Protein

View in Explore
Genbank accession
QIG64760.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,89
Protein sequence
MSDIEQRNSAVPILGTNISDPIVPGTTADNYPTHYAKYGKGGFVSVQTFDERNNIPEERKEEGMLCFVIQDPDKIFLYQWLNGEWVKPTFSSGGGGDGKVVVLETPEELNQKPELQQEGQIVYIKSTDELLFWSNINAWISVDHIRIQEEEPTDKNVLWVNPSEKSLPQYKNEDIQALIEAVSALQKTVNKHEYAFSQEMVCGGFTNSAREAMMAAATPENPKEPETTSLENALATASEEEYPEYAEYEIPNVKHISIKAGLSADLVPNRRNFIDNELLWCTDTKILYIMSEGQLVKVSGGSGGGGTEWDPSVLDELDYIGFVAPSGTTYRVKVDNEGKLVVYNKNLDTPQTEPTGGQTDPSGWVYVTSLFLQKLYINSIYCGGLTANEHSYNYCSHHFVELSNLTTEDINLNGLSLQYSSEGTQWQVLPLWGIIKAQSTFLIRGAQCSVMDANTTRIKVETYDMEWKGSDGNLIKFDNNKAKFYLTWGTTPSAVKNPYSNADGNYRVSKGYIDLVGFNKENAESADTIDASENKPYTYLSNTKLFTKYYDMDPVSQATKSLDKRNNANDWYFVDLTKNLIPSVEAYTPKASFQNKNIFFNKSKFENNTPNLISCTFGLQATAPNATRCFNWVSVGYYDEFIWYRKKNAQDWIKLESFKNETGIRKYYNRIRMEATDKTPFTTHKIIIKNLDAGTYEYKVGRANSDGNPSEYISSIYEFTVRNTSDISDNFTFVQVSDQQGFNWDEYQVWKTAANYIKTNVPECQFTINTGDMTQNGNRVNEWIDYYNSRKSLWGVEEMVTIGNNDLCPADMYVLGNGGDSSKINPSNMSFFYTFELDEDNPPVFTIENKEVYIDSLYSFNYGNVHFMCVNSEITEMTETNIYGLSTGKITYPYIKQWCQNDITKNNSAVWQVAFCHEMPFTIITQNVIQQFYWNDTENDKVERSGSHLNYNVPNSDKYWFSKFCQDNNIRLVLGGHKHTYSVSWPLKENFTQSGAPISMKPIIQVTQSDLTTYFNSDSLYEETEGSLAGQKFPSAWRTDDNYKQRKHLCTFELVEKITAPVYAMCQATGYKHTSNKELPAPEIPWLRHYFPATIKVVDQTTITATVNAGQRYPFYIIWNVTPTRITGTVKKINYVFTSAGKFNINIQSSVNPPEAIGGNGEENNGNDLILIDK
Physico‐chemical
properties
protein length:1174 AA
molecular weight: 133358,06240 Da
isoelectric point:4,93865
aromaticity:0,12266
hydropathy:-0,54710

Domains

Domains [InterPro]
DC_1430
STR
51–728
DC_1430 IPR029052 DC_0825
IPR036415
Unmapped
367–472
IPR036415 IPR029052
IPR004843
ENZ
732–981
IPR004843
QIG64760.1
1 1174
Architecture
STR
RBD
STR 51-1024 | RBD 1025-1171 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QIG64760.1
1 1174
Domain Start End Length (AA) Confidence
N-terminal 1 368 368 0,9892
Central domain 369 567 200 0,5554
C-terminal 568 1174 606 0,2559
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-368
Central
369-567
C-terminal
568-1174

Taxonomy

  Name Taxonomy ID Lineage
Phage Bacteroides phage SJC03
[NCBI] 		2710505 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Bacteroides thetaiotaomicron
[NCBI] 		818 cellular organisms > Bacteria > Pseudomonadati > FCB group > Bacteroidota/Chlorobiota group > Bacteroidota

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QIG64760.1 [NCBI]
Genbank nucleotide accession
MT074146 [NCBI]
CDS location
range 28301 -> 31825
strand +
CDS
ATGAGTGATATAGAGCAAAGAAATAGTGCTGTTCCAATTTTAGGAACAAATATCTCTGACCCTATTGTTCCAGGTACCACTGCAGATAATTATCCTACTCATTATGCAAAATATGGTAAGGGTGGATTTGTTAGTGTACAAACTTTTGATGAAAGAAATAATATACCTGAAGAAAGAAAAGAAGAAGGTATGTTGTGTTTTGTTATACAAGACCCAGATAAAATATTTCTTTATCAATGGTTAAATGGAGAATGGGTAAAACCTACATTTAGTAGTGGAGGAGGTGGAGATGGTAAGGTTGTTGTTTTAGAAACACCTGAAGAATTAAATCAGAAACCAGAACTTCAACAAGAAGGTCAAATTGTATATATAAAAAGTACAGATGAACTTTTATTTTGGTCAAATATTAATGCTTGGATTTCTGTAGACCATATTAGAATACAAGAAGAAGAACCTACAGATAAAAATGTACTTTGGGTTAATCCAAGTGAAAAATCTTTACCACAATATAAAAATGAAGATATTCAAGCTTTAATTGAAGCTGTTTCTGCTTTACAAAAAACAGTAAATAAACATGAATATGCATTTAGTCAAGAAATGGTTTGTGGTGGATTTACAAATAGTGCTAGAGAAGCAATGATGGCTGCAGCTACTCCAGAAAATCCAAAAGAACCAGAAACTACTTCTTTAGAAAATGCTTTAGCAACTGCTTCAGAAGAAGAATACCCTGAGTATGCAGAATATGAAATACCAAATGTTAAACATATTTCTATTAAAGCTGGTTTATCTGCAGACTTAGTTCCAAATAGAAGAAATTTTATAGATAATGAATTATTATGGTGTACAGATACTAAAATTTTATATATTATGAGTGAAGGACAATTAGTTAAAGTAAGTGGTGGTTCTGGTGGTGGAGGAACAGAATGGGATCCTTCTGTACTTGATGAACTAGATTATATTGGATTTGTTGCACCAAGTGGTACAACTTATAGAGTAAAGGTAGATAATGAAGGTAAATTAGTAGTTTACAATAAAAATCTTGATACTCCTCAAACTGAACCTACAGGTGGTCAAACAGACCCTAGTGGATGGGTATATGTTACATCTTTGTTTTTACAAAAATTATATATAAATTCTATTTATTGTGGAGGATTAACAGCAAATGAACATAGTTATAACTATTGTTCACATCATTTTGTAGAATTATCTAATTTAACTACAGAAGATATTAATTTAAATGGTTTATCTTTACAATATTCAAGTGAAGGTACACAATGGCAAGTATTACCATTATGGGGTATTATAAAAGCACAATCTACATTCTTAATTAGAGGTGCTCAATGTTCTGTAATGGATGCTAATACTACTCGTATCAAAGTAGAAACTTATGATATGGAGTGGAAAGGTTCAGATGGTAATCTTATTAAATTTGATAATAACAAAGCTAAATTTTATCTTACTTGGGGTACTACTCCTTCTGCAGTAAAAAATCCTTATTCCAATGCAGATGGTAATTATAGAGTATCAAAAGGATATATTGATTTAGTTGGATTTAATAAAGAAAATGCTGAATCTGCAGATACTATTGATGCAAGTGAAAACAAACCATATACATATTTAAGTAATACTAAGTTATTTACTAAATATTATGATATGGACCCTGTTAGTCAAGCAACAAAATCACTAGATAAAAGAAATAATGCTAATGATTGGTATTTTGTTGATTTAACTAAAAATTTAATTCCAAGTGTAGAAGCTTATACTCCTAAAGCATCATTCCAAAATAAAAATATATTTTTTAATAAATCTAAATTTGAAAATAATACTCCAAATTTAATTTCATGTACTTTTGGACTTCAAGCAACAGCTCCAAATGCAACAAGATGTTTTAATTGGGTATCTGTTGGATATTATGATGAATTTATTTGGTATAGAAAGAAAAATGCACAAGATTGGATTAAACTTGAATCATTTAAAAATGAAACAGGTATAAGAAAATATTATAATAGAATTAGAATGGAAGCTACAGATAAAACTCCATTCACAACTCATAAAATTATAATAAAAAATTTAGATGCAGGTACTTATGAATATAAGGTAGGTAGAGCAAATTCTGATGGAAATCCTTCTGAATATATAAGTTCTATTTATGAATTTACTGTAAGAAATACAAGTGATATTTCTGATAATTTCACTTTTGTACAAGTTAGTGACCAGCAAGGTTTTAATTGGGATGAATATCAAGTTTGGAAAACTGCTGCTAATTACATAAAAACTAATGTTCCAGAATGTCAATTCACTATAAATACAGGTGATATGACACAAAACGGAAATAGAGTTAATGAATGGATTGATTACTATAATAGTAGAAAATCTTTGTGGGGAGTTGAGGAAATGGTTACTATTGGTAATAATGACCTTTGTCCTGCAGATATGTATGTATTAGGAAATGGTGGAGATAGTTCTAAAATCAATCCTTCTAATATGTCATTTTTCTATACATTTGAATTAGATGAAGATAATCCTCCTGTATTTACTATTGAAAATAAAGAAGTTTATATAGATTCTTTATATTCATTTAATTATGGTAATGTTCATTTTATGTGTGTTAATTCTGAAATAACAGAAATGACAGAAACTAATATTTATGGTTTAAGTACAGGTAAAATAACATATCCATATATTAAACAATGGTGTCAAAATGATATAACTAAAAATAATTCTGCTGTTTGGCAGGTTGCTTTTTGTCATGAAATGCCATTTACTATTATTACTCAAAATGTTATTCAACAGTTCTATTGGAATGATACAGAAAATGATAAAGTAGAAAGAAGTGGTAGTCATTTAAATTATAATGTACCTAACTCTGATAAATATTGGTTTAGTAAATTCTGTCAAGATAATAATATTAGATTAGTATTAGGAGGACATAAACATACATATAGTGTTAGCTGGCCTTTAAAGGAAAACTTTACCCAAAGTGGAGCACCTATTAGTATGAAACCAATAATTCAAGTTACTCAATCTGATTTAACAACTTACTTTAATAGTGATAGTTTGTATGAAGAAACAGAAGGAAGTTTAGCAGGTCAAAAATTCCCTTCTGCTTGGAGAACAGATGATAATTATAAACAAAGAAAACATTTATGTACATTTGAGTTAGTTGAAAAAATAACTGCTCCTGTATATGCTATGTGTCAAGCAACAGGTTATAAACATACATCTAATAAAGAATTACCTGCTCCAGAAATACCTTGGTTAAGGCATTATTTTCCTGCAACAATAAAAGTAGTAGACCAAACAACTATTACAGCTACAGTTAATGCAGGACAAAGGTATCCATTTTATATTATTTGGAATGTTACCCCTACAAGAATAACTGGTACAGTTAAGAAAATAAATTATGTATTTACATCTGCAGGTAAATTTAATATAAATATCCAAAGTAGTGTTAATCCTCCAGAAGCCATTGGTGGAAATGGAGAAGAAAATAATGGTAATGATTTGATTCTTATAGACAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
08b75c79bf58a7a01a85ed1b3e1fd18dae29b118d1ed6ba8c331039d4db2c304
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2855
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Bacteroides thetaiotaomicron-infecting bacteriophage isolates inform sequence-based host range predictions Hryckowian,A.J., Merrill,B.D., Porter,N.T., Van Treuren,W., Nelson,E.J., Garlena,R.A., Russell,D.A., Martens,E.C. and Sonnenburg,J.L. 2020 — GenBank