Protein

Genbank accession
AGK87033.1 [GenBank]
Protein name
putative sigma factor [Pseudoalteromonas phage RIO-1]
RBP type
TF
Evidence RBPdetect2
Probability 1,00
Protein sequence
MTAVPESKFPTVITPEVFSSLYETLEKDVLWFCGNKGIPADDRPDVFHDCMEKVWADREMFTRMGNGRSPATFMYLKLRTAVMEYFNYINTGSKSGNLQVKKKINTYLNSYEEMFLGYTDSDQDTSSSLSLQYEQLEPLNVGYAEVFKILDKMPDLLREYVVCKAEVDTGSTNSSRKELTALMLERGLPVRMRNEVSKFPTVDAYESRLRTFLTSKEIRND
Physico‐chemical
properties
protein length:221 AA
molecular weight: 25456,68870 Da
isoelectric point:5,17840
aromaticity:0,10860
hydropathy:-0,46652

Domains

Domains [InterPro]

No domain annotations available.

Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudoalteromonas phage RIO-1
[NCBI] 		1316739 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AGK87033.1 [NCBI]
Genbank nucleotide accession
KC751414.1 [NCBI]
CDS location
range 12547 -> 13212
strand +
CDS
ATGACAGCAGTACCCGAGAGTAAGTTCCCTACCGTAATAACACCTGAGGTATTCAGCTCCTTGTACGAGACACTGGAGAAGGATGTCCTATGGTTCTGTGGTAACAAGGGTATACCTGCTGATGATAGACCCGATGTCTTTCATGACTGCATGGAGAAAGTATGGGCAGACCGTGAGATGTTCACCCGTATGGGTAACGGTCGTTCTCCTGCTACCTTTATGTACCTTAAGTTACGTACAGCAGTAATGGAATACTTTAACTACATCAACACAGGCTCTAAGTCAGGTAACTTACAAGTAAAGAAGAAGATTAATACGTACCTTAACTCTTACGAAGAGATGTTCTTAGGTTATACTGACTCAGACCAAGACACTAGCAGCTCGCTTAGCCTACAGTACGAGCAGCTTGAGCCTCTGAACGTAGGTTACGCTGAGGTCTTTAAGATACTTGATAAGATGCCTGACCTACTACGAGAGTACGTAGTCTGCAAGGCTGAGGTAGATACAGGCAGTACTAACAGCTCACGTAAGGAACTAACAGCTCTTATGCTAGAGCGTGGACTACCAGTACGAATGCGTAACGAAGTATCTAAGTTCCCTACAGTAGATGCTTATGAGTCAAGGCTTCGTACGTTCTTAACATCTAAGGAGATACGTAATGATTGA

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

No tertiary structures available.

Literature

No literature entries available.