Protein

View in Explore
Genbank accession
AGN12294.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence RBPdetect
Probability 0,86
Protein sequence
MANITSSFTHLLPTELYVAGISTNITGSYTYVGPDAFDVWVDRSDGEVTKIAVTTDPPEGGDIRKTISATSPDSLPMAYALSHQFTDDYSWPYTYTNETMENGDIYKKIDNPDLRDAYQVYWDFASEKWAFKQILKLLVNDNADEAKRRRDYVKTFTDQYDFGDTINTKADHYIAGIGTYLGNNPYYKRWKYITLPASVGTIPKIPVDVQIELNKVSIQGVGGVV
Physico‐chemical
properties
protein length:225 AA
molecular weight: 25345,95990 Da
isoelectric point:4,76887
aromaticity:0,12889
hydropathy:-0,42756

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Prochlorococcus phage P-SSM5
[NCBI] 		536454 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AGN12294.1 [NCBI]
Genbank nucleotide accession
HQ632825 [NCBI]
CDS location
range 105319 -> 105996
strand -
CDS
ATGGCAAACATTACATCATCTTTTACTCACCTTCTTCCTACTGAATTGTATGTCGCTGGCATCTCTACAAATATAACAGGAAGTTATACTTATGTTGGACCTGATGCGTTTGATGTATGGGTTGACAGGTCAGATGGAGAAGTAACTAAAATTGCCGTTACTACTGATCCTCCTGAAGGTGGTGATATTAGAAAAACTATTTCGGCAACGAGTCCTGATTCATTGCCGATGGCATATGCGTTATCACATCAATTCACCGATGATTATAGTTGGCCTTACACCTATACTAATGAAACTATGGAGAATGGTGATATCTATAAGAAGATAGATAACCCAGATTTAAGAGATGCATACCAAGTTTATTGGGATTTTGCTTCAGAAAAATGGGCATTCAAGCAGATATTAAAACTATTAGTGAATGATAATGCTGATGAAGCAAAGAGAAGAAGGGATTATGTAAAAACTTTTACAGATCAATATGATTTTGGTGATACTATTAACACTAAAGCAGATCATTATATTGCTGGTATTGGAACATATCTAGGAAATAATCCATACTATAAGAGGTGGAAGTACATAACACTTCCAGCATCAGTAGGAACTATACCAAAAATTCCTGTTGATGTTCAAATTGAATTAAATAAAGTCTCTATTCAAGGGGTTGGGGGTGTTGTCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
36987d0ccff080e52d435db58514bb426e9384a2f4d29238231544a9a63285dd
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,2993
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The Genome Sequence of Prochlorococcus phage P-SSM5 Henn,M.R., Sullivan,M.S., Osburne,M.S., Levin,J., Malboeuf,C., Casali,M., Russ,C., Lennon,N., Chapman,S.B., Erlich,R., Young,S.K., Yandava,C., Zeng,Q., Alvarado,L., Anderson,S., Berlin,A., Chen,Z., Freedman,E., Gellesch,M., Goldberg,J., Green,L., Griggs,A., Gujja,S., Heilman,E.R., Heiman,D., Hollinger,A., Howarth,C., Larson,L., Mehta,T., Pearson,M., Roberts,A., Ryan,E., Saif,S., Shea,T., Shenoy,N., Sisk,P., Stolte,C., Sykes,S., White,J., Yu,Q., Coleman,M.L., Huang,K.H., Weigele,P.R., DeFrancesco,A.S., Kern,S.E., Thompson,L.R., Fu,R., Hombeck,B., Chisholm,S.W., Haas,B., Nusbaum,C. and Birren,B. 2011-09-23 — GenBank