Protein

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Genbank accession
AOO07395.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,83
Protein sequence
MGKLNVGNLEGNFPNYRVTLHHDSELGIGSQLIIQNQQYMPLPSNTQNYHDNATYGARGAVRGAVRWNTTTEDIEVYNGSVWIPKTPPAAGIGTESNPARSGVEIFNAGLASGNYWIQPDNQVAYEMYVDNDRNGGGWTLCVVARTSTCQDHMNNSAVRITTTSGPRTSNTSTTKMADSWIQALRNSSTYTGSTAYWMEALNFNKSVFISSAATVNLLDSASNDNERTRISTTYQGTLDNRNPNTGTRGFGDHHTSGSTYFAYGRHPEEGNNCGFREDTNGSSDGYLWVK
Physico‐chemical
properties
protein length:290 AA
molecular weight: 31783,20890 Da
isoelectric point:5,78527
aromaticity:0,09655
hydropathy:-0,68931

Domains

Domains [InterPro]
DC_0522
ATT
1–124
DC_0522 DC_0434
IPR036056
STR
94–140
IPR036056
NF040941
Unmapped
108–140
NF040941
AOO07395.1
1 290
Architecture
ATT
STR
STR
ATT 1-124 | STR 125-140 | STR 145-290
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AOO07395.1
1 290
Domain Start End Length (AA) Confidence
N-terminal 1 191 191 0,0133
Central domain 192 279 89 0,1278
C-terminal 280 290 10 0,9773
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-191
Central
192-279
C-terminal
280-290

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage S-RIM2
[NCBI] 		687800 Uroviricota > Caudoviricetes > Pantevenvirales > Nerrivikvirus > Nerrivikvirus srim2
Host Synechococcus
[NCBI] 		1129 cellular organisms > Bacteria > Bacillati > Cyanobacteriota/Melainabacteria group > Cyanobacteriota > Cyanophyceae

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AOO07395.1 [NCBI]
Genbank nucleotide accession
KX349272 [NCBI]
CDS location
range 27001 -> 27873
strand +
CDS
ATGGGAAAGTTAAACGTCGGTAACTTAGAGGGTAACTTTCCTAACTACCGAGTTACTCTTCACCATGACAGTGAGTTGGGTATTGGAAGTCAACTGATTATTCAGAATCAGCAGTACATGCCTCTGCCTTCTAATACTCAAAATTATCATGACAATGCAACTTACGGTGCTAGAGGTGCAGTAAGAGGTGCAGTAAGGTGGAATACTACCACCGAAGATATTGAAGTATATAATGGTAGTGTATGGATTCCTAAGACACCTCCTGCTGCAGGGATTGGCACTGAGAGTAATCCTGCTAGAAGTGGTGTAGAGATCTTTAATGCTGGTTTAGCATCTGGTAACTATTGGATTCAACCTGATAATCAGGTAGCATACGAAATGTATGTTGATAATGATAGAAATGGTGGTGGATGGACATTGTGTGTTGTTGCTAGAACATCAACATGTCAAGATCACATGAACAATAGTGCTGTTCGTATTACTACAACTTCTGGACCCAGAACTTCTAACACTTCTACTACCAAGATGGCAGACTCTTGGATTCAAGCACTGCGTAACTCCTCTACATATACTGGAAGCACCGCATATTGGATGGAAGCACTTAACTTTAACAAGAGTGTCTTTATCTCTAGTGCTGCAACTGTCAACTTGCTTGATAGTGCATCAAATGATAATGAGAGAACTAGAATCTCGACTACCTATCAAGGTACTTTAGACAATAGAAATCCTAACACTGGAACCAGAGGTTTCGGTGACCACCATACATCAGGCAGCACATACTTCGCGTATGGTAGACACCCTGAAGAAGGTAATAACTGCGGATTTAGAGAAGATACAAACGGTTCTTCTGATGGTTACTTATGGGTTAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
a2013a3818f34636b110953f9890c5b705fc0d881c54d8e33a68571b7e207781
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6234
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50