Protein

View in Explore
Genbank accession
BBF66868.1 [GenBank]
Protein name
K56dep
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoCatalog
Probability 1,00
Protein sequence
MLKTDFNQPKGSTIGVLRDGRTIQQTFDKMRYADTIQELRTMEPVGPRDVATVRRATEDSVLVNAPVYYDKNDTTSPDDGISVFVTAGGARWKFNTFKGYCAGLAGLKEDGSNVTTVVNGIVNRIVAKMVAAGRVNNQQRTVNIPVTGDAPEWKLTGPLVWPTVISLVFHGSVLLDGTSLTAGKILNCNNVPFMDRLTVAIMAAGTNPTDRPGRVNQAVGRAALTCIGGEVTVRLPGTQMDGSNNPTIHTVGAMIGNDAACLLDARDIYFEKFNIIGAKTGIEFGCYNTFMCGVEHFNVSRCYDGFSSPTLGSNYGERMYLRNGTIGNMDRHGAYLVGGGDFTLENVSVDFLGGDLAHFGPLSPAEYKHLSGHIEGVKGSLAAKEMPASYSKALVILGKAVRRDDRVVDQNDYRGVRQLFACPQNPYGRMLKVINESYAPGREGQVPNNPYPCETGWPGNSGVELILPKDTFVDTPYVNSYSPAVRNSVNQTISFTTASTGPLGGNVLSTDYAFAAEIIGGATCSYGTPAEATSDGYMPFIITLSDPSDVVYLFCTNRFRPGSGQSVLWGNCSVTLVGTTGSIILAPVIASYLGTTWTANTTTGAVTATPIRRGIQEGGTVDMSALAAAGGIPNGTYQAMPSRSVQGFYLGCDHAVAGFKITGGTGQVRLKLPVWWFR
Physico‐chemical
properties
protein length:678 AA
molecular weight: 72419,17350 Da
isoelectric point:7,04664
aromaticity:0,08702
hydropathy:-0,09735

Domains

Domains [InterPro]

No domain annotations available.

Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage KN3-1
[NCBI] 		2282630 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
BBF66868.1 [NCBI]
Genbank nucleotide accession
LC413194 [NCBI]
CDS location
range 35635 -> 37671
strand +
CDS
ATGCTTAAGACCGATTTTAACCAGCCGAAAGGCTCAACCATTGGTGTGCTCAGGGATGGGCGCACTATCCAGCAGACATTCGATAAGATGCGGTATGCTGACACCATCCAAGAGCTTCGCACTATGGAGCCAGTAGGCCCACGCGATGTTGCAACAGTACGTAGGGCCACTGAGGACTCTGTACTGGTCAACGCCCCTGTGTATTACGATAAGAACGACACAACGTCACCGGATGACGGAATCTCAGTGTTCGTCACCGCAGGCGGTGCTCGCTGGAAGTTCAACACGTTCAAGGGCTATTGCGCAGGACTCGCTGGGCTGAAGGAGGACGGCTCTAACGTCACTACTGTGGTGAATGGTATCGTAAACCGCATAGTCGCCAAAATGGTGGCAGCGGGGCGCGTGAATAACCAACAGCGGACCGTTAACATCCCAGTGACCGGGGACGCTCCTGAGTGGAAACTGACTGGTCCTCTTGTGTGGCCAACTGTCATCTCTCTCGTTTTCCATGGCTCTGTACTGCTGGATGGCACATCACTCACGGCTGGTAAGATTCTCAACTGTAACAACGTACCGTTCATGGACCGACTCACCGTCGCCATTATGGCTGCTGGGACCAACCCCACAGACAGGCCGGGTCGAGTTAACCAAGCTGTGGGACGTGCAGCGCTCACCTGTATCGGCGGTGAGGTTACGGTACGTCTCCCCGGCACCCAGATGGATGGGAGTAACAACCCGACTATTCACACTGTCGGTGCTATGATTGGGAACGATGCTGCATGCCTGCTGGATGCTCGTGATATCTACTTTGAGAAGTTCAACATCATAGGTGCCAAGACTGGTATCGAGTTCGGGTGCTACAATACCTTCATGTGTGGTGTTGAGCACTTCAACGTGTCTCGCTGCTACGATGGGTTCAGTAGTCCGACTCTCGGTTCCAACTACGGGGAGCGTATGTATCTGCGCAACGGGACTATTGGCAATATGGACAGACACGGGGCTTACCTCGTAGGTGGTGGTGACTTCACCCTTGAGAACGTCTCTGTGGACTTCCTTGGTGGAGACTTAGCGCACTTCGGTCCACTGTCCCCTGCTGAGTACAAGCACCTGTCAGGTCACATTGAAGGTGTCAAAGGCTCCCTCGCAGCCAAAGAGATGCCTGCAAGCTACTCTAAGGCGCTGGTAATCCTCGGTAAGGCTGTACGCCGGGATGACCGAGTAGTAGACCAGAATGACTATCGTGGCGTTCGCCAGCTGTTCGCCTGCCCACAGAACCCATATGGTCGTATGCTCAAAGTCATCAACGAGAGCTACGCACCGGGACGAGAGGGACAAGTCCCTAACAACCCGTACCCTTGTGAGACTGGCTGGCCGGGTAACTCTGGGGTCGAGCTGATTCTGCCTAAAGACACCTTTGTGGATACACCGTACGTGAACTCGTATTCACCAGCGGTACGAAACAGTGTCAACCAGACAATCAGCTTCACCACAGCGAGCACCGGACCACTCGGTGGTAACGTACTGTCCACTGACTATGCGTTTGCTGCTGAGATTATCGGTGGGGCAACTTGCTCCTACGGTACACCAGCCGAGGCAACCAGTGATGGGTACATGCCATTCATCATCACGCTGTCTGACCCCTCAGATGTTGTGTACTTGTTCTGCACCAACAGATTCCGTCCCGGCTCCGGCCAGTCGGTACTGTGGGGCAACTGCTCGGTAACCTTGGTGGGCACCACTGGGTCTATCATCTTGGCCCCAGTAATCGCGTCTTACCTCGGTACCACTTGGACTGCAAACACCACAACGGGAGCCGTTACAGCCACTCCAATCCGACGAGGCATTCAGGAGGGCGGTACGGTCGATATGTCCGCTCTCGCAGCGGCTGGTGGTATTCCAAACGGTACCTACCAAGCGATGCCGTCCCGGTCTGTCCAAGGGTTCTACTTGGGATGCGACCACGCGGTTGCTGGCTTCAAGATTACTGGAGGTACGGGGCAAGTGCGCCTTAAGCTGCCAGTGTGGTGGTTCAGATAA

DepoCatalog

K-type Target
K56
Number of Rings

10

Structural Classification
Domain Ranges
N-terminal Domain
1-112
Central Domain
113-476
C-terminal Domain
477-678
Experimentally Tested K-types
K1-K82
KL101-KL105
Phage Morphotype

Podo-type

Tertiary structure

1 / 2
PDB ID
Source
Method
Resolution
Oligomeric State

Literature

Title Authors Date PMID Source
Identification of three podoviruses infecting <i>Klebsiella</i> encoding capsule depolymerases that digest specific capsular types Pan, Yi‐Jiun; Lin, Tzu‐Lung; Chen, Yi‐Yin; Lai, Peng‐Hsuan; Tsai, Yun‐Ting; Hsu, Chun‐Ru; Hsieh, Pei‐Fang; Lin, Yi‐Tsung; Wang, Jin‐Town 2019-01-01 — 10.1111/1751-7915.13370