Protein

View in Explore
Genbank accession
UGV21630.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MADLLPTVKVSDLPTATDSFEGDFLVVDQSDATRKSTWSNVFSRFGIMRLFSFQDGGTLISAKDQVIDRSTNKIYQWTGAYPKLVPANSTPASTGGVGTGGWSVNDPALRGDLAGPSGSSYVGGPAGTVAQSLDGFVTPSQFVGKYPTTTEAVTAMVAYAKANKKAVLAWGWNLVLETSVYIDGVEWYGGSFNQSGGNRYMYLSNSTFRWVTFTGVCTRHYGGRLIITDSSWVNNTNTAAMLLQALPVDGTIDILDSDFRGCKYGILQQGTGALITRARFARLNFNDLTGDAIECNVVNRHYKAGGLTIEDINIDNINNTDNSPNWGIGIGVAGQGPYGANASDDQYVSGIIIRNVKMRRVRQCIHFELCRDFKVENVEVYPDASVSNGTLLASGGVVCYGSKDFIIDGVRGEMVNGASRFIYFGWGVNAGVYAAPCRDFTLRNVRSHTGLVDVPVSAADDWTNTVTIEDVECDTFKYRGLVSRLRLANIRCNKFDGIGDYEAGQGEAGGAMKRWAWCSAEILNITSLDANGVANGSFGQVGFDHVTTYGCNFDVVQHSKTNGNRGVELLNAGNIYISDNDLFPQGKEFVKGDIILKKTGGMFVVETAGSYIEPNDFIKATTVGSKTIQCAADSGVSQPWATRAFKSAGLQLTIPGAGAGGSDLKTTVIRAPYQKGAWTTPFYLDIADPIQTATPDNTALVSTNPVVYSERT
Physico‐chemical
properties
protein length:712 AA
molecular weight: 76529,82160 Da
isoelectric point:5,38654
aromaticity:0,10112
hydropathy:-0,13904

Domains

Domains [InterPro]
DC_1918
ATT
1–495
DC_1918
G3DSA:2.10.10.80
ATT
47–115
G3DSA:2.10.10.80 DC_0045
IPR040775
RBD
52–103
IPR040775
UGV21630.1
1 712
Architecture
ATT
RBD
ATT 1-495 | RBD 496-712
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
UGV21630.1
1 712
Domain Start End Length (AA) Confidence
N-terminal 1 147 147 0,9917
Central domain 148 582 436 0,9947
C-terminal 583 712 129 0,9384
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-147
Central
148-582
C-terminal
583-712

Taxonomy

  Name Taxonomy ID Lineage
Phage Cronobacter phage EspYZU08
[NCBI] 		2836140 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Cronobacter sakazakii
[NCBI] 		28141 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UGV21630.1 [NCBI]
Genbank nucleotide accession
MW882934 [NCBI]
CDS location
range 48740 -> 50878
strand -
CDS
ATGGCAGATCTATTACCTACCGTCAAGGTCTCAGACTTACCTACTGCGACGGATTCTTTCGAGGGAGATTTTCTGGTTGTTGACCAATCAGATGCGACACGTAAATCTACGTGGTCAAATGTCTTCTCTCGTTTCGGCATCATGCGTCTGTTTTCCTTTCAGGATGGTGGGACGCTGATCTCAGCGAAAGACCAGGTAATTGACCGCTCAACCAACAAGATTTACCAGTGGACAGGTGCATACCCTAAACTGGTTCCAGCCAACTCTACCCCGGCAAGTACCGGGGGTGTTGGTACTGGAGGCTGGTCTGTTAATGATCCAGCCCTTCGTGGTGATCTTGCAGGTCCGAGTGGCTCAAGTTATGTTGGTGGCCCAGCCGGTACTGTGGCACAATCCCTCGACGGGTTTGTAACCCCTTCCCAGTTCGTTGGGAAATATCCCACCACAACCGAGGCTGTGACCGCAATGGTCGCGTATGCAAAGGCCAACAAGAAAGCTGTCTTGGCTTGGGGATGGAATCTTGTTCTTGAAACAAGTGTTTACATCGACGGAGTAGAGTGGTATGGCGGAAGCTTTAACCAGTCTGGCGGGAACAGATATATGTACCTGTCAAATAGTACATTCCGTTGGGTAACGTTCACGGGTGTCTGTACACGACACTACGGTGGTCGCTTGATTATCACTGACTCCTCATGGGTTAATAACACAAACACTGCTGCAATGCTGTTGCAGGCTCTTCCTGTTGATGGTACTATCGACATTCTGGACAGTGATTTCCGTGGGTGTAAATATGGTATCCTCCAACAAGGTACAGGTGCGCTTATCACCCGCGCTCGGTTTGCCCGTCTCAACTTCAATGATTTGACAGGGGATGCAATTGAGTGTAACGTTGTTAACCGTCACTACAAGGCAGGTGGTCTGACTATCGAAGATATTAACATTGACAATATCAACAATACAGATAACTCACCAAACTGGGGTATCGGTATCGGTGTTGCAGGACAAGGCCCATACGGTGCGAACGCCTCTGATGACCAATACGTCAGCGGGATCATCATTCGTAACGTCAAGATGCGTCGTGTTCGTCAGTGTATCCACTTCGAACTGTGCCGAGACTTCAAGGTAGAGAACGTAGAGGTTTATCCAGATGCTTCCGTTTCCAACGGAACGCTACTCGCCTCTGGTGGTGTTGTTTGCTACGGCTCCAAGGACTTCATCATTGATGGTGTTCGTGGTGAGATGGTTAACGGCGCCTCACGTTTCATCTACTTCGGTTGGGGTGTGAACGCAGGTGTTTATGCTGCTCCTTGTCGTGATTTCACGCTGAGAAACGTGCGTAGCCATACTGGTCTCGTTGATGTGCCTGTGAGCGCTGCTGATGACTGGACAAACACTGTGACGATTGAGGATGTTGAATGTGACACCTTCAAGTACCGTGGTCTTGTGTCTCGTCTTCGTCTCGCAAATATCCGTTGTAACAAGTTCGACGGTATTGGTGACTACGAAGCTGGTCAGGGTGAAGCAGGTGGCGCAATGAAACGTTGGGCTTGGTGTTCTGCCGAGATCCTCAACATTACGAGCCTTGATGCCAATGGTGTCGCAAACGGTAGTTTTGGTCAGGTTGGTTTTGATCACGTAACAACTTACGGCTGTAACTTTGATGTTGTTCAGCATTCAAAGACAAACGGAAATCGTGGAGTAGAGTTACTCAACGCAGGGAACATCTACATCTCAGATAACGACCTCTTTCCGCAAGGCAAGGAGTTTGTTAAGGGGGATATCATTCTGAAGAAGACTGGGGGGATGTTTGTTGTTGAGACGGCGGGGTCTTACATTGAACCGAATGACTTCATCAAGGCTACGACTGTCGGCTCCAAAACGATTCAGTGTGCAGCCGATTCCGGAGTGAGTCAACCTTGGGCGACTCGTGCGTTCAAATCTGCGGGATTACAACTTACAATCCCCGGCGCTGGCGCTGGAGGTTCAGATTTGAAAACCACGGTCATCCGCGCACCATACCAAAAGGGAGCTTGGACAACACCGTTCTACCTTGACATTGCTGACCCAATTCAGACGGCAACGCCTGATAATACAGCACTTGTTTCAACAAACCCGGTAGTATACAGCGAAAGGACTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
cfba01b4633e6cb30e9e3a21a81661bafdd3e206f91000ef25b5a5e0541e14e4
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7338
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and characterization of broad host-range of bacteriophages infecting Cronobacter sakazakii and its biocontrol potential in dairy products Li,H., Yang,X.-J., Zhu,X.-Y., Gao,L., Rao,S.-Q., Yuan,L. and Yang,Z.-Q. 2021 — GenBank