Protein

Genbank accession
AFR52272.1 [GenBank]
Protein name
integrase core domain protein [Pseudomonas phage JBD67]
RBP type
TF
Evidence RBPdetect2
Probability 1,00
Protein sequence
MSAVITQALVDLERALRAAPRGQRVEIAQSTAQRLDMSLATLYRKLREVTADSKPRKRRSDAGTSALSREDALTISSALMESARRNEKRLYSLEDAVEALRASKMIRADVIDEDTGEIRPLSISAISRALYSFGVHPQQLLQPAPVSELRSRHPNHVWQIDASLCVLYYLKPGADEHGNGLRVMEHDQFYKNKPKNVARIASNRVWSYEITEHASDWIYVKYVMGAESGENLCDVLIDAMQERGGNDILHGVPQILMMDPGSANTSAMARNLCRALRIRVIVHKPGAARVTGQVENARNLIERKFEAGLRFQPVADLDELNAAAKTWRAWFNAAKKHSRHGMTRSEAWMRIREHQLVKAPSVEVCRQLAIAEPESRKVTNKLRVSFQGTEYDVSVVPGVMIGEKLMITRNPWQSDAAQAITFDQDGHEVFHVIPRIEKDKFGFYVRAPMIGEEFRPHAETPAQKARKEAARLAMGANSDAEEQAARKAKAIPFGGRLKPYQHIEDAQLPTFMPRKGSELQLDVTLPTVESKPLSHPAAAKILRARLDGVWSPESMLWLKSNYPDGVLEDQLDSIVEQLQAAPSRPALRVVGGNS
Physico‐chemical
properties
protein length:594 AA
molecular weight: 66399,07290 Da
isoelectric point:9,17090
aromaticity:0,05892
hydropathy:-0,42677

Domains

Domains [InterPro]

No domain annotations available.

Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage JBD67
[NCBI] 		1225793 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AFR52272.1 [NCBI]
Genbank nucleotide accession
JX495043.1 [NCBI]
CDS location
range 5214 -> 6998
strand -
CDS
ATGAGCGCCGTCATTACTCAAGCCCTGGTCGATCTGGAGCGCGCCCTTCGCGCCGCCCCACGCGGGCAGCGCGTAGAGATTGCCCAGTCGACGGCCCAGCGGCTCGACATGTCACTCGCCACGCTTTACCGCAAGCTGAGGGAGGTCACCGCAGACAGCAAGCCCCGCAAACGCCGGAGTGACGCCGGCACCAGTGCCCTGAGCCGGGAAGATGCCCTGACCATCAGTAGCGCGCTGATGGAGAGTGCCCGCCGCAACGAAAAGCGCCTGTATAGCCTGGAGGATGCGGTGGAAGCGCTACGGGCCAGCAAGATGATCCGGGCGGACGTCATTGACGAGGACACGGGCGAGATCCGGCCGCTGTCCATCAGCGCGATATCCAGGGCTCTCTACAGCTTCGGGGTTCATCCCCAGCAATTGCTCCAGCCGGCTCCGGTGAGCGAGTTGAGAAGCCGTCACCCGAACCACGTTTGGCAGATCGATGCCTCTCTGTGTGTTCTTTATTACCTCAAGCCCGGCGCCGATGAGCACGGTAACGGCCTGCGCGTCATGGAGCATGACCAGTTCTACAAGAACAAGCCGAAGAACGTGGCCCGCATCGCCTCTAACCGGGTCTGGTCGTACGAGATCACCGAGCACGCCAGCGATTGGATCTACGTGAAGTACGTCATGGGCGCCGAGAGCGGCGAGAACCTGTGTGATGTGCTGATCGACGCCATGCAGGAGCGCGGTGGCAACGACATTCTGCATGGCGTGCCGCAGATTCTGATGATGGACCCAGGTTCTGCCAACACCTCGGCCATGGCCCGGAACCTTTGCCGTGCGCTGCGCATCCGCGTCATCGTCCACAAGCCCGGTGCCGCGCGGGTGACCGGCCAAGTGGAGAACGCCCGGAACCTCATCGAGCGCAAGTTCGAAGCGGGACTGCGCTTCCAGCCTGTCGCCGACCTGGACGAACTGAACGCTGCCGCCAAGACCTGGCGCGCGTGGTTCAACGCCGCGAAGAAACATTCCCGCCATGGCATGACCCGCTCGGAGGCCTGGATGCGCATCCGTGAGCACCAGTTGGTGAAGGCGCCCAGCGTCGAAGTATGCCGCCAACTGGCAATCGCCGAGCCGGAGAGCCGCAAGGTCACTAACAAGCTGCGCGTCAGCTTCCAGGGAACCGAATACGACGTCTCGGTCGTACCTGGCGTGATGATCGGCGAGAAGCTGATGATCACCCGCAACCCCTGGCAGAGCGATGCCGCCCAGGCGATCACTTTCGACCAGGACGGCCATGAAGTCTTCCACGTCATTCCGAGGATCGAGAAGGACAAGTTCGGCTTCTACGTGCGCGCCCCCATGATCGGCGAGGAGTTCCGGCCGCATGCGGAGACGCCTGCACAGAAGGCTCGCAAGGAAGCGGCCCGCCTAGCCATGGGCGCCAATAGCGATGCCGAAGAGCAGGCTGCACGCAAGGCCAAGGCCATTCCGTTCGGCGGGAGGCTGAAGCCCTACCAGCATATCGAAGACGCTCAGTTGCCGACCTTTATGCCACGCAAGGGCAGCGAGCTGCAGCTCGACGTGACGCTGCCCACCGTCGAGAGCAAGCCACTGAGTCACCCGGCAGCCGCCAAGATCCTCCGGGCGCGGCTGGATGGCGTCTGGAGTCCCGAGTCGATGCTCTGGCTCAAGTCCAACTACCCCGACGGAGTGCTGGAGGACCAGCTCGACAGCATCGTCGAGCAGTTGCAGGCGGCGCCCAGCCGGCCCGCGCTGCGCGTTGTGGGAGGTAACTCGTAA

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

No tertiary structures available.

Literature

No literature entries available.