Protein

View in Explore
Genbank accession
AUS01544.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MSDLDNAINSINASAVKAENTATFLDDMSTFDDQSSVTNPNNGQTVASISKQVKDRTDELFTAAESDINQAVADSAQSATDAQDAADSIGRYQGLWPDSGGTADKGDTYQTQVSGTPTGQYFTALQNTTVDPVSDDVNWRTVVSTNTLGGFSTYRAESIADMILGITASGAVPQTVGSYWNVGGEVYERASLSNGDINDFRRANNGVDSLLDTGDVLFPENGSLSVGDVIPSGVTHLSVGGRVFQQVPTRSGTVNEIIEGQVLVGSVKCQLISNYQLNKATPAAVISKRLRDGTATNIACYGDSTMWGATVGDLLTQNPNNSPAMLNEALNQIYGGGIATVSNRGQSGATIRQMISGGDGSGSTFAEKLIQGGLDADANVVYCNHGTNDSTGNNDITQYKLDLMTFISHVRLHDKTPILITPNPKTIGQFVDETKLKNLQHYVNAMREVASQYDVALVDQYELFSLSNNIFRPDEIAPDGVHLSNGAYRQAGYNLAIPLVNTATVTESIPVTLNKTSWTDNFSVNRAIQNNTTAIGGFAVKADRATDEGINIPFILNEGSRVFDISGLKWSNGTVVDAYINKVNLGQKLDFEATAGSTSYINYDSRQTIWARFYAGLNVAGLIFDSSEVGANNQIAIGGVVKPTVEGASVTSITGANLKPVRIGMYEQLVTTFNFTLGGDKLTLADLGGNDAIQIYITSGGDLTLDVILDGSVEQTSVLSSGVNANTYPVNYYYDGSDISVNIGSLSSSTSRQGIPELYLKTPNLVFSVTRILP
Physico‐chemical
properties
protein length:774 AA
molecular weight: 82289,94500 Da
isoelectric point:4,45410
aromaticity:0,07364
hydropathy:-0,18669

Domains

Domains [InterPro]
DC_0205
STR
1–470
DC_0205 DC_1804
IPR051532
Unmapped
229–494
IPR051532
IPR036514
STR
296–499
IPR036514
SSF52266
STR
297–494
SSF52266
IPR013830
ENZ
300–489
IPR013830
AUS01544.1
1 774
Architecture
STR
RBD
STR 1-499 | RBD 500-774
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 1.286.O._10N.286.55.C4
[NCBI] 		1881280 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio cyclitrophicus
[NCBI] 		47951 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AUS01544.1 [NCBI]
Genbank nucleotide accession
MG592656.1 [NCBI]
CDS location
range 30787 -> 33111
strand +
CDS
ATGAGCGATTTAGACAACGCTATAAATTCAATTAACGCATCAGCAGTTAAGGCAGAAAACACCGCTACCTTCCTGGATGATATGTCGACGTTTGACGATCAATCAAGCGTAACTAACCCAAACAACGGCCAAACTGTTGCATCTATATCTAAGCAAGTAAAAGATCGCACAGACGAGTTGTTTACCGCTGCTGAGTCGGATATTAACCAAGCAGTAGCTGACTCGGCACAAAGCGCAACCGATGCACAAGATGCTGCGGATAGTATTGGTCGCTATCAGGGTTTATGGCCTGATTCTGGCGGCACTGCTGATAAAGGTGATACATACCAAACTCAAGTAAGCGGTACCCCAACAGGTCAATATTTTACAGCGCTGCAAAATACAACAGTCGATCCGGTTAGTGATGATGTCAATTGGCGAACGGTTGTTAGTACCAACACTCTCGGCGGGTTTAGTACTTACCGAGCTGAAAGCATTGCGGATATGATTTTGGGAATTACCGCCAGCGGCGCTGTGCCTCAAACGGTGGGGAGTTACTGGAATGTTGGTGGCGAGGTTTACGAAAGGGCTTCACTAAGTAACGGCGACATTAACGACTTCAGACGTGCTAACAATGGTGTCGATTCTCTACTTGATACTGGTGACGTGTTATTCCCCGAAAACGGATCTCTGTCTGTAGGTGACGTCATACCAAGTGGAGTTACTCACTTGTCAGTTGGTGGCCGAGTATTTCAGCAAGTTCCTACGAGAAGCGGGACTGTAAATGAGATAATTGAAGGTCAGGTTCTTGTTGGGTCAGTTAAGTGTCAGTTAATCTCAAATTATCAACTAAACAAAGCAACGCCAGCAGCAGTTATAAGCAAACGGCTTCGTGATGGTACTGCAACTAATATCGCGTGTTACGGTGACTCTACCATGTGGGGCGCAACGGTTGGGGATCTACTTACACAAAACCCTAACAATTCACCTGCAATGCTAAATGAAGCTTTAAACCAAATATACGGCGGCGGTATTGCCACAGTTAGCAATAGAGGTCAATCAGGTGCAACAATTAGACAAATGATCTCCGGTGGTGACGGGTCCGGCAGTACGTTCGCAGAAAAGTTAATTCAAGGCGGGTTAGACGCTGACGCTAATGTTGTATACTGCAATCACGGCACTAATGATTCGACCGGAAACAACGACATAACGCAGTACAAACTAGACTTAATGACTTTTATTAGTCACGTACGTCTGCATGATAAGACACCGATTCTAATAACACCAAACCCTAAGACTATTGGTCAATTCGTAGACGAAACTAAGCTTAAAAACCTACAGCACTATGTTAACGCAATGCGTGAGGTTGCAAGCCAGTACGACGTAGCACTAGTGGACCAGTACGAGCTTTTTAGCTTGTCGAATAACATCTTTCGTCCAGATGAGATCGCCCCTGATGGCGTTCACTTGAGTAATGGAGCATACCGACAGGCGGGTTATAACTTAGCAATACCTTTAGTTAACACGGCAACTGTTACAGAAAGCATACCCGTAACGCTTAATAAAACATCATGGACAGATAACTTTTCTGTTAACAGGGCTATACAGAATAACACCACGGCAATAGGTGGATTTGCAGTAAAGGCAGATCGTGCGACTGATGAAGGCATTAATATACCTTTCATTTTGAACGAGGGCAGTCGGGTTTTTGATATCTCTGGGTTAAAATGGAGCAACGGCACAGTAGTTGATGCTTACATTAATAAGGTAAACCTAGGCCAAAAGTTAGACTTTGAAGCGACCGCGGGTTCTACATCTTATATAAACTACGACTCTAGGCAGACGATATGGGCGAGATTTTATGCAGGGCTTAACGTTGCCGGCCTTATCTTTGACAGCTCAGAGGTAGGAGCCAACAATCAGATTGCTATTGGCGGAGTCGTCAAGCCAACGGTAGAGGGCGCTTCTGTAACGTCGATAACAGGTGCCAACCTTAAGCCTGTTAGAATTGGGATGTATGAGCAGTTAGTTACTACATTTAACTTCACACTTGGTGGAGATAAATTAACACTGGCGGATTTGGGCGGGAATGACGCGATTCAAATATACATAACATCGGGCGGAGATTTAACACTGGATGTTATTCTAGATGGCAGTGTGGAGCAGACATCTGTACTGTCTAGCGGCGTGAACGCTAATACATACCCTGTAAATTACTACTATGACGGCAGCGATATCTCCGTAAATATTGGATCTTTATCCTCTTCTACGTCCAGGCAGGGAATTCCTGAGCTTTACCTAAAAACACCAAATTTAGTGTTTAGTGTCACTAGAATCCTTCCTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
bdf187c7733ad97670ba903f8b250353877dc1f666bc70ff9c34322e1faff503
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7326
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A major lineage of nontailed dsDNA viruses as unrecognized killers of marine bacteria Kauffman,K.M., Hussain,F.A., Yang,J., Arevalo,P., Brown,J.M., Chang,W.K., VanInsberghe,D., Elsherbini,J., Cutler,M.B., Kelly,L. and Polz,M.F. 2018-01-24 — GenBank