Protein

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Genbank accession
YP_010767148.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,89
Protein sequence
MTFSVHGSATGGYAVGPVENAFEGVDLAAAQAARDAYFASNPTKLAAYDSNPFYLIRLTYGATTNAEYRMGGQWIDYTPFLQGLPGEVASLANVPVGELPYKTLDGTFAGSRMRVLDDGSLLAPPGFGVESGSVKFGDVLLLSEAAGFLSISNLINERPYTILDYYTPRDAASAVPTAFMASAPAFGFVAQPDDSVNMTDEPLLFDYTIQNTSRTYSLFMRAFAAMSNVRIKITQISNGVALKYLPSKEAWETEEGGLEWIIGDNTFDFGDTPLIFNTGQNIRFEIRATTMSLKGNASGIPYFGGSDQLGEFRDVLMADQYTATDVRDKLATLTGTNRLPMSAIKDGVVSVAGRLGAIVLTASDVAGLSTVATTGAYSSLSGLPFIPTNTSQLTNGANFITAAQAPVQSVQGYTGAVVLARSDIGLGNVDNTSDINKPTSTAQQTSIDVKMSQHNAAVDPHPQYTTVAEASAAAPIQSIVNGRGITASTLTGVTTVGSTEFPLVFNGSGAASSPKIWYGTATSDVNGVFIVDISSAGFTLAPTVTVSATLTTVTLTDRAWATLASVTATTASGYTLRGINLSGNGATVRLAPNTTVNIMAIGI
Physico‐chemical
properties
protein length:603 AA
molecular weight: 63042,93550 Da
isoelectric point:4,61978
aromaticity:0,08789
hydropathy:0,10415

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage phiPsa397
[NCBI] 		1460367 Uroviricota > Caudoviricetes > Vandenendeviridae > Otagovirus > Otagovirus psa397
Host Pseudomonas syringae pv. actinidiae
[NCBI] 		103796 Bacteria > Proteobacteria > Gammaproteobacteria > Pseudomonadales > Pseudomonadaceae > Pseudomonas

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010767148.1 [NCBI]
Genbank nucleotide accession
NC_073683.1 [NCBI]
CDS location
range 31006 -> 32817
strand +
CDS
ATGACATTCTCTGTTCACGGTAGTGCAACTGGCGGATACGCTGTTGGCCCAGTAGAGAATGCTTTCGAAGGTGTTGACCTTGCTGCTGCACAGGCAGCACGTGACGCATACTTCGCATCCAATCCAACTAAACTGGCTGCTTACGACAGCAATCCATTCTATCTAATCCGTCTAACATATGGTGCTACAACAAACGCTGAGTACCGTATGGGAGGCCAGTGGATCGACTACACACCTTTCCTACAAGGATTGCCGGGAGAAGTTGCTTCTCTGGCTAACGTGCCTGTAGGTGAGCTTCCATACAAAACACTTGATGGTACATTCGCAGGTTCTCGTATGCGTGTGTTGGATGATGGTTCTCTCCTAGCTCCACCGGGCTTTGGTGTTGAATCTGGTTCTGTTAAGTTTGGTGACGTACTGTTGCTATCTGAGGCTGCTGGATTCCTATCTATCAGCAATTTGATTAATGAACGTCCATACACAATCCTTGACTACTACACACCACGTGATGCCGCCTCTGCCGTTCCAACAGCATTTATGGCTTCTGCACCAGCATTCGGCTTTGTGGCACAGCCTGATGACAGTGTTAACATGACAGATGAACCACTGTTGTTTGACTACACAATCCAGAACACTTCCCGCACTTACTCCCTGTTTATGCGTGCATTTGCAGCAATGTCTAACGTCCGAATCAAGATTACCCAAATCTCTAACGGCGTTGCACTGAAGTATCTGCCATCTAAAGAAGCTTGGGAAACTGAGGAAGGTGGGCTTGAGTGGATTATTGGAGACAATACATTCGACTTTGGTGATACACCGCTTATCTTCAACACAGGACAAAACATCAGATTTGAAATCCGTGCCACAACTATGTCGTTGAAAGGTAACGCATCTGGCATTCCATACTTCGGAGGCTCTGACCAACTAGGTGAGTTCCGTGACGTGCTTATGGCTGACCAGTACACAGCAACTGACGTTAGAGACAAGCTGGCAACACTCACCGGCACCAACAGACTACCAATGAGCGCCATTAAAGATGGTGTTGTAAGTGTCGCTGGGCGCCTCGGTGCGATTGTACTGACAGCATCTGACGTAGCTGGACTGTCCACTGTTGCAACAACTGGGGCTTACTCTAGCCTGTCTGGTCTGCCGTTCATTCCTACAAACACAAGCCAGCTAACCAACGGAGCCAACTTCATCACTGCTGCTCAAGCTCCAGTGCAAAGTGTCCAAGGTTACACTGGTGCTGTTGTTCTCGCAAGGTCGGATATTGGACTTGGAAACGTAGACAACACGTCTGACATTAACAAACCAACGTCTACAGCACAGCAAACATCCATCGACGTGAAGATGTCTCAGCACAACGCTGCTGTTGATCCTCACCCACAATACACAACTGTTGCCGAAGCTTCTGCTGCGGCTCCAATCCAGAGTATTGTTAACGGTAGAGGTATTACCGCATCGACTCTTACTGGTGTAACAACCGTAGGATCGACTGAGTTCCCTCTTGTGTTCAATGGTTCTGGTGCTGCTTCTTCACCAAAGATTTGGTATGGAACTGCAACGTCCGATGTAAACGGAGTGTTCATTGTTGATATCTCTTCCGCTGGATTTACGCTAGCTCCAACTGTCACTGTGTCTGCTACCCTTACAACAGTGACTCTAACTGACAGAGCATGGGCAACACTCGCTTCTGTAACTGCAACAACCGCATCTGGTTACACCCTACGAGGCATCAACCTATCGGGTAACGGGGCAACCGTAAGGCTAGCTCCAAACACAACAGTCAATATCATGGCTATCGGTATTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
b107cbc2db61dd33df379ef069841c71701cc9e4d275871825e54cada710b345
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5628
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization of Pseudomonas phiPsa374-like phages Warring,S., Malone,L.M., Easingwood,R.A., Rigano,L., Frampton,R.A., Lopez Acedo,E., Templeton,M.D., Kleffmann,T., Bostina,M. and Fineran,P.C. 2024-10 — GenBank