Protein

View in Explore
Genbank accession
ADO97646.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,83
Protein sequence
MSTVKTATIEGTSDNDFVVVVPTDGNLIIGGGLEFGSDANLSIPVGNTAQRPSGQALQTGMIRFNTDVGFIEVYTGANWINFGETAASGGYVDLGTQANPASSALAIKRQYPNAPDGVYWINPSGTGGDAFSATQVYCDMTTDGGGWMMVAYAGNINTNKTNTVGSNYLPLFNTYGTLSSTAKTNRTAFSRMDFAKAIEGASDTSQMMARRTECQSKIFIWEITELNRFDTTSNVNWTFPANNIGTVIRKCRMSNKGPLGLVSRDYIAGEADRVRYENGPSYPGIAWNSSFNANNDNSGSFEQFLVRRSILYWETNENSYQANQWFHADPMHLAASRGPDNGVQDMEFYFREEEPGFS
Physico‐chemical
properties
protein length:358 AA
molecular weight: 39084,65460 Da
isoelectric point:4,73551
aromaticity:0,11453
hydropathy:-0,40950

Domains

Domains [InterPro]
DC_1111
ATT
2–119
DC_1111 DC_1775
G3DSA:2.60.120.1000
STR
91–216
G3DSA:2.60.120.1000
G3DSA:2.60.120.1000
STR
91–220
G3DSA:2.60.120.1000
PTHR16146
Unmapped
93–255
PTHR16146
IPR000885
Unmapped
95–143
IPR000885
IPR036056
STR
98–155
IPR036056
NF040941
Unmapped
103–150
NF040941
ADO97646.1
1 358
Architecture
ATT
STR
RBD
ATT 2-119 | STR 120-220 | RBD 256-358
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
ADO97646.1
1 358
Domain Start End Length (AA) Confidence
N-terminal 1 142 142 0,3018
Central domain 143 341 200 0,0487
C-terminal 342 358 16 0,9744
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-142
Central
143-341
C-terminal
342-358

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage S-ShM2
[NCBI] 		445683 Uroviricota > Caudoviricetes > Pantevenvirales > Ahtivirus > Ahtivirus sagseatwo
Host Synechococcus sp. WH 8102
[NCBI] 		84588 Bacteria > Cyanobacteria > Oscillatoriophycideae > Chroococcales > Synechococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ADO97646.1 [NCBI]
Genbank nucleotide accession
GU071096 [NCBI]
CDS location
range 31327 -> 32403
strand +
CDS
ATGAGTACAGTAAAAACAGCGACTATTGAGGGAACATCCGATAACGATTTTGTCGTTGTCGTACCTACTGATGGCAACCTAATTATTGGTGGTGGACTAGAGTTTGGCAGTGATGCAAATCTATCGATTCCTGTAGGAAATACTGCACAAAGACCTAGTGGTCAGGCATTACAAACAGGCATGATTAGATTCAATACTGATGTAGGATTTATTGAGGTCTATACAGGTGCTAACTGGATCAATTTTGGAGAGACTGCAGCATCAGGTGGTTATGTCGATTTAGGAACACAGGCAAATCCTGCATCATCTGCACTTGCTATCAAAAGACAATATCCTAATGCACCTGATGGTGTCTATTGGATCAACCCTAGTGGTACTGGTGGTGATGCTTTTAGTGCTACACAAGTATATTGTGACATGACTACTGATGGTGGTGGTTGGATGATGGTTGCATATGCAGGTAATATCAATACCAACAAAACAAACACTGTTGGTTCTAACTATCTACCATTATTCAATACATATGGTACATTATCTTCTACTGCAAAAACTAATAGAACTGCGTTTTCACGTATGGACTTTGCAAAAGCAATTGAAGGTGCAAGTGATACTAGTCAGATGATGGCACGTCGTACAGAGTGTCAGAGTAAAATTTTTATCTGGGAAATAACCGAACTGAATAGATTTGATACGACATCAAATGTAAACTGGACATTCCCTGCCAACAATATTGGTACTGTTATTCGTAAATGTAGGATGAGCAACAAAGGACCTTTGGGTCTTGTATCTAGAGACTACATTGCAGGTGAAGCAGACCGTGTTCGTTATGAAAACGGACCATCATATCCTGGTATTGCATGGAATTCTAGTTTCAATGCTAATAATGATAATAGTGGTAGTTTTGAGCAATTCTTAGTTCGTCGTTCTATTTTGTATTGGGAGACAAACGAGAATTCATATCAGGCAAACCAATGGTTTCATGCCGATCCAATGCATTTGGCAGCATCTCGTGGTCCTGACAATGGAGTACAGGATATGGAGTTCTATTTCCGAGAAGAGGAACCTGGTTTCTCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
069e73301c6844510665b99c55c26d5db274546199d1a02f6cfe3426716779b4
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5358
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The Genome Sequence of Cyanophage 8102-4 Henn,M.R., Sullivan,M.S., Osburne,M.S., Levin,J., Malboeuf,C., Casali,M., Russ,C., Lennon,N., Erlich,R., Young,S.K., Koehrsen,M., Yandava,C., Zeng,Q., Alvarado,L., Anderson,S., Berlin,A., Borenstein,D., Chen,Z., Engels,R., Freedman,E., Gellesch,M., Goldberg,J., Green,L., Griggs,A., Gujja,S., Heiman,D., Hepburn,T., Howarth,C., Jen,D., Larson,L., Lewis,B., Mehta,T., Park,D., Pearson,M., Roberts,A., Ryan,E., Saif,S., Shea,T., Shenoy,N., Sisk,P., Stolte,C., Sykes,S., Walk,T., White,J., Yu,Q., Coleman,M.L., Huang,K.H., Weigele,P.R., DeFrancesco,A.S., Kern,S.E., Thompson,L.R., Fu,R., Hombeck,B., Chisholm,S.W., Haas,B., Nusbaum,C., Galagan,J. and Birren,B. 2011-09-23 — GenBank