Protein

Genbank accession
AGK86519.1 [GenBank]
Protein name
RNA polymerase [Synechococcus phage S-CBP1]
RBP type
TF
Evidence RBPdetect2
Probability 1,00
Protein sequence
MATPAQIEEQVQLERDQIKQGVRKLRENTRKLEEKSYASATVYGVASMDALLPKLIARLDETNLRLTKGQAGVAFREIQCYIKDLEPLAAAAIALKVTFDKVFSVKEGSDQLTEVCDAIGSAVEAECQMRHYERSAPGLLAALKKNYWHRSCGTHQKLVVIRTLMNRYEVDEWKGWGRANRVKLGGWLLDCIIHTSNWFTKEIRREGRKTNNYIVPTPEFLEIKEKLIQDSELFAPLAWPMLIEPNDWTNDHPGGYLLNEVMRGHDLVRRGNPTRIQGETPLAFLNKIQKVAFRLNPFIVGVAEELSRLERSVGKFLPIIHHELPAKPADIETNYDSRKDYRRRAAEVMNRNAQEFKKSCRTRMTMEAVARFKNVSRFFIPWSFDYRGRAYPIPAFLTPQDTDFGKSLLRFADESYMTPESEDWLAFQVATCYGLDKATMAERLEWTYANFTLITRVATDPIGSLPEWEVADEPWQFLAACEEFYHCVIAADRQFTGLMVATDATCSGLQILAGLARDKSTARLVNVLPGDKPQDAYKVVAETATPHCPESIKPYMDRKTVKRVVMTVPYNAKPFSNRGYIREALKEKGVEISKEDLTATVKAVRDAMKQVVPGPMDVMEWIEKEVATAIKNGKTELEWITPSGFVVHQKLNKKQVETMELQLLGRCKVTVATGDTDEVDLNHHKNATSPNLIHSLDASLLHLSVLKFDAPIALIHDSVLCRATDMSILSTRVRETYMHLFAEHDYLRDFAQQIGAETEPPIIGDLEPESVIESTYFFC
Physico‐chemical
properties
protein length:779 AA
molecular weight: 88503,50020 Da
isoelectric point:6,36440
aromaticity:0,08601
hydropathy:-0,33325

Domains

Domains [InterPro]

No domain annotations available.

Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage S-CBP1
[NCBI] 		1273711 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AGK86519.1 [NCBI]
Genbank nucleotide accession
KC310802.1 [NCBI]
CDS location
range 4255 -> 6594
strand +
CDS
TTGGCAACACCAGCACAGATAGAAGAACAAGTACAGCTTGAAAGAGATCAGATCAAGCAAGGGGTGCGCAAGTTGCGTGAGAACACCCGAAAGCTTGAAGAAAAAAGTTACGCCAGTGCCACTGTCTATGGCGTTGCATCAATGGATGCACTCCTACCTAAGTTAATTGCACGCCTAGATGAGACCAACCTTCGACTAACTAAAGGTCAAGCAGGCGTAGCATTTCGTGAGATCCAGTGTTACATCAAAGACTTGGAGCCACTCGCTGCTGCAGCCATTGCATTGAAGGTCACCTTCGACAAGGTGTTCAGTGTTAAGGAAGGCAGTGATCAACTCACTGAAGTATGTGATGCAATCGGTTCAGCTGTTGAAGCTGAGTGTCAGATGCGTCACTACGAACGCAGTGCTCCTGGGTTACTTGCTGCACTCAAGAAGAACTACTGGCACCGCTCATGCGGTACGCATCAAAAGCTCGTTGTCATTCGTACACTAATGAATAGGTACGAGGTCGATGAGTGGAAGGGATGGGGCAGAGCTAATCGTGTGAAGCTTGGTGGGTGGTTGCTTGATTGCATTATTCATACAAGCAACTGGTTCACGAAAGAGATCAGACGTGAGGGTCGCAAGACTAACAACTACATTGTCCCTACACCTGAGTTCCTTGAGATCAAGGAGAAACTTATCCAGGACTCTGAGCTGTTCGCACCGTTGGCTTGGCCAATGTTGATCGAACCTAACGACTGGACTAATGATCATCCAGGTGGTTACTTGCTTAATGAGGTTATGCGAGGTCATGATCTTGTGCGGCGGGGTAACCCCACCCGTATACAGGGGGAGACGCCACTCGCTTTTCTGAACAAGATTCAGAAGGTTGCCTTTCGCCTTAACCCATTCATTGTGGGTGTGGCAGAGGAGCTAAGCAGACTGGAACGCTCAGTTGGCAAGTTCCTACCTATCATTCATCACGAGCTGCCTGCTAAACCTGCTGACATTGAAACTAACTACGATAGTCGTAAGGATTATCGGAGACGAGCAGCAGAGGTGATGAATCGCAATGCGCAGGAGTTCAAAAAATCCTGTCGCACTCGTATGACTATGGAGGCGGTTGCACGTTTCAAGAATGTGAGCCGCTTCTTTATTCCATGGTCGTTCGATTATCGTGGAAGAGCTTATCCGATTCCTGCATTCCTCACACCTCAAGACACTGACTTCGGTAAGAGTCTATTGAGGTTTGCGGATGAGTCGTACATGACTCCTGAATCAGAGGATTGGTTAGCCTTCCAAGTAGCTACTTGCTATGGTCTCGATAAGGCCACGATGGCCGAGCGTCTTGAGTGGACGTATGCAAACTTCACACTCATCACGCGCGTTGCTACTGACCCCATTGGATCATTACCTGAATGGGAAGTAGCCGACGAACCATGGCAATTTTTAGCAGCATGTGAGGAGTTCTATCATTGCGTGATCGCAGCTGATAGACAATTCACAGGCCTTATGGTGGCTACTGATGCAACCTGCTCAGGGTTACAGATCCTGGCAGGGTTAGCTCGGGATAAGTCCACAGCACGTCTTGTTAATGTCTTGCCTGGTGATAAACCACAAGATGCTTACAAGGTCGTAGCAGAGACAGCTACACCACATTGTCCTGAAAGCATTAAGCCTTATATGGACAGGAAAACGGTCAAAAGGGTAGTTATGACTGTCCCTTACAATGCTAAACCGTTTTCTAATCGTGGGTACATCAGGGAAGCTCTCAAAGAAAAGGGTGTCGAGATCTCTAAAGAGGATCTAACTGCCACAGTCAAAGCAGTCAGGGATGCGATGAAACAAGTCGTACCCGGACCTATGGATGTGATGGAGTGGATCGAGAAAGAAGTAGCTACTGCTATCAAGAATGGCAAGACAGAACTTGAGTGGATCACACCATCAGGGTTTGTCGTGCATCAAAAGCTGAACAAGAAACAGGTAGAGACGATGGAGTTACAGCTCCTTGGTCGCTGCAAGGTGACAGTTGCAACAGGAGATACCGATGAGGTTGATCTCAACCACCACAAGAATGCAACTAGCCCAAACCTCATTCACAGTTTAGATGCCAGCCTGTTACATCTTTCTGTCTTGAAGTTCGATGCTCCCATTGCTCTTATCCATGACTCTGTACTGTGCAGGGCTACTGATATGTCTATCTTGTCCACTCGCGTACGAGAAACATACATGCACCTCTTTGCAGAGCACGACTACCTCCGCGACTTCGCTCAACAAATAGGAGCGGAGACAGAACCACCGATCATTGGCGACCTAGAGCCCGAGTCAGTGATTGAATCCACCTACTTTTTCTGTTAA

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

No tertiary structures available.

Literature

No literature entries available.