Protein

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Genbank accession
XPT11114.1 [GenBank]
Protein name
virion structural protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MALERQEVKNPTGIVTDIAPADLPLDKWSFGNNVRFKNGKAQKALGHSPIFDTAQAPILDMFPFIRNNIPYWLLCSEKRLYLADGTTIIDVSPGPYSASVTNRWSVGSFNGVIFANDGVNPPHHLPPTESVFRVLPNFPANTTFRRLKSFKNFLIGLNVTSNSIEMPQMVWWSTSADAGGVPASWDPTDPTKDAGQNTLADTNGAIVDGVKLRDSFIIYKEDSVYSMRYIGGLYIFQFQQLFNDVGILGPNCAIEFDGNHFVVGHGDVYVHNGVQKQSVIDAQVRKFFFSDINPDNYQRTFVLADHVNTEMWVCYSSTRSEPGKHCDRAIIWNWKENTWSIRDLPNVLSGAYGIIDPKTSNLWDDDSNPWDTDTSVWGEGSYNPAKSSMIFTSFQDAKLFLFGETSTFSGQSFTSTLERSDIYLGDDRMMKTVSAVIPHITGNGVCNIWVGNAQVQGSGIRWKGPYPYRIGQDYKIDTKHVGRYIALKFDFASADDWYFNGYTLEMAPKAGMR
Physico‐chemical
properties
protein length:513 AA
molecular weight: 57486,92840 Da
isoelectric point:5,60503
aromaticity:0,12865
hydropathy:-0,30916

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XPT11114.1
1 513
Domain Start End Length (AA) Confidence
N-terminal 1 374 374 0,7610
Central domain 375 502 129 0,0876
C-terminal 503 513 10 0,9953
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-374
Central
375-502
C-terminal
503-513

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage WRAIR_EPa87
[NCBI] 		3406649 No lineage information
Host Pseudomonas aeruginosa
[NCBI] 		287 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XPT11114.1 [NCBI]
Genbank nucleotide accession
PV036883 [NCBI]
CDS location
range 9749 -> 11290
strand +
CDS
ATGGCCCTAGAGAGACAAGAGGTCAAGAACCCAACGGGGATCGTGACTGATATTGCACCCGCTGACCTGCCCCTGGATAAATGGTCCTTCGGGAACAACGTCCGGTTTAAGAACGGTAAGGCTCAGAAGGCTCTGGGCCATTCCCCCATCTTTGATACTGCCCAGGCCCCTATCTTGGATATGTTCCCCTTCATTCGGAACAACATCCCATACTGGCTCCTGTGCTCAGAAAAGAGGCTTTACCTGGCAGATGGGACTACCATCATTGATGTGTCCCCAGGTCCATACTCTGCGAGTGTAACCAACCGGTGGTCTGTAGGTTCCTTCAACGGAGTCATCTTTGCTAACGATGGGGTTAACCCTCCCCATCACCTACCACCAACTGAGAGTGTGTTTAGGGTTCTACCTAACTTCCCAGCGAATACAACCTTTAGGCGTCTTAAGTCCTTCAAGAACTTCTTGATTGGATTGAATGTAACGTCTAACTCTATTGAAATGCCCCAGATGGTCTGGTGGAGTACCTCAGCTGATGCTGGAGGTGTCCCGGCCTCTTGGGACCCAACAGATCCTACTAAGGATGCTGGACAGAACACCTTGGCCGATACCAATGGTGCTATCGTGGATGGTGTGAAGCTTCGTGACTCCTTCATCATCTACAAGGAAGACTCTGTATATTCCATGCGATATATCGGTGGTCTGTACATCTTCCAATTCCAGCAACTGTTTAATGACGTAGGTATCCTTGGTCCTAACTGCGCTATAGAGTTCGATGGTAACCACTTTGTTGTAGGTCATGGTGACGTCTATGTCCACAACGGTGTACAGAAGCAATCCGTGATTGATGCTCAGGTCCGTAAGTTCTTCTTCTCGGATATCAACCCGGATAACTACCAACGGACCTTTGTGCTAGCTGACCATGTGAACACTGAAATGTGGGTATGCTACTCCTCGACTCGATCTGAGCCTGGGAAGCATTGCGATAGGGCTATCATCTGGAACTGGAAGGAGAACACTTGGAGTATCCGAGACCTCCCTAACGTCCTCAGTGGAGCCTATGGCATCATTGACCCTAAGACTTCTAACCTCTGGGATGACGACTCCAACCCCTGGGATACCGATACGTCGGTCTGGGGTGAAGGTTCGTATAACCCAGCGAAGTCTAGTATGATCTTCACGTCCTTCCAGGATGCTAAGCTCTTCCTCTTCGGGGAGACTTCTACGTTCTCTGGACAATCATTCACGAGTACCCTTGAGAGATCCGATATCTACCTTGGGGATGACCGAATGATGAAGACTGTCAGTGCTGTTATACCTCACATCACAGGCAACGGGGTATGTAATATTTGGGTAGGTAATGCCCAGGTACAAGGCTCAGGTATCCGATGGAAAGGGCCTTACCCGTACCGTATTGGGCAGGACTATAAGATTGACACCAAGCATGTGGGCCGATACATTGCCTTGAAGTTTGACTTCGCCTCAGCAGATGATTGGTACTTCAATGGATATACTTTGGAAATGGCCCCGAAGGCAGGTATGCGATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
c1d9ab3cb6b476a877a7ab96b6a087911ac3c6ec44909d2543bc13bbf5ea51d9
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8943
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genome Sequences of Two Phages Active against Cystic Fibrosis Isolates of Pseudomonas aeruginosa Peters,T.L., He,Y., Ward,A.M., Mzhavia,N., Ellison,D.W., Nikolich,M.P. and Filippov,A.A. — — GenBank