Protein

View in Explore
Genbank accession
QBX23020.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,86
Protein sequence
MAGIDKYLDIIKKGVFGRDVRKAIHDGIAQVYEDATFDGNTNMEVAKARGTFEQLPMRLDSMSDDLANKANQKWVDSQLKNIVSSSPGSVLENFETIQNTYPNGLNKIVIAKDSGKWYYWNNSSNTWVEGGIYQAKMLGSDEVTVDNVDFVKGIKQMLSSKIDDETWIWNGHITVYNATGWSRYMPVHLIKGKTYYIYNVRGYFSHIVSVDGTRRIKQLATSDTLTTIEYTATEDSLLYISTNDTKNATSPKVFNASINELKDAQVDFSNSPNGYATVNIPKLSLDVKAEDISFANIIKQLIDESAFINGLYYTGNKTSTSEQNSWGIYPAIYLKADQTYGLQNVRGYFTYFFDNNDNLIKKFATSDVLISEDYTPTKNGYLLITRRLADPPSKLILGGVAKASLLTSLDYGESALESTIPIIGKNKKNIKFGRDIKNIDKLATITINELGYLSPKKVSHENKGFISKVNVYIKNSGAYTFAVATIDQNNLVVSPRIFTKQLKSGYNELLLRDENIPIYYGEQLFFKNSKDNLVYASVDGETNLIQDAEHMTTNPGYSGKIMYETSYSIPFNYEIEPETTEDKVHNIEAQINKIVPLVKGLEIFKQTPVVTSPNGTKFRLVVDDNGIISAVPSIPKKITFFGNSLLSHGGYYGGVGMAATSQDKDYYHLLTNYIKSKNPNAITNIGKGPNWEGGTSSAERRKMLNTLIRPMIDSDTDIVFIQFGDNVNTAEKRATFIEDGIELVNFIKSNSPKALIYWIGVWYGGKEVADFIKTICDRTNIKFIDITSLATESRFKAKIGQKVALPDGGTYIVDNAGVASHPGDEGMKKIAETIQQHLLF
Physico‐chemical
properties
protein length:840 AA
molecular weight: 93733,87280 Da
isoelectric point:6,33041
aromaticity:0,10476
hydropathy:-0,33310

Domains

Domains [InterPro]
DC_1932
STR
1–500
DC_1932 SSF52266
IPR036514
STR
635–839
IPR036514
cd00229
ENZ
638–834
cd00229
QBX23020.1
1 840
Architecture
STR
STR
STR 1-500 | STR 635-839 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QBX23020.1
1 840
Domain Start End Length (AA) Confidence
N-terminal 1 342 342 0,6920
Central domain 343 559 218 0,3182
C-terminal 560 840 280 0,3755
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-342
Central
343-559
C-terminal
560-840

Taxonomy

  Name Taxonomy ID Lineage
Phage Streptococcus phage Javan110
[NCBI] 		2547981 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Streptococcus constellatus
[NCBI] 		76860 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Lactobacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QBX23020.1 [NCBI]
Genbank nucleotide accession
MK448842.1 [NCBI]
CDS location
range 26924 -> 29446
strand +
CDS
ATGGCAGGAATTGACAAATATTTAGACATCATAAAAAAAGGAGTTTTCGGTCGCGATGTTAGAAAAGCAATTCATGATGGAATAGCACAAGTTTATGAAGATGCAACCTTTGATGGAAACACGAATATGGAGGTTGCAAAAGCGAGAGGTACTTTTGAACAATTACCAATGCGTTTAGATTCAATGAGTGATGATTTAGCTAACAAAGCAAATCAAAAGTGGGTTGATAGTCAGCTCAAAAATATTGTTTCAAGTAGTCCAGGTAGCGTTCTTGAAAATTTTGAAACAATTCAAAACACTTATCCTAACGGTTTAAATAAGATTGTCATTGCTAAGGATAGTGGTAAATGGTATTACTGGAATAATTCAAGTAATACTTGGGTAGAAGGAGGCATATATCAAGCAAAAATGCTTGGTAGTGATGAAGTAACGGTAGATAATGTTGACTTTGTCAAAGGGATTAAACAAATGCTCTCCTCTAAAATAGATGACGAAACATGGATTTGGAATGGTCATATTACTGTTTATAATGCGACAGGCTGGTCGCGTTACATGCCTGTTCATTTGATTAAGGGTAAGACATATTATATCTACAATGTTCGTGGTTATTTCAGTCATATTGTTTCTGTGGACGGAACTAGACGCATCAAGCAGTTGGCAACAAGTGATACTTTGACGACAATTGAATATACGGCAACAGAGGATAGTTTGTTATATATATCTACTAATGATACGAAGAATGCAACATCACCAAAAGTTTTCAACGCTTCAATTAATGAATTGAAGGATGCACAGGTTGATTTTTCTAACTCGCCAAATGGGTATGCGACAGTCAATATTCCAAAATTGTCTTTGGATGTCAAAGCTGAAGATATTAGTTTTGCAAATATCATCAAACAATTGATAGATGAAAGTGCGTTTATTAACGGATTATATTACACAGGAAATAAAACAAGCACTAGCGAACAGAATTCATGGGGAATTTATCCTGCTATTTATTTAAAAGCTGATCAAACTTATGGTCTACAGAATGTACGTGGATATTTTACATATTTCTTTGATAATAATGACAATTTGATTAAAAAATTCGCAACATCGGACGTTTTGATTTCTGAGGATTACACTCCAACAAAAAATGGGTATCTATTAATTACAAGAAGGTTGGCCGATCCTCCATCAAAATTGATTTTAGGAGGAGTGGCTAAAGCTAGTCTTTTAACTAGTCTAGATTATGGTGAGTCTGCGTTAGAAAGTACTATACCAATTATTGGAAAAAATAAGAAAAATATAAAGTTTGGACGTGATATAAAAAATATCGACAAATTAGCAACAATTACAATAAACGAATTGGGTTATCTTTCTCCTAAAAAAGTATCGCATGAAAACAAGGGATTTATCTCAAAGGTTAATGTATATATCAAAAATTCCGGTGCTTATACATTTGCAGTCGCTACTATTGACCAGAACAATTTAGTAGTGTCCCCTAGAATATTCACAAAACAATTAAAATCTGGCTATAACGAATTGCTTTTAAGAGACGAAAATATTCCCATTTATTATGGTGAACAACTTTTCTTTAAAAATTCTAAGGATAATCTAGTTTATGCTTCTGTTGATGGAGAAACAAATCTTATTCAAGATGCAGAACATATGACGACAAATCCTGGTTATTCCGGAAAAATTATGTATGAAACCAGTTATTCTATTCCGTTTAATTATGAAATTGAACCTGAAACAACCGAAGACAAAGTCCATAATATAGAAGCTCAAATCAATAAAATTGTTCCACTCGTAAAAGGATTAGAGATATTTAAGCAGACACCTGTTGTAACAAGCCCAAACGGTACAAAATTTAGACTTGTTGTTGATGATAATGGTATTATCAGTGCCGTTCCATCAATTCCTAAAAAAATTACATTTTTTGGGAACTCTCTTCTTTCTCATGGTGGCTATTATGGTGGTGTTGGAATGGCGGCGACATCACAGGATAAAGACTATTATCATTTATTAACAAATTATATTAAGTCAAAAAATCCCAATGCAATAACGAATATTGGAAAAGGTCCTAATTGGGAAGGAGGAACATCTAGCGCAGAACGAAGAAAAATGTTGAACACATTGATACGTCCGATGATAGATTCAGACACTGATATTGTTTTTATTCAATTTGGAGATAATGTGAATACTGCAGAAAAACGAGCTACTTTTATCGAGGATGGTATTGAGCTTGTTAATTTTATTAAATCTAACAGTCCAAAAGCTCTTATTTATTGGATCGGCGTATGGTATGGTGGTAAAGAAGTCGCTGATTTTATCAAAACAATATGTGATAGAACGAATATTAAATTTATTGACATCACATCATTAGCAACAGAATCAAGATTTAAAGCTAAAATAGGGCAAAAGGTTGCTCTTCCTGATGGAGGAACATATATTGTTGATAATGCTGGTGTCGCAAGCCATCCAGGTGATGAAGGAATGAAAAAGATTGCTGAAACGATTCAGCAACATTTATTATTTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
e1021bfc8364eb599b7917dac86b24be6a613c248fca038d890fec40e6bce696
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3272
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Prophages and satellite prophages are widespread among Streptococcus species and may play a role in pneumococcal pathogenesis Rezaei Javan,R., Ramos-Sevillano,E., Akter,A., Brown,J. and Brueggemann,A.B. 2018-12-20 — GenBank