Protein

View in Explore
Genbank accession
YP_010064915.1 [GenBank]
Protein name
major tail protein
RBP type
TSP
Evidence RBPdetect
Probability 0,72
Protein sequence
MHLPNGSQIFIGVNMGEPISATQISNADNPVFTTENTQSIKKGAYVLIETSSWGKLVSRVLRVKEVSDNVSVTLEGVSTKDTNVFPEGQNTATFREVKSWVEIPCVQDLAQDGGEQQYYTYQCLADDQEQQLPTYKSAVSLTYTFAHEYDNPIYPILREAEESGDVTALRMYVPKAKEMRCWAGVLSFNDIPQTTMNEMETVSLSVSLKGRFTFLSSDIN
Physico‐chemical
properties
protein length:220 AA
molecular weight: 24560,25070 Da
isoelectric point:4,63297
aromaticity:0,09091
hydropathy:-0,33409

Domains

Domains [InterPro]
DC_0037
ATT
1–50
DC_0037 IPR014918
YP_010064915.1
1 220
Architecture
ATT
TAS
ATT 1-50 | TAS 51-216 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_010064915.1
1 220
Domain Start End Length (AA) Confidence
N-terminal 1 26 26 0,7841
Central domain 27 209 184 0,0499
C-terminal 210 220 10 0,6122
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-26
Central
27-209
C-terminal
210-220

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage tiwna
[NCBI] 		2696449 Uroviricota > Caudoviricetes > Drexlerviridae > Warwickvirus > Warwickvirus tiwna
Host Escherichia coli K-12
[NCBI] 		83333 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Escherichia

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010064915.1 [NCBI]
Genbank nucleotide accession
NC_054896 [NCBI]
CDS location
range 15372 -> 16034
strand +
CDS
ATGCACTTGCCTAATGGTTCTCAAATTTTCATCGGCGTTAACATGGGTGAGCCAATTAGCGCTACTCAAATCAGCAATGCTGATAATCCTGTTTTTACAACCGAAAACACTCAAAGCATCAAAAAAGGCGCTTATGTTCTTATTGAAACATCTTCCTGGGGCAAACTTGTTAGTCGCGTGCTTCGAGTTAAGGAAGTATCAGATAATGTAAGTGTTACTCTTGAAGGTGTTAGCACTAAAGATACAAACGTATTTCCAGAAGGACAGAACACAGCGACTTTCCGAGAGGTTAAATCTTGGGTAGAGATTCCTTGCGTACAGGATCTTGCTCAGGACGGCGGCGAGCAACAGTATTACACTTATCAGTGTTTGGCTGATGACCAGGAGCAGCAGTTACCGACCTACAAGAGCGCAGTTTCTCTTACCTACACTTTCGCGCATGAATATGATAATCCGATTTATCCGATCTTGCGCGAGGCTGAGGAATCCGGCGACGTAACCGCTTTGCGTATGTACGTTCCGAAAGCTAAAGAGATGCGTTGCTGGGCTGGCGTATTGTCTTTTAATGACATTCCGCAAACCACTATGAACGAAATGGAAACTGTTTCCCTTTCCGTATCTCTGAAAGGTCGATTTACGTTCTTATCTTCCGACATCAATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
7557987e07d35db9f5ac242203ceeffbf67220019bc20ac74c95212d9ccc75df
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,9545
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Exploring the Remarkable Diversity of Culturable Escherichia coli Phages in the Danish Wastewater Environment Olsen,N.S., Forero-Junco,L., Kot,W. and Hansen,L.H. 2020 — GenBank