Protein

View in Explore
Genbank accession
QIG63148.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,66
Protein sequence
MSCKYDIIDEGGRKRVRALRPFTVQGRDVCPMELGGYVYDANTLSQDGNCWIFSGSLEYPGVRVMDEAIVDMGVNLASPVAARPKSVVISGNSRIMGPIQFTGAETTSQVGVVWEQGGYTASVGMIPVKASDGSRIRIPASVFGGSAGKVAITSASYEARIISIDSDGLVTSGGTWTAGGPAVTLTTTSPNFLVEVRKTPSAAITPADVATAGVTVTTALETSLEVTNSSIITLYNGLIASGANVLAFRVSDGKSTVQNSSIRTEAFATSSNALNFLADFDKVNAIFTPTAGSGTTINGIYIRSNVTAPGSMTSTGLTKSRQFVVKDCPEFTWSATVFPDIAAFGPSGKAFTFNRCNMPAGSAIHYYDPKVNVWDNIDFTKAMADLGKTAFANTTIVSSNVQGMYRARENTSGVMGGLLEAASSFDGATYSGVPGATYDSIIYKDCVIKGTFTIIGRNVFGGTRDGASRITNTAETAMVIDGNFRIEGNAQVTDTFLKGTGYIGDNAELKNGLVWGYIYMADNAKYIPAAVTNAAIIKHLIMTGNSKVLKQRDVSNNNVKLELSDNAVIDSRASTDQGFLKMSGNAYLYNAGTSVTPVVYGTLEMKDNAKQVGGILTVHGDVTICGGYEQTSGSLTIRGKRTISDVSQIGETDLPPTKITW
Physico‐chemical
properties
protein length:661 AA
molecular weight: 69681,78730 Da
isoelectric point:6,08611
aromaticity:0,08018
hydropathy:-0,01120

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QIG63148.1
1 661
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,0055
Central domain 11 624 615 0,8613
C-terminal 625 661 36 0,5397
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-624
C-terminal
625-661

Taxonomy

  Name Taxonomy ID Lineage
Phage Bacteroides phage ARB14
[NCBI] 		2710493 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Bacteroides thetaiotaomicron VPI-5482
[NCBI] 		226186 Bacteroidota > Bacteroidia > Bacteroidales > Bacteroidaceae > Bacteroides > Bacteroides thetaiotaomicron

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QIG63148.1 [NCBI]
Genbank nucleotide accession
MT074134 [NCBI]
CDS location
range 2476 -> 4461
strand +
CDS
ATGAGTTGTAAGTATGACATTATCGATGAAGGCGGGCGTAAACGGGTAAGAGCGTTGCGTCCCTTCACGGTACAAGGACGGGACGTTTGCCCGATGGAACTAGGCGGATACGTCTACGATGCTAACACGTTGTCGCAGGACGGTAACTGTTGGATATTTAGCGGATCACTGGAATACCCCGGTGTTCGCGTTATGGACGAGGCTATCGTGGATATGGGGGTCAACCTCGCTTCCCCGGTTGCGGCCAGGCCGAAGAGCGTGGTTATTTCCGGTAATTCGCGCATCATGGGACCCATTCAGTTTACGGGAGCCGAGACTACCAGTCAGGTAGGCGTCGTTTGGGAACAAGGCGGATACACCGCATCGGTGGGAATGATACCCGTCAAGGCTTCCGACGGTTCGCGAATCCGAATCCCCGCCTCCGTATTTGGGGGGTCTGCGGGAAAGGTGGCCATCACGAGCGCGTCGTACGAGGCGAGAATAATCTCTATTGACTCGGATGGGCTTGTGACAAGCGGGGGGACCTGGACCGCAGGAGGACCCGCGGTTACCCTTACAACGACATCACCGAATTTCTTGGTAGAGGTGAGAAAGACCCCTAGCGCCGCTATCACCCCGGCAGACGTAGCGACGGCGGGTGTGACGGTAACCACGGCTTTGGAGACTAGCCTAGAGGTTACTAACTCGTCCATCATCACCTTGTACAATGGCTTGATAGCGAGCGGTGCGAATGTCCTTGCTTTTCGGGTGTCTGATGGCAAAAGCACCGTTCAAAACTCGAGTATCCGTACAGAGGCTTTCGCAACGTCTAGTAACGCATTGAACTTCCTAGCGGATTTCGATAAGGTGAATGCTATTTTTACGCCAACAGCGGGATCAGGTACGACTATTAACGGGATATACATTCGCTCGAATGTCACTGCACCCGGAAGCATGACATCAACGGGACTCACGAAATCCCGCCAATTCGTCGTTAAGGATTGCCCGGAATTTACGTGGAGTGCTACGGTGTTCCCCGATATAGCGGCTTTCGGGCCTAGCGGAAAGGCATTCACATTCAACCGCTGCAACATGCCCGCAGGTTCGGCGATTCACTACTACGATCCGAAGGTGAACGTATGGGATAACATCGACTTTACTAAAGCCATGGCGGACTTGGGTAAAACGGCGTTCGCAAATACTACTATCGTGTCATCCAATGTACAAGGGATGTACCGTGCTAGGGAAAACACTAGCGGCGTAATGGGCGGACTGTTGGAAGCCGCATCCAGTTTTGACGGTGCAACCTATTCCGGCGTACCGGGTGCTACCTACGACTCCATCATTTACAAGGATTGCGTGATCAAAGGTACTTTCACAATCATTGGTCGCAACGTATTCGGAGGCACGCGGGACGGCGCGTCCAGGATTACCAATACCGCAGAAACGGCGATGGTGATAGACGGAAATTTCCGTATCGAAGGGAACGCGCAGGTAACCGATACGTTTCTCAAGGGTACAGGCTACATCGGTGACAATGCCGAACTGAAGAACGGCTTGGTATGGGGGTACATTTACATGGCGGACAATGCGAAGTATATTCCGGCAGCGGTTACGAATGCCGCTATCATTAAACATTTAATCATGACGGGCAATTCGAAAGTTCTCAAACAACGGGACGTATCTAACAATAACGTTAAACTGGAACTGTCTGATAATGCGGTGATTGATTCCAGGGCGAGCACCGACCAAGGATTCCTTAAAATGTCGGGCAATGCGTACCTTTACAACGCCGGCACAAGCGTAACGCCAGTTGTGTATGGGACTTTAGAAATGAAAGATAACGCTAAACAGGTAGGGGGGATCCTAACGGTGCACGGCGATGTTACGATTTGTGGCGGTTACGAACAGACATCGGGGTCTTTGACTATTAGGGGTAAACGTACGATCTCTGATGTATCACAGATCGGCGAAACGGATTTGCCACCGACTAAAATAACTTGGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
99690043bd5ccbb9a198b908f2599b5df619aca14b12c3f1748f2b00575851da
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,4238
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Bacteroides thetaiotaomicron-infecting bacteriophage isolates inform sequence-based host range predictions Hryckowian,A.J., Merrill,B.D., Porter,N.T., Van Treuren,W., Nelson,E.J., Garlena,R.A., Russell,D.A., Martens,E.C. and Sonnenburg,J.L. 2020 32652063 GenBank