Protein

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Genbank accession
SOO46371.1 [GenBank]
Protein name
Phage tail fibers
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,89
TF
Evidence RBPdetect2
Probability 0,89
Protein sequence
MALNIRTVMTYPLDGSNVNFTITFEYLARKFITVTLIGTDRKELILNQDYRFTSKNQITLTKAWGPSDGYANIEIRRFTSATERLVDFADGSILRAYDLNISQVQTLHVAEEARDLTADTIGVNNDGNLDARGRRIVNLADGVDVGDAVTVRQQQNWADSALNQANRSKQEADRSEAAANRSSASASAALASEQKAKTSENNAQVSETNAKTSETNAKTSENLASASSSSAKVSETNSKTSETNSKASEERAILEAGKLGNMNDFAATIKTVTGNDVVMKGKFSVDNGLQSNAGITYLNVNTATITALRTQGDIEVFPPIGGQPNGEGGQMRLKGADGGNTGGFIDVDSVGTLRIVKEGSGAGLKVSFDTAGNMLVHSNFYALTGGVKLNSSGTVVLGPDGNIESSIYKDGNIYADLNKRILQGENRRLVATDIWSGDLTGAGPWNIGPVGNMVGGTLGIKVNKDGEDLWLVLSMSPFDDMKYTLAGRGNLSVDIRIWGGTQIEVTRVTNCDVRQLQLWK
Physico‐chemical
properties
protein length:520 AA
molecular weight: 55631,22920 Da
isoelectric point:5,26559
aromaticity:0,05769
hydropathy:-0,35885

Domains

Domains [InterPro]
IPR005604
ATT
1–131
IPR005604 Coil
DC_0657
STR
1–513
DC_0657
SOO46371.1
1 520
Architecture
ATT
STR
ATT 1-131 | STR 132-513 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
SOO46371.1
1 520
Domain Start End Length (AA) Confidence
N-terminal 1 266 266 0,9322
Central domain 267 465 200 0,4028
C-terminal 466 520 54 0,9923
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-266
Central
267-465
C-terminal
466-520

Taxonomy

  Name Taxonomy ID Lineage
Phage Yersinia phage fPS-52
[NCBI] 		2052751 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
SOO46371.1 [NCBI]
Genbank nucleotide accession
LT961837.1 [NCBI]
CDS location
range 32511 -> 34073
strand +
CDS
ATGGCTCTAAATATTCGTACCGTAATGACTTACCCACTGGATGGCTCAAACGTGAACTTTACGATTACCTTTGAGTATCTGGCACGTAAGTTCATTACTGTTACCCTTATTGGTACTGACCGTAAAGAGTTAATTCTCAATCAGGACTATCGGTTCACCTCTAAGAATCAAATCACTCTGACTAAGGCATGGGGTCCAAGTGATGGCTATGCTAATATAGAGATTCGACGATTCACCTCAGCCACCGAGCGTCTTGTTGATTTTGCTGATGGTTCAATCCTACGAGCTTACGATTTGAACATATCGCAGGTTCAAACACTACATGTTGCAGAAGAGGCGCGCGACTTAACTGCTGATACTATCGGCGTTAATAACGATGGTAACTTGGATGCACGTGGTCGACGGATTGTTAACTTGGCTGATGGTGTAGACGTTGGGGATGCTGTCACAGTTCGACAACAGCAAAATTGGGCTGACTCTGCATTGAACCAAGCGAACCGCTCTAAGCAAGAAGCTGACAGGTCGGAGGCTGCTGCAAATCGTAGTAGTGCGTCTGCGTCTGCTGCGCTTGCGTCTGAACAGAAAGCTAAAACCAGTGAGAACAACGCTCAGGTATCTGAGACCAACGCTAAGACCTCTGAGACCAACGCTAAGACCTCTGAGAACTTAGCCAGTGCTTCTTCTTCTTCTGCTAAGGTATCTGAGACCAACTCTAAGACCTCTGAGACAAACTCTAAGGCAAGTGAAGAACGTGCTATTCTTGAGGCGGGCAAGCTCGGTAACATGAATGACTTTGCTGCCACCATAAAGACTGTTACCGGAAATGACGTTGTGATGAAAGGTAAGTTCTCTGTTGATAATGGTTTACAGTCTAATGCTGGTATTACGTACCTTAACGTGAATACTGCAACCATCACGGCCCTTAGAACTCAAGGTGATATCGAAGTGTTCCCTCCCATTGGTGGACAACCAAACGGAGAAGGCGGCCAGATGCGACTTAAGGGTGCTGATGGTGGAAACACTGGCGGTTTTATTGATGTGGATTCGGTAGGAACACTTAGAATTGTTAAAGAGGGTTCTGGGGCTGGATTGAAGGTGTCTTTTGATACCGCTGGTAATATGCTTGTTCATAGTAACTTCTATGCTTTAACGGGTGGCGTGAAGCTAAATTCATCTGGAACGGTTGTTCTTGGCCCTGATGGTAATATAGAAAGCTCTATTTATAAAGATGGAAATATCTATGCCGACTTAAACAAGAGGATACTACAAGGAGAGAACCGTAGATTGGTAGCAACTGATATATGGTCTGGGGATTTAACCGGTGCTGGCCCTTGGAATATTGGCCCTGTAGGTAATATGGTTGGCGGCACTCTTGGGATTAAGGTTAATAAGGATGGTGAGGATTTGTGGTTAGTACTATCAATGTCACCTTTCGATGATATGAAGTATACTCTTGCTGGGAGAGGTAACCTATCAGTTGATATCCGTATCTGGGGAGGGACTCAGATTGAAGTAACAAGGGTGACTAACTGTGATGTTCGGCAACTTCAACTTTGGAAGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
42b7940564c3a76c8aad97e622d31ef2672faef474ee997e61e217dbce5ad95c
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7257
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50