Protein

View in Explore
Genbank accession
XNO98898.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,79
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MADQNLKQIQFKRTSTENKAPGADIVARGEIALNTHGRTLAIYTKDEADNVVQLAGKGVPFLDTSGTLSVDGTTTLKDNVTISPNKAISFETTDLSGNIVRHITGKCATNDGWYIGYGGTSNSGILEIGTIDNGNETIQFVQHGAGNVKARKLVLLDGSGNTTLPGDLRLTTNNTVKINSGSDLVLEMGVGSNDVYIKNQRGTGVLQLTNDSNLTFRNSQVYYAMNGRGPGKSGTLLTNVENNRQAWQYTISAATAGTPRWVKVATMKHSGMVSSQLDLMITGGIDSEHDKHHVDFITLSGRNLTSWSTSNLDKWVEWRRMGSPNKGNVPEYYVVKNDAATDSEASFDFYAKVPRWSSNLYVTVLNTAGYNGQYSGTVIIYETGQDTGATGPSGSILVSMKQIFDSYAKPDFSDTTGTLPVNRGGTGATNVGDARNNLGLGTAAVRNVGEGTGNLLENGAYGLGGNGGKSINDIVSNADMLTRLKAYGGTFWRGVTKSGVSVKNGLFSHGSGIFMNAGDTMSAINIDYASARVRVYAANNTSLAAGNVNYNELYGTANKPTKADVGLDNLTNDTQVKKAGDTMTGDLAAPNLHASGTDTASVYVNAGSGNAHVWFRTNANERGVIWATPNTADLGQINIRAKTTGDVSAGDFSFRSDGRLDVPVAVKVGGAAMLTKDGNITSGSMFDGNLNNYLTSIKNDIVAGDNKQVSKTGDTMTGNLTINANLKVENPNGTMVDLGSENSDKYSRLTLARKVGSGATVAMLKVTPEGHVQFGYQDAVATPAPTKYILVKSNGLVVEGDLVFNQTYCGAEDAINITDKTIDLNDLVIKRTDPGTRQLYKCVSSGGGNNISNKPTSDGNFVLEVLSLHKVYDTDWTCKQTFTTKNGNVEGTYVRYCQNGTWSAWKEVVAGVQPINLGGTGATSVAAARNNLGVGEGQTVTFGGLNVNGKMTVGGEFEAQNSKITGNLNVSEDNRMIVLGKNTDIGLVKKNGMPGKMAIGKSNSFTVMVSTNTNNQINPADTFNDIFKVDADGNQTVYGNAQVNRQLTVSSSATVNGIINANGGIIVPTTKYVQIADAPTQNNQATNKKYVDDKVASAISNAGDTYLPLAGGTVTGTLIVTGNQLKTTSLWTTGDAAVNGVLTVDGKARFNQEFSVSTSVNVQNDGNSHVFFRKANGTEKGLIWADDPGNVSIRTAGASGPVWNFWNSGSCQFPGAISNYNGISSTTNYPAGQPNGTYNNTAGLVSRFSNGAYASLYFQEYVGNYHQAILNVNGFGRDDNFYFRAGGDFFCTRNGSFDNVEIRSDRRAKSDIKVIENALEKVETLSGNTYELHNTSGGTTRSAGLIAQEVQEVLPEAVTQDNEEDGGMLRLNYNSVIALLVESVKELSAEVKGLKAEIEELKSK
Physico‐chemical
properties
protein length:1404 AA
molecular weight: 149093,56200 Da
isoelectric point:5,96164
aromaticity:0,07265
hydropathy:-0,35670

Domains

Domains [InterPro]
DC_1942
ATT
4–621
DC_1942 cd19958 DC_0246
DC_1159
STR
444–1044
DC_1159 IPR030392
IPR030392
CHP
1304–1359
IPR030392 Coil
XNO98898.1
1 1404
Architecture
ATT
STR
RBD
ATT 4-621 | STR 622-1044 | RBD 1045-1404
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XNO98898.1
1 1404
Domain Start End Length (AA) Confidence
N-terminal 1 981 981 0,1269
Central domain 982 1180 200 0,3751
C-terminal 1181 1404 223 0,9022
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-981
Central
982-1180
C-terminal
1181-1404

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage Roth77
[NCBI] 		3384141 Viruses >
Host Klebsiella sp.
[NCBI] 		576 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XNO98898.1 [NCBI]
Genbank nucleotide accession
PQ657821.1 [NCBI]
CDS location
range 153958 -> 158172
strand +
CDS
ATGGCCGATCAAAACTTAAAACAAATACAATTTAAAAGAACTAGCACAGAGAATAAAGCACCAGGTGCAGATATCGTAGCCCGTGGCGAAATCGCTTTGAATACACATGGGCGTACTCTCGCTATCTATACCAAAGATGAAGCTGATAATGTTGTTCAGCTTGCTGGTAAAGGGGTTCCTTTCTTAGATACATCTGGAACTCTTAGCGTTGATGGAACTACTACATTAAAAGACAACGTTACTATTTCTCCGAATAAAGCGATCAGTTTTGAAACTACTGATTTAAGCGGAAATATAGTACGTCATATCACTGGTAAATGTGCTACTAATGATGGGTGGTATATTGGTTATGGTGGTACAAGCAATAGTGGTATTCTTGAAATCGGTACGATTGACAACGGAAATGAAACCATCCAATTTGTACAGCATGGTGCTGGTAATGTTAAAGCCCGAAAACTGGTCTTACTTGATGGTTCTGGCAATACTACTCTTCCTGGTGATTTAAGATTAACCACTAATAATACTGTCAAAATTAACAGTGGAAGTGACCTTGTTCTTGAAATGGGTGTAGGCTCTAATGACGTTTATATTAAAAACCAAAGAGGTACGGGTGTTCTTCAATTAACCAATGACAGTAACCTTACGTTCAGAAATTCCCAGGTTTATTACGCCATGAACGGAAGAGGTCCTGGTAAATCCGGTACTCTTCTGACAAATGTAGAAAACAACCGTCAGGCATGGCAATACACTATTTCTGCTGCAACCGCTGGAACTCCACGTTGGGTTAAAGTAGCTACAATGAAACACTCGGGAATGGTTTCTTCGCAACTGGATTTAATGATTACCGGTGGCATTGACTCTGAACACGATAAGCATCATGTAGATTTTATTACATTATCCGGGCGCAATTTAACATCTTGGAGCACTAGCAATTTAGATAAATGGGTTGAATGGCGCAGGATGGGTTCTCCTAATAAAGGAAACGTTCCAGAATATTACGTTGTTAAAAACGATGCTGCTACAGATTCAGAGGCTTCATTTGATTTTTACGCTAAAGTTCCTCGATGGTCCAGTAATCTTTATGTTACGGTACTAAACACTGCCGGATACAACGGCCAATATTCAGGTACAGTAATTATCTACGAAACTGGCCAAGATACTGGTGCTACTGGACCGTCCGGAAGTATTCTTGTTTCAATGAAACAGATTTTTGACAGTTACGCAAAACCAGATTTCAGCGATACTACCGGTACTCTTCCGGTTAACCGCGGTGGTACAGGTGCTACTAACGTAGGAGACGCTCGAAATAACTTAGGTTTAGGTACTGCTGCTGTGCGTAATGTCGGTGAAGGCACTGGTAACCTTTTAGAAAATGGCGCTTATGGCTTAGGTGGCAACGGTGGTAAATCCATCAATGACATTGTCTCTAATGCAGATATGTTGACCCGTTTAAAAGCATATGGTGGTACTTTCTGGCGTGGTGTTACTAAATCTGGTGTTAGTGTTAAAAATGGTCTTTTTAGCCACGGCTCTGGTATTTTTATGAATGCTGGCGACACCATGTCAGCCATTAATATCGACTATGCTAGTGCTAGAGTTCGCGTATACGCGGCTAACAACACAAGTCTTGCCGCAGGAAATGTTAACTACAATGAACTTTATGGTACAGCAAACAAACCGACAAAGGCTGATGTCGGACTTGATAATCTGACAAACGATACCCAAGTCAAGAAAGCTGGCGACACCATGACTGGTGATTTAGCTGCACCTAATTTACATGCTTCCGGCACCGATACTGCATCAGTGTATGTTAATGCAGGAAGCGGAAATGCTCATGTATGGTTTAGAACAAACGCCAATGAACGCGGTGTAATTTGGGCAACTCCGAATACAGCGGACTTGGGTCAGATTAATATTCGTGCAAAAACTACTGGTGATGTTTCTGCCGGTGATTTTAGCTTCCGTTCTGACGGCCGACTTGATGTTCCTGTAGCAGTTAAAGTTGGTGGAGCAGCAATGCTAACCAAAGACGGGAATATTACCTCTGGTTCGATGTTTGATGGTAACCTTAACAACTATTTGACTTCTATTAAAAACGATATCGTTGCTGGTGATAATAAGCAAGTAAGCAAGACTGGTGATACCATGACCGGTAACTTGACTATTAACGCTAACTTAAAAGTCGAAAACCCTAATGGAACGATGGTTGATTTAGGTTCAGAGAACTCTGATAAGTATAGCAGATTAACCCTTGCTCGTAAAGTTGGTAGCGGTGCTACCGTAGCAATGCTTAAAGTTACTCCTGAAGGACACGTGCAATTTGGCTATCAAGATGCGGTTGCTACTCCAGCTCCTACCAAGTACATCCTTGTTAAATCTAACGGCCTTGTGGTAGAAGGTGATTTGGTTTTTAATCAGACTTATTGTGGTGCTGAAGATGCAATTAATATTACTGATAAGACCATTGACCTTAATGATCTTGTCATTAAAAGAACCGATCCAGGTACTCGTCAGCTGTATAAATGTGTATCTTCTGGCGGCGGAAATAATATATCGAACAAACCTACCTCTGATGGCAACTTTGTTCTTGAAGTTCTGTCTTTACATAAAGTTTATGATACCGATTGGACGTGCAAACAGACCTTTACTACAAAGAACGGTAATGTTGAAGGTACATATGTTCGATACTGCCAAAACGGTACATGGTCTGCATGGAAAGAGGTTGTTGCTGGTGTTCAACCGATCAATCTAGGCGGTACTGGAGCAACATCTGTAGCTGCTGCTCGTAATAATCTTGGTGTTGGTGAAGGACAAACTGTGACATTTGGTGGATTGAATGTCAATGGTAAAATGACTGTCGGTGGTGAGTTCGAGGCCCAGAACTCGAAAATCACAGGCAACTTGAACGTCTCTGAAGATAACAGAATGATCGTTCTTGGCAAAAACACCGATATCGGCTTAGTCAAGAAAAACGGTATGCCAGGAAAAATGGCTATCGGTAAATCTAACTCATTTACCGTTATGGTATCGACAAATACCAACAACCAAATTAATCCTGCTGACACATTTAACGATATATTCAAAGTTGATGCTGACGGAAACCAAACCGTTTACGGAAATGCCCAAGTTAACAGACAGTTAACTGTTTCTAGTTCAGCAACTGTTAATGGTATTATTAATGCAAACGGCGGTATCATTGTTCCTACTACCAAGTATGTACAAATTGCCGATGCTCCTACGCAGAATAACCAAGCCACCAACAAGAAATATGTTGATGATAAGGTTGCTTCTGCTATTAGTAATGCTGGTGATACATATCTTCCGTTAGCAGGTGGTACTGTAACTGGTACATTAATAGTTACAGGTAATCAACTGAAAACTACTTCTCTGTGGACTACTGGAGACGCTGCTGTTAACGGTGTTTTAACTGTTGATGGAAAGGCTAGATTTAATCAAGAGTTCAGTGTATCCACTTCAGTTAACGTCCAGAACGATGGTAACAGTCATGTGTTCTTCCGTAAAGCAAACGGTACAGAAAAAGGACTTATTTGGGCTGATGATCCTGGTAACGTTAGTATAAGAACAGCTGGTGCTTCTGGTCCGGTATGGAATTTCTGGAACAGTGGTTCTTGTCAATTCCCAGGAGCCATTTCTAACTATAACGGAATTAGCAGCACTACTAATTATCCTGCAGGACAACCTAATGGTACATATAACAATACCGCAGGATTGGTATCTAGATTTAGTAATGGTGCTTATGCTTCGTTATATTTCCAAGAATATGTAGGAAACTACCACCAGGCTATTCTTAATGTTAATGGATTCGGTCGAGATGACAATTTCTATTTCAGGGCTGGCGGCGACTTCTTCTGTACTCGCAACGGGTCATTCGATAACGTAGAGATTCGTTCTGACCGTAGAGCTAAATCTGATATTAAAGTTATTGAAAACGCTTTGGAAAAAGTAGAGACCTTAAGCGGTAATACTTACGAGCTTCATAATACTTCTGGCGGTACTACTCGTTCTGCTGGGTTGATTGCTCAAGAAGTTCAAGAAGTTCTTCCTGAAGCAGTTACTCAGGATAATGAAGAAGATGGCGGTATGCTTCGTCTGAATTATAACTCAGTAATTGCTCTTCTTGTTGAATCAGTGAAAGAACTTTCAGCTGAGGTCAAAGGTCTTAAAGCCGAAATTGAAGAACTTAAATCTAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
5abdac8432000163be884ae2dba785a3bddb2370f8fdacfd5cc201152c9eea2b
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5069
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
KlebPhaCol: A community-driven resource for Klebsiella research identified a novel gut phage order associated with the human gut Rothschild-Rodriguez,D., Lambon,K.S., Latka,A., Costa,A.R., Mantzouratou,A., King,C., Boeckaerts,D., Sheridan,E., Merrik,F., Drobniewski,F., De Angelis,I., Saeed,K., Sutton,M., Wand,M., Andrew,M., Hedges,M., Brouns,S.J.J., Haas,P.-J., Krishnakant Kushwaha,S., Lawson,S., Fordham,S., Lee,Y.-J., Wu,Y., Briers,Y., Weigele,P. and Nobrega,F.L. 2024 — GenBank