Protein

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Genbank accession
QOI69851.1 [GenBank]
Protein name
tail tubular protein B
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,73
Protein sequence
MGKVTFTKRSFASGELSSRIHQSRNDLQIHSQGFAYSLNLVPLQSGALVHRPRTISYPNLSLPLGSRRLIPFYSTGDTHVLLVFGHKTLSFVKIEGGEHPNIAQDDITTPYSGSVAETLSYAISGNLMILAHPNHPPYQLEVTDKGFNFRIMKFSPPPWLGNGVVGGDSVDAKLRIIIPKNNKDEEGEYGVEAIGGDVFKASDKGRFLRLGFTPKAWRAETKYSEKSFIYMYGKIYQSTQGGTSGAKWFDNTKDAFISDGSINWKVVASAQSITSPRYGKQTTTTTAEPIPSYYVWGCITNVKNSKKVVIKLNPSFILHDEEPTRLWNLSAWGSKEGYPKTVTFYQNRLVFSGTESDASSLYLSEYRKYNYFSPDGEYGSPDYLKALSVAVTDDVLREIRWMTPMEHGLLVGCDSSLWLLCIDLDNGFNIVTRRISGSGVASCPALSVGDSILFVCGAGRKIKAVSGGIEQGFKFKDVTQFVDHLFTFQVKQMIYQEDPYSLIWIIDKSTPGAYKSYNLLGCRFTSEEETEFAWHAHKIGGDMAILSLATFPSIDRGETDFWMLAMRRTNDSYKVVLERLDCFHLSHNYLADGTDA
Physico‐chemical
properties
protein length:596 AA
molecular weight: 66533,58330 Da
isoelectric point:7,23421
aromaticity:0,11913
hydropathy:-0,26527

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QOI69851.1
1 596
Domain Start End Length (AA) Confidence
N-terminal 1 176 176 0,9942
Central domain 177 375 200 0,0757
C-terminal 376 596 220 0,0516
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-176
Central
177-375
C-terminal
376-596

Taxonomy

  Name Taxonomy ID Lineage
Phage Liberibacter phage P-PA19-1
[NCBI] 		2768128 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Candidatus Liberibacter asiaticus
[NCBI] 		34021 Bacteria > Proteobacteria > Alphaproteobacteria > Rhizobiales > Rhizobiaceae > Candidatus Liberibacter

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QOI69851.1 [NCBI]
Genbank nucleotide accession
MT899444 [NCBI]
CDS location
range 12542 -> 14332
strand -
CDS
ATGGGTAAGGTAACTTTTACAAAGCGTTCTTTTGCTTCTGGGGAATTGTCGTCCAGAATTCATCAATCTCGTAATGATCTTCAGATTCATTCGCAAGGGTTCGCCTATTCTCTTAACCTTGTTCCTTTGCAGTCAGGGGCATTAGTTCATCGACCTCGCACTATATCCTATCCAAATTTGAGTTTGCCTTTAGGATCTAGGCGTTTGATTCCGTTTTATTCAACGGGTGATACTCATGTTTTACTTGTTTTTGGGCATAAGACCCTTTCCTTTGTAAAGATTGAAGGTGGGGAACATCCTAATATAGCCCAAGATGATATCACTACTCCTTATAGCGGTTCCGTAGCAGAGACGTTATCTTACGCTATTTCTGGTAATTTAATGATTTTGGCTCATCCCAATCATCCGCCATATCAACTAGAAGTAACGGATAAAGGTTTTAATTTCCGCATAATGAAATTTTCCCCTCCCCCATGGTTAGGTAATGGAGTCGTCGGCGGTGATTCGGTCGATGCGAAGTTAAGAATTATAATCCCTAAAAATAATAAGGATGAGGAAGGTGAGTATGGGGTTGAGGCGATTGGTGGCGATGTTTTTAAAGCCTCAGACAAAGGTAGATTTCTTCGGCTAGGTTTTACCCCTAAGGCTTGGAGGGCTGAAACCAAGTATTCGGAAAAATCTTTTATTTATATGTATGGAAAAATATATCAAAGTACACAAGGGGGTACGTCTGGAGCTAAATGGTTTGATAACACCAAGGATGCTTTTATTAGCGATGGTAGTATTAATTGGAAAGTAGTTGCAAGCGCTCAAAGTATTACCTCTCCCCGATACGGAAAGCAAACAACGACAACAACAGCAGAACCTATACCTTCGTATTATGTGTGGGGGTGTATTACAAATGTCAAGAATAGTAAAAAGGTTGTTATAAAACTTAACCCTTCGTTTATCTTGCATGACGAAGAACCTACACGTTTATGGAATTTGAGTGCTTGGGGTAGCAAGGAAGGTTACCCCAAAACTGTTACTTTTTATCAAAATAGATTAGTATTTTCTGGTACTGAATCTGACGCATCATCACTTTATTTATCTGAATACCGAAAATATAACTACTTTTCTCCGGACGGGGAGTACGGATCACCTGATTATTTAAAAGCGCTATCTGTAGCGGTGACCGATGATGTGCTGAGAGAAATTAGATGGATGACTCCAATGGAGCATGGTTTGCTTGTAGGCTGTGATTCCTCCTTGTGGCTACTTTGTATTGATCTGGATAATGGGTTTAACATAGTCACCCGTCGTATTTCGGGTTCGGGGGTTGCTTCTTGTCCTGCTTTGTCTGTTGGAGATTCTATTCTTTTTGTTTGCGGTGCAGGTCGTAAAATCAAGGCTGTATCTGGTGGTATTGAGCAGGGATTTAAGTTTAAGGATGTTACTCAATTCGTTGACCATCTTTTTACGTTTCAAGTAAAACAGATGATTTATCAAGAAGACCCTTATTCTTTAATCTGGATTATCGACAAATCAACCCCGGGAGCTTACAAATCTTATAATCTTTTGGGATGTCGTTTTACCTCTGAAGAGGAAACTGAGTTTGCTTGGCATGCTCATAAAATAGGAGGGGATATGGCTATTCTGTCGTTAGCGACATTTCCTAGTATAGACCGAGGTGAAACCGATTTTTGGATGCTTGCCATGCGAAGAACTAACGATAGCTATAAGGTGGTATTAGAGAGATTAGATTGTTTCCATCTTTCACATAACTACTTAGCGGATGGCACAGATGCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
b681227ba36b69aa1e8ba2bbf6e47a255fdb5cee6fca05f5b50c7305c64aa5e3
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8252
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Two unique prophages of 'Candidatus Liberibacter asiaticus' strains from Pakistan Cui,X., Liu,K., Atta,S., Zeng,C., Zhou,C.Y. and Wang,X. 2020 33356428 GenBank