Protein

Genbank accession
AFV51092.1 [GenBank]
Protein name
lower collar protein [Vibrio phage VPMS1]
RBP type
TF
Evidence RBPdetect2
Probability 1,00
Protein sequence
MPMYQVPSSASETKVESRNETLAYHAIAVAPKEGTATAGTVTVSARAPGSDVFEAIPDGAIDLSAPETVLFTFPVAEYKVVVSGFAGTATTLLLQDTVAEA
Physico‐chemical
properties
protein length:101 AA
molecular weight: 10404,56640 Da
isoelectric point:4,33638
aromaticity:0,06931
hydropathy:0,23366

Domains

Domains [InterPro]

No domain annotations available.

Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage VPMS1
[NCBI] 		1233488 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AFV51092.1 [NCBI]
Genbank nucleotide accession
JX880072.1 [NCBI]
CDS location
range 7477 -> 7782
strand +
CDS
ATGCCAATGTACCAAGTACCGTCTTCGGCTAGCGAGACTAAGGTTGAAAGTCGTAATGAAACACTAGCCTACCACGCTATAGCTGTAGCACCTAAAGAAGGCACAGCCACAGCTGGCACCGTTACGGTGTCTGCACGTGCGCCTGGCAGCGACGTGTTCGAAGCTATACCTGATGGTGCTATCGATTTGTCGGCACCTGAGACTGTGCTATTTACTTTCCCTGTAGCGGAGTACAAGGTAGTAGTATCGGGCTTTGCCGGTACAGCTACTACTCTGTTGCTACAAGACACAGTTGCGGAGGCTTAA

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

No tertiary structures available.

Literature

No literature entries available.