Protein

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Genbank accession
CAB5225519.1 [GenBank]
Protein name
Pectate lyase superfamily protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MAVFLSPLGGVGAQFFDNNGDPLTGGKLYTYAAGTTSPQVTYTSAAGISAHSNPIILDAGGRVPGGEIWLADGVQYKFVLKNSSDTTLATYDNLVGINSNFVNYTSEQEIQTAAAGQTVFTLTTMQYQPGTNSLSVFVDGVNQYGPGAPYAYFETNGTTVTFASGLHLGALVKFTTTAVNASSYGDAFQISYTPPFTGSVATNVGDKLRQYVSVKDFGAVGDGVINDTAAIQNALNSGAKQVLLNAGNYNTTAPIVIPSGVSFVGEGQRLSLIKKNHAGDGVTLTNALAYNGLDIGGFSVYAVAPHLLTGTGIKLTQIVRTNFNDINVSDCSYGFSMLTGYANSINNLTIDRCSVGLFIQTSNHNNFNVVTIISNTGFTGLEMTGTSYSNHFDTLDVEYALYPLWLKSGTTSVTFTNYYAEFNTKGARLDSGVKAIRFDTVFNASVELFDTATFAATSVEVNNLVDDYPVGIGGVSVRGNIGTPGISTTQNDVLFQQGALSSAYDFSDFSKFGLNAGSYFEWSGEPRKNYVNSQDLSSGAQWVGSGTVTAVGSPTIGGVTTYRFAAGAFRTHSITTDSAMAGRTFTVCVLVNGPAGGKFDLRQSDNVTATQTKTYVIGAGGLRYVFFTASWGAGSTGSNIAFTIFNTGSTTLDFALPCIWESPGPIPLTTRTRNESGYTGYSIVSFQNFGATVKVFGGAAPTTGSWKVGDVVMHTTPAAAGFMGWVCTTAGTPGTWKTFGAIAP
Physico‐chemical
properties
protein length:744 AA
molecular weight: 78076,88020 Da
isoelectric point:5,21460
aromaticity:0,11694
hydropathy:0,04489

Domains

Domains [InterPro]
DC_0138
STR
1–107
DC_0138 IPR012334 DC_0276
IPR011050
STR
210–487
IPR011050
IPR024535
ENZ
211–386
IPR024535
CAB5225519.1
1 744
Architecture
STR
STR
RBD
STR 1-107 | STR 174-596 | RBD 603-744
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
CAB5225519.1
1 744
Domain Start End Length (AA) Confidence
N-terminal 1 226 226 0,9923
Central domain 227 521 296 0,9874
C-terminal 522 744 222 0,9350
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-226
Central
227-521
C-terminal
522-744

Taxonomy

  Name Taxonomy ID Lineage
Phage uncultured Caudovirales phage
[NCBI] 		2100421 Uroviricota > Caudoviricetes > Peduoviridae > Maltschvirus maltsch >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
CAB5225519.1 [NCBI]
Genbank nucleotide accession
LR798347 [NCBI]
CDS location
range 19320 -> 21554
strand +
CDS
ATGGCGGTTTTCCTTTCCCCACTTGGCGGCGTAGGCGCGCAGTTTTTTGACAACAACGGCGACCCGTTGACTGGCGGAAAGTTGTACACCTACGCGGCGGGCACTACATCTCCCCAGGTTACTTACACATCAGCGGCGGGGATTTCTGCCCACTCTAACCCCATCATTCTTGATGCGGGCGGGCGCGTGCCTGGGGGTGAGATTTGGCTGGCCGACGGCGTGCAATACAAGTTTGTGCTGAAAAACAGCAGCGACACCACGCTTGCAACCTATGACAACTTGGTTGGCATCAACAGCAACTTTGTCAACTACACCAGCGAGCAAGAGATTCAGACGGCTGCCGCCGGCCAAACCGTTTTCACTCTTACGACTATGCAGTACCAACCGGGTACTAACAGTCTTTCGGTGTTTGTTGACGGCGTAAACCAGTATGGCCCGGGCGCTCCGTATGCGTATTTTGAGACCAATGGCACCACGGTAACGTTTGCCAGCGGCTTACATTTGGGCGCGTTGGTAAAGTTTACTACGACAGCCGTTAACGCTTCGTCCTACGGCGATGCGTTCCAGATCAGCTACACCCCTCCGTTTACGGGGTCTGTAGCGACCAACGTAGGCGACAAACTTCGCCAGTACGTGAGCGTCAAAGATTTTGGCGCGGTTGGTGACGGAGTAATTAACGATACCGCAGCCATTCAAAATGCATTGAATAGCGGAGCTAAACAAGTCTTGCTGAACGCTGGTAATTACAACACAACCGCACCTATCGTTATCCCAAGCGGCGTGTCGTTTGTAGGTGAAGGCCAACGTCTCAGCCTCATTAAAAAGAACCACGCGGGCGATGGCGTTACCCTGACGAACGCCCTTGCGTACAACGGACTGGACATCGGCGGGTTCTCAGTTTACGCAGTGGCTCCGCATCTGCTAACGGGTACCGGCATTAAGCTAACGCAGATTGTTCGCACTAATTTCAACGATATCAACGTCAGCGATTGTTCTTACGGTTTTTCAATGCTGACCGGCTACGCCAACAGCATAAATAACCTTACGATTGACAGGTGTAGCGTTGGTCTGTTTATTCAGACTTCTAACCACAACAACTTCAACGTCGTTACGATCATTTCCAACACTGGGTTTACCGGATTGGAAATGACGGGGACAAGTTATTCAAATCACTTTGACACGTTGGACGTTGAGTATGCGTTGTATCCGTTGTGGCTGAAGTCTGGAACAACGAGCGTAACATTCACAAATTACTACGCTGAGTTCAACACCAAGGGCGCTCGCCTGGACTCTGGGGTCAAAGCAATTCGATTTGACACCGTGTTCAATGCAAGCGTGGAGCTATTCGACACTGCTACTTTTGCTGCTACGTCTGTTGAAGTCAACAACCTCGTTGATGATTACCCCGTTGGTATTGGTGGAGTTTCTGTTCGAGGCAACATTGGAACTCCGGGAATTAGCACAACGCAAAACGATGTGTTGTTTCAACAAGGCGCTTTGTCCTCGGCCTATGACTTTTCTGATTTTTCAAAGTTCGGCCTTAACGCTGGCTCTTATTTTGAATGGTCGGGGGAGCCACGAAAGAACTACGTCAACAGTCAAGATTTAAGCTCCGGCGCGCAGTGGGTGGGGTCTGGAACTGTTACCGCCGTAGGGTCTCCGACGATTGGCGGCGTTACTACGTATCGTTTTGCGGCTGGCGCTTTTCGCACCCACTCGATTACAACTGATTCTGCAATGGCCGGCCGCACGTTTACAGTGTGCGTGTTGGTAAATGGGCCTGCTGGCGGTAAATTTGATTTGCGTCAGTCTGACAATGTAACCGCAACTCAAACAAAAACGTATGTGATAGGCGCCGGCGGTCTGCGGTATGTGTTCTTCACAGCTTCGTGGGGCGCAGGTTCAACAGGCTCAAACATTGCGTTCACTATTTTCAATACCGGCTCTACGACGTTGGACTTTGCGCTGCCTTGCATCTGGGAATCTCCAGGGCCAATCCCGCTGACTACGCGCACCAGGAATGAATCTGGATATACCGGTTATTCCATTGTCTCGTTCCAAAATTTTGGCGCGACAGTGAAGGTGTTTGGCGGTGCTGCGCCGACAACTGGGTCGTGGAAAGTCGGAGATGTGGTGATGCACACCACCCCTGCGGCTGCTGGATTCATGGGATGGGTCTGCACAACGGCGGGAACCCCCGGAACTTGGAAAACATTTGGGGCGATTGCGCCGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
6f27a6a7142e581e1ffd9c7cb9ec53581ac91db1d408d61e41a2a4fb748f188b
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7714
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50