Protein

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Genbank accession
AXF41305.1 [GenBank]
Protein name
unknown
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MKKFIPIIMLLTFGTAANAGGLSTRHQSSLQLTVEPQIVTQTRIGNSYSISGNNVITTHTPANGSAVDGGIGINTYSATTGVGTVGTITGVQNGCTGSSADDDLACAGSFSFAQSWQQGDNSSAAAASWGDITTQSAGTAGTGAPGTITNGHTITINQGTSSAGTLGAGNSLTGQFVSEITIFD
Physico‐chemical
properties
protein length:184 AA
molecular weight: 18281,76580 Da
isoelectric point:4,76114
aromaticity:0,05435
hydropathy:0,01359

Domains

Domains [InterPro]
IPR046285
STR
9–175
IPR046285
IPR046285
STR
20–175
IPR046285
AXF41305.1
1 184
Architecture
STR
STR 9-175 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AXF41305.1
1 184
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,0006
Central domain 11 173 164 0,0115
C-terminal 174 184 10 0,9905
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-173
C-terminal
174-184

Taxonomy

  Name Taxonomy ID Lineage
Phage Cyanophage S-TIM4
[NCBI] 		1048189 Uroviricota > Caudoviricetes > Pantevenvirales > Thaumasvirus > Thaumasvirus stim4
Host Synechococcus sp.
[NCBI] 		1131 cellular organisms > Bacteria > Bacillati > Cyanobacteriota/Melainabacteria group > Cyanobacteriota > Cyanophyceae

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AXF41305.1 [NCBI]
Genbank nucleotide accession
MH512890 [NCBI]
CDS location
range 141716 -> 142270
strand -
CDS
ATGAAGAAATTTATTCCTATCATTATGCTTTTGACGTTCGGCACAGCAGCAAATGCGGGCGGACTATCGACTAGACACCAATCTAGTTTACAACTAACTGTTGAACCTCAAATCGTGACTCAGACACGAATTGGCAATAGCTATTCGATCTCTGGAAATAACGTGATCACAACACATACACCTGCCAATGGTAGTGCTGTAGATGGTGGTATCGGTATTAACACTTATAGTGCTACTACAGGTGTTGGAACAGTTGGAACAATTACTGGTGTTCAAAATGGATGCACAGGATCATCTGCAGATGATGACCTAGCATGTGCAGGATCATTCTCCTTCGCCCAATCATGGCAACAAGGTGACAATTCTTCTGCTGCAGCTGCTAGTTGGGGTGATATCACCACACAAAGTGCAGGAACAGCAGGAACAGGTGCACCAGGAACAATCACAAATGGTCATACTATTACGATTAATCAGGGCACAAGTTCAGCAGGAACTCTCGGTGCAGGTAATTCATTGACAGGTCAGTTTGTTAGCGAAATTACTATTTTTGACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
bc06ce8f74a9809cc4794e4d5dbde9a381ff71c362234c228c4a1c95d63c7bf2
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,3692
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50