Protein

View in Explore
Genbank accession
WVW77350.1 [GenBank]
Protein name
structural protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MAYVNGSAATFADLKTAIENAAVAAGWTLTSGILSKNGCFFQLIADSSGGYVQLRLHGGTGQSGSTLTGQPASSLGVKMASCAEQVMSFPITYEIHSFTSPDEIYCVINYNSDFYQAVAFGISDIPGIGGTGAWFTGNLRSDVSLTGTGSTSSATRVHMSAGKDSCGSSPYSGMCCPFWFAQSNAGFNFTSYVHTGLDSVAWRVEGSVTAGSGLSGISYAAALLTALPNLSNQATVLVPVKAIAYRLDGGRTIVANPKNVRYMRLDNVVPGEIVTFGADQWKCYPMLRKNATIRNGQTWTNGLAETGTWGYAIKYTGS
Physico‐chemical
properties
protein length:318 AA
molecular weight: 33413,18380 Da
isoelectric point:7,55898
aromaticity:0,10692
hydropathy:0,05472

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WVW77350.1
1 318
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,0295
Central domain 11 209 200 0,0054
C-terminal 210 318 108 0,9994
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-209
C-terminal
210-318

Taxonomy

  Name Taxonomy ID Lineage
Phage Stenotrophomonas phage vB_SmaS_Bhz58
[NCBI] 		3097474 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WVW77350.1 [NCBI]
Genbank nucleotide accession
OR797043 [NCBI]
CDS location
range 16357 -> 17313
strand +
CDS
ATGGCATACGTCAACGGTAGCGCCGCGACTTTCGCGGACTTGAAAACAGCAATCGAAAACGCAGCAGTCGCCGCAGGCTGGACGTTAACTAGCGGCATCCTGTCGAAGAACGGTTGTTTCTTTCAGCTTATCGCGGATTCTTCCGGGGGTTATGTGCAGCTTCGTTTGCACGGCGGAACGGGGCAAAGCGGTTCGACATTAACAGGGCAACCGGCTTCAAGCCTTGGCGTAAAAATGGCAAGCTGCGCCGAACAAGTAATGTCTTTTCCAATTACTTACGAAATTCATTCGTTCACAAGCCCGGACGAAATTTATTGCGTAATTAACTACAATTCGGATTTTTACCAAGCTGTCGCCTTTGGCATTTCGGACATTCCGGGCATCGGCGGCACTGGCGCATGGTTCACCGGAAACTTGCGAAGTGACGTAAGTTTGACCGGAACCGGCAGCACGTCTAGCGCAACGCGCGTACATATGTCGGCAGGCAAGGACAGTTGCGGCAGTTCTCCGTATTCCGGCATGTGCTGTCCATTTTGGTTTGCACAATCCAACGCAGGTTTTAACTTTACTTCGTATGTTCATACGGGGCTTGATTCTGTCGCATGGCGCGTTGAAGGTTCAGTTACCGCAGGTTCTGGCCTTAGCGGCATTTCGTATGCGGCTGCACTTCTTACAGCGTTGCCGAATTTGTCGAATCAGGCGACCGTTTTAGTTCCAGTTAAGGCAATCGCTTATCGTCTTGACGGCGGACGAACAATTGTTGCAAATCCGAAAAACGTTCGTTATATGCGCCTTGACAACGTAGTTCCGGGGGAAATCGTAACCTTCGGCGCGGATCAATGGAAGTGTTATCCGATGCTGCGCAAAAACGCCACTATTCGAAACGGTCAAACTTGGACGAATGGTCTTGCGGAAACCGGAACTTGGGGTTACGCAATCAAATATACCGGAAGCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
bb005326d3fda569c8cb0dcc7c1f57aee449c6bcb4e531d0bd23b1def3eac704
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6026
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and characterization of new Stenotrophomonas phages Wittmann,J. and Mamat,U. 2014-01-22 — GenBank