Protein

View in Explore
Genbank accession
YP_007392703.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence RBPdetect
Probability 0,76
Protein sequence
MSSNTDIIALLSSDADKAVDQIIEDSKRLHIVVNGTGTEQAVAEDGSLLPSVRKALIDNLYFKTPPLPWRNGGSVNEFNQLYSFTDVSGNTTWWYAPGATVSNPVVMRDSPINDGKFKVFLDKTNIADIYAPLNSPNFVGNPRVPTPAPGDNSQSIPTTGWVQSEMEGLEDLIISSMRGEFENITVRNDAILQDTYINGEFIVTSDKLAAANTEATFRRIRMVGTGTTGTAATEIAFEQNTTPPPGVSTKTNIKPFAVSTGILTVDQINGKAAQVGDVAVSTDSLNVDGYMRGDYLHLEGNNRNTAGRPQLIVDGIAEIETLRVTGTIEGVKADVDGLDIHPRSVIVDEGLTVAKDTTMTGKLTVGGTTKVGNLEVTGTLSGVAISVDGKDIKPRSVNTGNLVATGDVQISGTTTATGKITTQDLEVLGTLTANLDLSGSDLSVDNINVAQTATITDLVVTGTTTGVKGDVEGEAIAPASVAATGTVSAASMSTTGNMAVGGNLTITGDFRPASVAGQDTPRLVVQGDSDLQGDLNVSGTITGVVDLTAQDINMNSLGLAQGLTAGGGITSFSTVKGVNGVFGEGSTAPGAIGLQSMTNAKVATDLLVGEDLRVEGDTNLFGNLSVTGTITGNMNFSGKTIAPATVNATTVTATNLTVTGTIDLTDSPIVAQEITATNVEATGKMVAGKYSTTPKTANATTATFTPDGTTSIYNVNVQADTEVQAPAGLLSSGKGESIFIYFEQDTTGHAVTFSSAFVVHNAATVSNAANSITIANLVYRGTGPLIDVFLTGR
Physico‐chemical
properties
protein length:793 AA
molecular weight: 81883,24090 Da
isoelectric point:4,42806
aromaticity:0,04666
hydropathy:-0,01917

Domains

Domains [InterPro]
DC_0062
STR
2–426
DC_0062 DC_0092
IPR058969
ATT
14–120
IPR058969 DC_0062 IPR058970
YP_007392703.1
1 793
Architecture
STR
ATT
STR
STR 2-13 | ATT 14-120 | STR 121-793
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pectobacterium phage phiTE
[NCBI] 		1116482 Uroviricota > Caudoviricetes > Vequintavirinae > Certrevirus phiTE >
Host Pectobacterium atrosepticum SCRI1043
[NCBI] 		218491 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Pectobacterium

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_007392703.1 [NCBI]
Genbank nucleotide accession
NC_020201 [NCBI]
CDS location
range 138688 -> 141069
strand +
CDS
GTGTCATCAAATACCGATATCATTGCCCTGTTGAGCAGCGATGCTGACAAGGCAGTTGACCAGATCATCGAAGACTCCAAACGTCTTCACATCGTGGTCAACGGAACAGGTACGGAGCAGGCAGTGGCAGAAGACGGGAGCTTGCTCCCTTCTGTCCGTAAAGCCCTCATCGACAACCTGTATTTCAAAACCCCACCCCTGCCGTGGAGAAATGGTGGCTCTGTCAACGAGTTCAACCAGCTTTATTCCTTCACTGACGTAAGCGGAAACACCACGTGGTGGTATGCGCCGGGCGCTACAGTTTCAAATCCGGTTGTCATGCGTGACAGCCCGATCAATGACGGTAAGTTCAAGGTGTTCTTGGACAAGACCAACATTGCAGACATCTACGCACCGCTGAACTCCCCTAACTTCGTTGGCAACCCTCGTGTTCCGACGCCTGCGCCGGGAGACAACAGCCAGTCCATCCCAACTACGGGATGGGTTCAGAGCGAGATGGAGGGTCTTGAAGATCTGATTATCTCCTCCATGAGGGGTGAGTTCGAGAACATCACTGTCCGTAATGACGCGATTCTTCAGGACACGTACATCAACGGCGAGTTCATCGTTACCAGCGACAAGCTGGCAGCAGCGAACACCGAGGCCACCTTCCGCCGTATTCGTATGGTCGGGACCGGGACTACTGGGACAGCGGCTACGGAAATTGCTTTCGAGCAGAACACCACCCCTCCTCCGGGAGTTAGCACAAAGACTAACATTAAACCGTTCGCCGTGTCAACTGGTATTCTGACGGTTGACCAGATCAATGGTAAAGCCGCCCAGGTCGGTGATGTGGCTGTGTCTACTGACTCCCTGAATGTGGATGGCTACATGCGTGGGGACTATCTCCACCTGGAGGGGAACAACCGAAACACTGCGGGTCGTCCACAACTGATCGTCGATGGTATCGCAGAGATCGAAACCCTGCGTGTGACCGGGACCATCGAAGGGGTAAAAGCCGACGTTGACGGACTTGACATCCACCCACGTAGTGTTATAGTGGATGAGGGTCTGACTGTTGCAAAAGACACCACTATGACCGGGAAACTGACAGTTGGTGGAACCACCAAGGTCGGCAACCTCGAAGTGACAGGCACTCTGTCTGGTGTGGCAATCAGTGTTGATGGTAAGGACATTAAGCCGCGCTCTGTGAACACAGGTAATCTGGTTGCGACGGGTGATGTGCAGATCAGCGGCACCACTACTGCAACAGGCAAGATCACCACTCAAGACCTCGAAGTTCTGGGAACCCTGACGGCAAATTTGGACCTGTCTGGTTCAGACCTGAGTGTTGATAACATCAATGTGGCCCAGACGGCAACGATCACGGACCTCGTCGTGACCGGAACAACCACGGGTGTTAAGGGGGATGTTGAGGGTGAGGCAATTGCACCTGCAAGCGTCGCAGCAACCGGGACTGTCTCTGCTGCTTCCATGTCCACCACAGGAAACATGGCGGTTGGTGGTAACCTGACCATAACGGGTGACTTCCGCCCGGCGAGCGTTGCTGGTCAAGATACACCTCGCTTGGTTGTTCAAGGTGACTCTGATCTCCAAGGAGACCTGAATGTCTCCGGGACTATCACCGGAGTTGTTGACTTGACGGCGCAAGACATTAACATGAACAGCCTTGGGCTGGCTCAGGGTCTTACTGCCGGGGGGGGTATTACTTCTTTCTCTACCGTAAAAGGTGTCAACGGTGTCTTTGGTGAAGGTTCTACGGCCCCTGGTGCCATCGGCCTTCAGTCCATGACTAATGCGAAGGTTGCAACAGACCTTCTTGTTGGTGAAGACCTTCGTGTAGAGGGTGACACAAACCTGTTTGGTAACTTGTCTGTGACAGGAACCATTACAGGAAACATGAACTTCTCAGGTAAAACAATCGCCCCGGCGACTGTTAACGCGACTACGGTCACGGCTACCAACCTGACAGTCACTGGAACCATTGATCTGACCGATAGCCCTATCGTGGCTCAAGAAATTACCGCGACAAACGTCGAAGCAACTGGTAAAATGGTTGCAGGTAAGTATTCTACCACACCGAAGACTGCCAATGCAACAACGGCGACGTTTACTCCAGATGGGACTACAAGCATCTACAACGTCAACGTGCAGGCAGACACAGAGGTTCAGGCCCCTGCTGGGTTGCTGTCTTCAGGTAAAGGAGAGTCAATCTTCATTTACTTCGAGCAAGATACGACTGGACATGCGGTAACGTTCAGCAGCGCGTTCGTTGTTCACAACGCTGCGACTGTCAGCAACGCTGCAAACTCCATTACGATCGCTAACCTCGTGTATCGTGGAACTGGCCCGCTGATCGATGTGTTCTTGACCGGACGCTAA

Genome Context

Genome Context

Tertiary structure

1 / 3
PDB ID
Source
Method
Resolution
Oligomeric State

Literature

Title Authors Date PMID Source
Escape from toxin-antitoxin mediated abortive infection can occur by recombination within a generalized transducing phage of Pectobacterium atrosepticum Blower,T.R., Evans,T.J., Przybilski,R., Fineran,P.C. and Salmond,G.P.C. 2023-06 — GenBank