Protein

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UniProt accession
A0A1B1PAL6 [UniProt]
Protein name
Pre-neck appendage protein
RBP type
TSP
Evidence GenBank
Probability 1,00
TSP
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MSNVRKVGSLPTSSYRRYLPSAFDESMNIYEQLITCIEYVNNLGISFNELVDWLDEVVLQQNERLDEQDKKIDMLRDEWHIFEDYVINTLLKKKVVEVLKEWLEDGTLAEIINNDVMNMKVDKAGTVYVKDFKKLETETDDTGRIKRAIEELKKDENSNLLFEPIKYVVSEGFEVPSNKVIRGYKGKTVIDGKNIETATTLYQKGLFHVKGTLADPIGLAQSVAQGDSKIVAPACDALLIGDLLIITSDESYVEGAPPSSRRGEIVTVKSFDGSNIELQGEVYFSYDQTKNARVQCMRGMKDVTIKDLDIIMGGKGKGHNGVIVENAQRIIIKNVFIDGAEDCGVVMTNCYNSHVYKSDIINNTSPGGTIGTSGYGVAFLSSKECSARDNFFRNSRHAIAGGGFIPAFACDITGNKAVDCPQYAYDCHEPCFFWNFSNNSATSCVGGFTIRGQHTRVVGNTITSTFANGILVESFTPVDNQKGTLIANNTIQYSKLNGIYCDGTNAIQTDLTIIGNKVSDVKFAGINVYNLTNAIIEGNTTVNDYENGIRVLGRATGYRSKKLVIKGNTVYKSRFSNIRVAGVDNVVISGNNVETNTKDGIELFGAKEFIVDGNLVKDCEFYGIRSEESTNGSYTNNYLKTVRGENSDGLRIIKGGKIVMNGNTVVDPKRFGIYTTDTLYTIITSNNVYDCPSDGVKIDGPIKTHINQNNLTKAIDA
Physico‐chemical
properties
protein length:717 AA
molecular weight: 79069,34260 Da
isoelectric point:5,43440
aromaticity:0,08368
hydropathy:-0,27810

Domains

Domains [InterPro]
DC_0396
ATT
1–202
DC_0396 IPR006626 IPR006626 IPR006626 IPR012334 IPR012334
Coil
Unmapped
58–78
Coil IPR011050 IPR039448
IPR006626
Unmapped
452–474
IPR006626 IPR051550
IPR006626
Unmapped
481–503
IPR006626 IPR006626 IPR006626 IPR012334
IPR011050
STR
510–711
IPR011050
IPR006626
Unmapped
560–582
IPR006626 IPR006626 IPR006626 IPR006626 IPR006626 IPR006626
A0A1B1PAL6
1 717
Architecture
ATT
STR
ATT 1-202 | STR 203-711 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
A0A1B1PAL6
1 717
Domain Start End Length (AA) Confidence
N-terminal 1 141 141 0,9906
Central domain 142 706 566 0,9945
C-terminal 707 717 10 0,1412
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-141
Central
142-706
C-terminal
707-717

Taxonomy

  Name Taxonomy ID Lineage
Phage Bacillus phage Claudi
[NCBI] 		1874001 Uroviricota > Caudoviricetes > Salasmaviridae > Claudivirus > Claudivirus claudi
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ANT41189.1 [NCBI]
Genbank nucleotide accession
KX349900 [NCBI]
CDS location
range 19063 -> 21216
strand +
CDS
ATGAGTAATGTTAGAAAAGTTGGTTCTTTACCAACAAGTTCTTACAGAAGATATTTACCGAGTGCTTTCGATGAATCAATGAACATTTATGAACAACTTATTACATGTATTGAATATGTTAATAATCTTGGTATATCTTTCAATGAATTAGTTGATTGGTTAGATGAAGTTGTATTACAGCAGAATGAAAGACTAGATGAACAAGATAAAAAGATTGATATGTTGCGTGATGAATGGCATATTTTTGAAGATTATGTTATTAATACTCTTCTAAAGAAAAAGGTTGTTGAAGTTCTTAAAGAATGGCTAGAAGATGGAACACTTGCTGAAATAATTAACAATGATGTAATGAATATGAAAGTAGATAAAGCTGGGACAGTTTATGTGAAAGACTTTAAGAAATTAGAAACTGAAACAGATGATACTGGAAGAATTAAAAGAGCAATTGAAGAATTAAAGAAAGATGAAAATTCTAATCTTTTATTCGAACCAATTAAATATGTTGTGTCTGAAGGTTTTGAAGTTCCATCTAATAAAGTTATTAGAGGTTATAAAGGTAAAACTGTTATTGATGGTAAAAATATTGAAACAGCTACTACATTATATCAAAAAGGATTATTCCATGTAAAGGGAACTCTTGCTGACCCTATTGGTTTAGCTCAAAGTGTTGCTCAAGGAGATAGTAAAATTGTGGCACCTGCTTGTGATGCTTTGTTAATTGGTGATCTACTAATTATAACAAGTGATGAATCTTATGTTGAAGGCGCACCTCCTAGTTCTCGTAGAGGTGAAATTGTAACAGTAAAGTCATTTGATGGTTCAAATATTGAATTACAAGGTGAAGTTTACTTTAGTTATGATCAAACTAAAAACGCTAGAGTTCAATGTATGCGAGGAATGAAAGATGTAACAATTAAAGATTTAGATATCATTATGGGTGGTAAAGGAAAAGGTCATAATGGTGTTATTGTTGAGAATGCTCAACGAATCATTATTAAAAATGTGTTTATTGACGGTGCTGAAGATTGTGGAGTTGTTATGACAAACTGTTATAACTCACATGTTTATAAATCAGATATCATCAATAATACATCACCCGGTGGAACAATTGGAACAAGTGGTTATGGTGTTGCTTTCTTATCATCAAAAGAATGTTCGGCTAGGGATAATTTCTTTAGAAATTCACGACATGCTATTGCAGGTGGTGGTTTCATTCCAGCATTTGCTTGTGATATTACAGGAAATAAAGCTGTTGATTGTCCACAATATGCTTATGATTGCCATGAACCTTGTTTCTTCTGGAACTTCTCAAATAACTCGGCAACATCTTGTGTAGGTGGTTTCACTATTCGTGGTCAACATACCAGAGTAGTAGGAAACACAATTACAAGTACGTTTGCAAATGGTATTTTAGTTGAAAGTTTCACTCCAGTTGACAATCAAAAAGGAACATTAATTGCTAATAACACCATCCAATATTCTAAATTAAATGGTATTTATTGTGACGGAACAAATGCAATTCAAACTGATTTAACGATTATTGGAAATAAAGTTAGCGATGTTAAATTTGCGGGAATTAATGTTTATAACTTAACAAATGCGATTATTGAAGGTAATACAACAGTAAATGATTATGAAAATGGTATTCGTGTCTTAGGTAGAGCAACTGGATATAGAAGTAAAAAACTAGTTATAAAAGGTAATACAGTTTATAAGAGTCGATTCTCAAATATTCGTGTTGCAGGTGTTGATAATGTAGTTATCAGCGGCAATAATGTTGAAACAAACACAAAAGATGGTATTGAATTATTTGGAGCTAAAGAATTTATTGTTGATGGTAACTTAGTTAAAGATTGTGAATTCTATGGAATACGATCTGAAGAGTCAACAAATGGTTCTTATACAAATAACTATTTAAAAACTGTTCGCGGTGAAAACTCAGATGGTTTACGTATTATCAAAGGTGGAAAGATCGTTATGAATGGTAACACTGTTGTTGATCCTAAACGTTTTGGTATTTACACTACTGATACTCTTTACACAATTATTACTTCTAACAATGTATATGATTGTCCTTCTGATGGTGTGAAAATTGATGGGCCGATTAAGACTCATATCAATCAAAATAACTTAACAAAGGCTATTGACGCTTAA

Genome Context

Genome Context

Gene Ontology

Description Category Evidence (source)
GO:0044423 virion component Cellular Component IEA:UniProtKB-KW (UniProt)
GO:0051701 biological process involved in interaction with host Biological Process IEA:UniProtKB-ARBA (UniProt)
GO:0019058 viral life cycle Biological Process IEA:UniProtKB-ARBA (UniProt)

Tertiary structure

PDB ID
2882d7f847f5fdd10c2552a653b52eddb238f2960f912fc3568e862d62904955
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8416
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50