Protein

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Genbank accession
QGT53135.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,85
Protein sequence
MTFSVNYNGVELSELVSGFTAIDRGFGSVWNNTLSNQVARYGQSFVKNSLSAKTITITIRKSGIPSDWIALRKELAKVLDVNEPAPLIFGDEPNKVWYAVADGTQALSEDISNLVATGTLTFIVPEGHAYSTYTNVLNSDNSGGVNGSITPNADGSVDITINNQGTLPTWIDLKLTNNHDNGYFGIAGVNGSLELGNREEVDGVTIKHSDILYDSKTDPKFSKFVSAAGQPHPEWTGAGTNGTIGYQEYNYKSSNGQQKTMKGVKLINPGSQTGFRGGMAELVLPPDSNGDSGAVNFYAWFRLFTWTTVLGQTGVMQILFTDENDEFVAGYGTLKDDKTGNIGTVGFWIGGPNKGQWKHIPYVANNGEQTGLKDNNTMLNDNRGALDFFKQGSTLGFYWKGGHQRIVVPELKDVAIHKVKFFFGNWSTNPRGTMTHMVIRDFWCRKDFVNTWNDLPNRYKNGSVVEIDMASGNVSKDGISAITEVVNGTEPFNIPPGISQIKIIQSSWNNTPPDVEISWKERIL
Physico‐chemical
properties
protein length:524 AA
molecular weight: 57404,40150 Da
isoelectric point:5,48476
aromaticity:0,10496
hydropathy:-0,36546

Domains

Domains [InterPro]
G3DSA:2.40.30.200
ATT
1–130
G3DSA:2.40.30.200
DC_0420
STR
1–524
DC_0420
IPR006520
Unmapped
5–130
IPR006520
IPR008841
STR
34–124
IPR008841
QGT53135.1
1 524
Architecture
ATT
STR
ATT 1-130 | STR 131-524
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QGT53135.1
1 524
Domain Start End Length (AA) Confidence
N-terminal 1 271 271 0,7434
Central domain 272 470 200 0,0489
C-terminal 471 524 53 0,0890
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-271
Central
272-470
C-terminal
471-524

Taxonomy

  Name Taxonomy ID Lineage
Phage Lactococcus phage CHPC836
[NCBI] 		2675253 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Lactococcus lactis
[NCBI] 		1358 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Lactobacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QGT53135.1 [NCBI]
Genbank nucleotide accession
MN689521 [NCBI]
CDS location
range 15488 -> 17062
strand +
CDS
ATGACATTTTCAGTTAATTACAATGGTGTTGAACTATCTGAATTAGTAAGTGGATTCACAGCAATTGATAGAGGGTTTGGTTCAGTATGGAATAATACATTATCAAATCAAGTAGCCAGATACGGTCAATCATTTGTGAAGAATTCATTAAGTGCAAAAACAATTACTATTACCATTAGAAAAAGTGGAATTCCAAGTGATTGGATAGCCTTAAGAAAAGAATTAGCAAAGGTGCTGGATGTCAATGAACCAGCGCCTTTAATTTTTGGTGATGAGCCTAATAAAGTTTGGTATGCAGTAGCAGATGGAACTCAAGCCTTATCAGAAGATATCTCTAACTTAGTTGCTACTGGAACTCTTACATTTATAGTCCCAGAAGGGCACGCTTATTCGACATATACTAATGTTTTAAACTCAGATAATTCAGGTGGAGTCAATGGTTCTATCACTCCTAATGCTGATGGTTCGGTTGATATCACAATTAATAATCAAGGAACATTACCGACTTGGATTGATTTAAAGCTTACCAATAATCATGACAATGGGTATTTTGGTATTGCTGGGGTTAACGGAAGCTTAGAATTAGGTAATCGAGAAGAAGTTGATGGTGTTACTATCAAGCATAGCGATATTCTTTATGATAGTAAAACTGATCCTAAATTTTCTAAATTTGTATCAGCCGCAGGTCAACCCCATCCAGAATGGACTGGTGCAGGAACAAATGGAACAATTGGGTATCAAGAATATAATTATAAGTCTTCCAATGGGCAACAGAAAACAATGAAGGGTGTTAAGTTGATTAATCCTGGAAGTCAGACAGGTTTTCGTGGAGGCATGGCAGAGCTTGTCTTACCACCAGATTCAAATGGTGATTCTGGTGCAGTTAATTTCTATGCTTGGTTCAGATTATTTACTTGGACAACTGTTCTTGGCCAAACTGGAGTCATGCAAATTCTATTCACTGATGAAAATGATGAGTTTGTGGCTGGTTATGGGACTCTAAAGGATGATAAAACAGGAAATATTGGGACTGTTGGATTTTGGATTGGCGGACCTAACAAAGGGCAATGGAAACATATTCCTTATGTCGCAAATAATGGAGAACAAACTGGGTTAAAAGATAATAATACGATGCTTAATGATAATCGAGGGGCATTGGATTTCTTTAAACAAGGTTCAACTCTTGGTTTTTATTGGAAAGGCGGACATCAGCGCATCGTCGTCCCAGAACTTAAAGATGTCGCAATTCATAAGGTTAAGTTCTTCTTTGGGAACTGGTCAACTAACCCAAGAGGAACGATGACACATATGGTTATTCGTGACTTTTGGTGCCGCAAAGACTTTGTTAATACATGGAATGACTTACCAAATCGCTATAAAAATGGCTCAGTCGTTGAAATTGATATGGCTAGTGGTAATGTATCCAAAGATGGAATATCAGCCATTACAGAGGTAGTAAATGGAACAGAACCTTTCAATATTCCACCTGGAATTAGTCAGATCAAAATCATTCAATCATCTTGGAATAATACACCACCAGACGTTGAAATATCATGGAAAGAAAGGATTTTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
bf32dc16f926307f4b6dbb4be3a5629c4ff864cb43f6f7dec4f761a38923e5a4
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8467
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genome Sequences of 31 Lactococcus lactis Bacteriophages Isolated from Foods Marcelli,B., de Jong,A. and Kuipers,O.P. — — GenBank