGGGGACTTGGAGAATGGATTCGTAGTTCAGGGGCAGAAAGAGGGTTCTGGGGTTCCAAGAAAGCTGCTAAGATGGTCGTCTGGGATGGAGGGATGGATGAGTCCGGTAACGGCACTTTGGAATGGGGTGTTTATAACAACCGGAAGGCCAAGTGGGAACCTTTACCTCACGCCGCAGGTGGTACTGGGGTTACAACTTTAGCAGAGGCTCAGAATCTGTTCAAAGTTCCTGCGGCTGCAGGTGTAAAAGATTTCTTAACACTGCCAAGAACCGCAGGGATGGAAGATGGGAAATATTACCCAATCATCGTTAGGACAGATCCGTACTATGCTCCGACCACAGGGACAGATATCACCCTAGTTACCAGATCGTCATCTGGCGGTGACCCTATGAACTGTTCTACACTACAGTGCCACTATAGGACTGGCGGTTGGACAGATAGAGGAGACTCTTTCTACGGGGTAGTAAATTTCTACCAAAATGAAAAAGCACTTCTTGGAATGGTTGCTCCAACAAGGGGTAAACAAGAGTATGTTGCTTTCTATGCAGAGGCGCGCGCTTTCCCTGTCAGCGTATACGCAAGTAGAAATGTTGTCGAAGTGTTTACCAGAGAACAAGATTACCAAGTCGGCCCTGTAACAGATAATCAGGATGGTGTTAAGTTTGTTGCACCTCTCCAGTCAGCTGACTTGAATCTTGCTGTTCTTGGAGATAACATTACTAACACCAGGCCTATTGTTGACTTCAAAGGCACCTCTGGGTTCTACACTGGTGGCGGCACACAGTGGCACTATATAGGCACTGCTGAACGCTATGCTGTGATGAGCAAAATGAATATGCCAAAAGTCGAGCTGTGGGCAGACGGTATTGACTATTTGTGCTACGGCAGTCCTAGAAAGGCATTATTCTCTAACGCTGGATTCCAGTGTGCATCGGACGGAACAGAGGATCTAACTAACGGCACGTTTACCTCTAAATGCGGTAATGGCGCTGGCCTTAAAGGCCAAGCAGAGTTCAGGTCTACTCCAGAAGCTGGTCAAGTTATTGTTCGAGATGTTGTGGGAACAGCTCATAGATTCTACAACTTCAACAAAGATGGTACTTTCTCAGCCCCAGGTGGTTTTGTATGCCATACTGGTGGAGACTGGAACAACCAGTTCGGGCCCAATAACCCGTCAAAAATAATGGCTGGCAACGTCAACGGACCAGAAGGTTCGATGGTTGTTGGTGGACTGTCTGTGGCTTTTTCTGGGAACTATGCTTTCCAAATGGCTGGTCGCCTTGATCAGTTATACACCAGGTCTATCGAGGGTGGTAACCATAGAGCGTGGAACAAGGTCATACAACACAGAGGGCAAGGTCTGGGGGTTAATGACCTTAACGACTATAAAGGGGATAGGGAAGGTTTTTATCATCAGGAGGCCAATGCTCAAGCCACACCTGATAGAAACTACCCATGCTCCCGAGCAGGTACGCTTATAGTGTATAGGAACTACGCCAATGTTCCAGAGAGTTGCGTACAGGAGTATATATCATATCTTGGGGAAAAATTCCTGCGTTATGGAACAACAATAGGTAGTGTTTTCACATGGGGACCTTGGCAGCAGCTTGGTGGTAAGGGAATTACTCTTAAAACCGCAGGCTCCAATCTTGACCCGGAGTTCATGATACATACAGGTGGCGGGACTGATGTTACCAACACTTCCAACATGCCTTCTAATACAGGCAGGATGTACTACTGGGGTAATGGCGCAGACAGGAAGAACGTGCTTGAGTTCCAGATAAACGACAACGCTACATCTGCCAGTTGGGTATGGCATTGTGGTGCTAAGACAGATGAGGCCAAGTCAAGGTACCTTGCTGTCAACGGCGTAGTAGAGTGCACCGCTGTCAGCCAGAGCTCTGACCGTGACCTGAAGGATAACATAGAGGTTATTCCTAACGCGCTGGAAGCTATCCGTAAGATGAAGGGCTATACCTACACTCTAAAAGAGAATGGTATGCCTCACGCGGGGGTAATTGCTCAAGAGGTCATGGAAGCATTACCTGAAGCTGTTGGCTCTTTCGTGAAAAGGAAAGAGGTTCCTGGTCCTACTCAAGATGGTATTCCTCTGATGACCGAGGAAAGATTCTATAATGTTGACTATGCGGCTGTAACAGGATTGCTTGTTCAGGTTTGCAGAGAACAAGATGATAGAATAACCTCCCTTGAGGAACAGGTTAAAAAACTAACAGAGGTTGTTACCGAGTTACAAGGAAAATTGAAGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
8d6fdee340676deb5a9dca72f5abe0aeefb167382e86025d28e1394b6d73133e
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5487
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50