Protein

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Genbank accession
WDS61028.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,86
TSP
Evidence RBPdetect2
Probability 0,77
Protein sequence
MSLTRLKNIITSRTGRIIYVNPDDFDASDAIDNRGNSALRPFKSIQRAFLEVARFSYRVGLSNDEFDAFSIMLYPAEYVIDNRPGKVLYTDVPPIDANSNLDLTSPNNVLHYYNSVEGGVIVPRGCSLVGTDLRRTKIIPKYVPYPTTYTAKGINTEDDVPPRTAIFKVTGGTYFWQFSFFDGAEEGVYFKPDSTETLSPKFSHHRLTCFEFADGLNTLSTLIANNTVPNADYSAVPNILERTDLDIYYQKVSKAFATIPDTSGDPTTDQIQARVEENRIVGPISDEYRVLQITRNGQTATAVTVDEFDNPRDHGFSVGVNINVSGVTGSTGPQSEVDATVFNGSFTVTSTPTGSTFTYQLASVPSGNAVGSNITVKTEIDTVDSASPYAFNLSLRSVWGMNGMHADGSKATGFKSMVVAQFTGLSLQKDDRAFVRYNASTGNYDVATAGDGAHLDGFAEYRKGWGHEHIKCSNDSFIQAVSVFAVGYAGHFTALSGGDMSITNSNSNFGNTALRSAGFKAKAFSKDKAAEITHIIPPKALNVISTTATGASGSSNITLANDGSINGVIEGMTVSGTNIASGATVVSFNVNTRVVTLSGTNTAAVDTNIIFGEETSVNWVNVDIQRTKVINSALSGQGGVAGSRLYLYGYTTEASPPTTKVQGFAIGARQDGTGNDAVPDKLNVLLVANGASSATVQTAKISPYGPDVSNKAAGVTGSPLQYDSATYTINGQAGSVGGWYLSVDPNDNEIYTSLSTNAQYNTVNFTPTTFIKRIPDPRNLQDRTYRVRLKIDKDKTNPLPRDPISGYVMQPLNSDTTSYNLNRTFYIYDIEVVQEFERGVTDGIYYLTLLCASIAPSTSNFNDRKFSQNVNEVYPTFDRDNPVADPNAAVSVADNETIGLVKATDGATPTPNNDPKLSITKEAITFLLTDSGWTQPGTTPNYDSVNERLSNVQLTARAGNEETRKINIRENNDGTVAPINVEFRRHSILRSGNHTFEYLGFGPGNYSTAFPQTQVETLSADQVKFSQSIKEEGGVSFYSGLNSNGDLFIGNQVINPVTGQITNEDIAQLNVVGEENTTIQTFSELVLTDKLTVIGGASNQLESIFAGPVTFQAQTSFTNNLTAKKITYNNQDGTVIKQTLLAPADANGQPSFATITGYDTPGNGDLVYNINWTPGESLGWIYYNGTWHEFGLTDTGDINIDTFNSEQHIGIGTAAVSGFRVGIDGNAKVDGDLVVTGRGGVGADKYITKSYTGDGTTLTFAVSTYSGGIQHSDDSLLVFLNGVAQIAGTNYTVDSNGANVVFSSGDAPQSTDTVHILELPI
Physico‐chemical
properties
protein length:1321 AA
molecular weight: 141845,85130 Da
isoelectric point:4,80315
aromaticity:0,09235
hydropathy:-0,27426

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WDS61028.1
1 1321
Domain Start End Length (AA) Confidence
N-terminal 1 82 82 0,9631
Central domain 83 309 228 0,9574
C-terminal 310 1321 1011 0,1915
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-82
Central
83-309
C-terminal
310-1321

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage S-BM1
[NCBI] 		3021412 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Synechococcus sp. WH 7803
[NCBI] 		32051 Bacteria > Cyanobacteria > Oscillatoriophycideae > Chroococcales > Synechococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WDS61028.1 [NCBI]
Genbank nucleotide accession
OQ319120.1 [NCBI]
CDS location
range 130261 -> 134226
strand +
CDS
ATGTCTCTAACTAGACTTAAGAATATTATTACGTCCCGCACGGGACGTATTATTTACGTTAACCCTGACGACTTTGATGCTTCTGATGCTATTGACAACAGGGGCAACTCAGCGTTGCGTCCGTTTAAGTCTATTCAGAGAGCATTTCTTGAGGTTGCTAGATTTTCGTATCGCGTTGGTCTGAGTAATGACGAATTCGATGCGTTCAGTATCATGCTCTACCCTGCAGAGTATGTGATCGATAACCGTCCTGGTAAGGTTCTTTACACTGATGTTCCTCCCATTGATGCTAACTCAAACCTGGACCTGACTTCACCTAATAATGTTCTGCATTATTACAACTCAGTAGAAGGAGGAGTCATTGTTCCCAGAGGTTGTTCGCTGGTTGGCACCGACTTACGCCGTACCAAGATTATTCCTAAGTACGTACCTTATCCTACAACGTATACTGCAAAGGGAATCAACACAGAGGATGATGTTCCTCCCCGCACCGCAATCTTCAAGGTCACAGGTGGTACATACTTCTGGCAGTTCTCCTTCTTCGATGGTGCTGAGGAAGGTGTATACTTCAAACCTGATAGCACCGAGACTCTTTCTCCCAAGTTCTCGCACCACAGACTGACTTGCTTTGAGTTTGCTGATGGTCTGAACACTCTATCTACACTTATTGCGAATAATACTGTTCCTAACGCAGATTACTCTGCTGTTCCTAATATTCTGGAGAGAACTGACTTAGATATTTACTACCAGAAAGTATCGAAGGCATTTGCAACTATTCCCGATACATCTGGTGATCCTACTACTGACCAGATTCAGGCAAGGGTTGAAGAAAACAGAATCGTTGGTCCTATTTCCGATGAATACCGAGTCCTTCAGATCACAAGAAATGGTCAGACAGCAACGGCAGTTACTGTTGATGAGTTTGATAACCCCCGAGACCATGGATTTAGTGTTGGCGTCAACATTAACGTTTCAGGTGTTACTGGATCAACTGGACCGCAATCCGAAGTTGATGCAACAGTTTTTAACGGATCTTTCACCGTCACTTCGACGCCTACTGGTAGCACATTTACTTACCAGTTAGCATCTGTACCATCAGGTAATGCTGTTGGTTCTAACATTACTGTTAAGACAGAGATTGATACTGTTGACTCTGCATCTCCCTATGCATTCAACCTGTCACTGAGAAGTGTCTGGGGCATGAATGGTATGCACGCAGATGGTAGCAAGGCAACTGGTTTCAAATCGATGGTTGTTGCACAGTTTACGGGTCTATCTCTGCAGAAAGATGATAGAGCGTTCGTAAGATATAACGCTTCTACTGGTAACTATGACGTAGCAACTGCTGGTGACGGTGCTCACCTGGATGGTTTTGCTGAGTATCGTAAAGGATGGGGACATGAGCACATTAAGTGTTCTAATGACTCCTTTATTCAGGCAGTTTCGGTGTTCGCTGTTGGATATGCAGGTCACTTTACTGCATTGAGTGGTGGTGACATGTCGATTACTAACTCTAACTCAAACTTCGGTAATACTGCTCTGAGATCTGCTGGATTCAAGGCAAAAGCATTCTCTAAAGATAAGGCAGCAGAGATTACTCATATCATTCCTCCTAAGGCACTGAATGTCATTTCTACCACTGCAACTGGTGCAAGTGGTTCATCTAATATTACTCTTGCCAACGACGGTAGCATCAATGGTGTTATCGAAGGCATGACAGTTTCTGGCACCAATATTGCTTCTGGTGCTACTGTTGTTTCGTTTAACGTTAATACCAGAGTCGTTACACTCTCTGGAACTAATACAGCAGCAGTTGACACCAATATTATTTTTGGTGAAGAAACATCTGTCAACTGGGTCAACGTTGACATTCAACGCACAAAGGTAATCAACTCTGCACTTTCTGGTCAGGGTGGTGTTGCTGGTTCTAGACTTTACCTATATGGATACACTACTGAAGCATCTCCTCCGACAACAAAAGTACAAGGTTTCGCCATTGGTGCGCGTCAAGATGGCACAGGTAATGATGCTGTACCAGACAAACTGAACGTACTTCTGGTTGCTAATGGTGCATCATCAGCAACAGTTCAGACTGCTAAGATTTCACCTTATGGTCCTGATGTTTCTAACAAAGCAGCAGGCGTTACTGGTTCACCTCTGCAATATGATAGTGCAACATACACTATCAACGGTCAAGCAGGTTCTGTTGGTGGATGGTATCTGAGTGTAGATCCTAATGATAATGAAATCTACACATCATTGTCTACTAATGCACAGTACAACACCGTAAACTTTACCCCTACAACGTTCATTAAGAGGATTCCTGACCCTCGTAACCTTCAAGATAGAACCTATCGTGTTCGCTTGAAGATCGACAAGGATAAGACTAATCCCCTGCCTCGTGATCCTATCAGCGGTTATGTAATGCAACCTCTGAATAGTGACACAACCAGTTACAACCTGAACAGAACATTCTATATCTACGATATTGAAGTAGTTCAGGAATTCGAGAGAGGCGTTACCGATGGAATATACTACCTTACCCTCCTTTGTGCATCTATTGCACCTTCGACTTCTAATTTCAACGACAGAAAGTTCAGTCAAAATGTCAACGAAGTCTATCCTACGTTTGACAGAGACAACCCTGTTGCTGACCCTAATGCTGCGGTATCCGTCGCTGACAACGAAACTATCGGTCTCGTAAAAGCAACTGACGGTGCTACACCTACACCTAATAACGATCCTAAACTGTCTATCACTAAGGAAGCGATTACGTTCCTGTTAACTGATTCTGGTTGGACACAACCAGGTACAACACCTAACTATGATTCTGTTAATGAGAGACTTTCTAATGTTCAACTGACTGCACGTGCTGGTAATGAAGAAACGAGAAAGATCAATATCCGCGAAAACAATGATGGGACTGTCGCACCTATCAATGTTGAGTTTAGGAGACACTCAATCCTTAGATCTGGTAACCATACATTTGAATATCTTGGTTTCGGTCCTGGTAACTATTCAACTGCGTTCCCCCAGACTCAGGTAGAAACTCTGAGTGCAGATCAGGTTAAGTTCTCACAGTCAATCAAAGAAGAAGGTGGAGTTTCTTTCTACTCTGGTTTGAACTCTAACGGTGACCTGTTTATTGGTAACCAGGTTATCAACCCTGTTACTGGTCAGATTACGAATGAAGATATTGCACAGTTGAATGTTGTTGGTGAAGAGAACACTACGATTCAGACATTCTCTGAGTTGGTTCTTACCGACAAACTCACTGTTATTGGTGGTGCATCTAACCAGTTGGAATCTATCTTTGCTGGTCCTGTTACTTTCCAAGCACAAACATCGTTCACAAATAATCTTACTGCCAAGAAGATTACTTACAACAACCAGGACGGCACGGTAATCAAGCAAACATTACTCGCACCCGCCGATGCCAATGGACAACCAAGTTTTGCTACTATCACAGGATACGATACACCTGGTAATGGTGATCTTGTTTACAATATCAATTGGACACCTGGCGAGTCGCTTGGTTGGATTTATTACAATGGAACGTGGCACGAGTTTGGTCTCACAGATACTGGTGACATTAATATCGACACTTTCAATAGCGAGCAACATATCGGTATTGGTACTGCTGCTGTATCTGGTTTCCGTGTTGGGATCGACGGCAACGCCAAAGTAGATGGTGACCTCGTTGTTACTGGACGAGGTGGTGTTGGTGCTGATAAGTATATCACTAAGTCTTACACTGGTGATGGAACAACCCTGACATTCGCTGTTTCTACTTACAGTGGTGGCATCCAGCATAGTGATGATTCACTGCTGGTATTCTTGAACGGTGTTGCACAGATTGCAGGTACAAACTATACAGTTGACTCTAACGGTGCAAACGTTGTATTCAGTTCTGGTGATGCACCACAATCTACAGATACAGTCCACATTTTAGAACTGCCTATCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
d110123955a69081cbf290658f88d88f5b35569282e6448ef7a29bd0c9e79dcd
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,3669
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50