Protein

View in Explore

Genbank accession

UJD05077.1 [GenBank]

Protein name

tail fiber protein

RBP type

Evidence GenBank

Probability 1,00

Protein sequence

MVLQNIVTGYTIASIQHSIFSDYDVIGRTFWLTTGGVTTRRDFTGVDTFIATINNLIAGATYSAQGAFYDSMVDAELMAAKVGMNLSSTVNFKMKTAPKITKVSSFAESVDVGVGAPMVVVELSGEAEYVTIEMKPEGSSTWTKYYRGPITEQIIFGGVPVGRYNIRVSGVVTMPDGVTVDVSGYDTWPSLFNLTYNFTPPSAPTNLRFKTAHIQDGMERFDVRLEWDWTRGAGANVREFIIQYISNDEFAKTGWTKANKLNVGAAKAGTITSFPYKIRHRFRVLSVAWGPDTQSITNSTEVTYIIDESTTFDNAFINETGVEMTYAGIKGKLWNSNTKQWEQTFLVDAATGAVVLGTLDENGKAPISFDPVNKIVNVDGKVITKDINAANVILTNLTGKDNPAIFTQGKKYGNNAGGVWMGVDNVDGKAKFDLGNNTQYVRWDGDTLRISGNVVIGTPGGDVDLETGMQGKQTVFAYKLGTSLPSRPLDQVYPPTGWSAFPPNRTDQNQNVYVVQGTLDPKKNPPALVDGTNYSAASQWSGVPGTGGTDGSNGDYTVQIYQISANKPTKPGNINDPSGWSRTPPTGTPLWMCSGRFNGNTNALTVEGWSDPIRVDGEKGATGATGATGPQGSKGDTGATGPQGPQGPKGNAGDNAKGFALTSDYQSFVYDTAGDIKSAATILFKGLKQNTTAGITWSAVNDKGAAVTLMNSGDNRQLTAANFGASKWVTVTATCDGLSDQITVVRLQDGENVLTAVLTNEAATVLSNYSGYWQSLENAKGQMRVWYGSTDVTSQCTFSEGGRSNATPSINSSNGNYSVTDMSNGTDITEGWVDIKATHPKYGAITKRFAVTKVFLAKSYEMLITSTFENGKKGSWDGAVQDVTGPTNQSITKALRITSRDTLEGKNTIPVVPGQKVRIRFWYNAEGLQEAHFRAGFIIQRNAGGRSYPSRTILTGPSSNNSWVYFDQELTLGTNDGGIARPWFQLDNKTTGAPLGSVLIGDIHFEDLTMDGADGATGATGPQGPQGGKGDTGATGPQGSKGDTGPQGNKGDTGATGATGPQGPQGPSGTNAKAFALTSDSLSFSFDTDGNLKSNGTIKIDSWRQNTSASITWTAKNQAGANIALGGTATNKTITSAQFGSSDYVTVTATCDGMTDTITIVRLQDGVNSLVGYLTNESASVLCNPYGFIQNWNGTNGHFKVFYGTVDVTSQCTFGVEVVSGVDQKENLNGNINSSGYYSPSGMPDGVDVVSGWVNYQATHPKYGTLVKRYTLKKSIPGIGYDRVMTGSFDNGSSSSWGKPIVDVTGGDPGGHKKAFSVNSRDTYEGNNWFPTKKGMKYRITAWVNNSGGEYALNVGLHCRSADRDNTGWPVSTVAPAKDATGWRLESRVITVGDRSDGKPTVEARPFIQMGGGANPFGIAYIAAIAIEDLSMDGADGATGPQGPQGNTGPQGPQGNKGDTGPQGNKGDTGATGPQGPAGNSVNVQWSKDGSTNWHSTFTSGDLYMRQQVNGSWGPAIRAVGENGANGTPGSKGNYVSMKFAVMASTPSRPSGSNPAGWSDSPPPGSPLWMVKAEFNGETNAIMGNWSDPIRLDGDSINENLFYFKAWLDSITGVAGNGSSIGKNYELLRARIIAGTGVTDAYTNPSDGPTSMFTYLPPSTTYTMSFETDNAVEVRCHVFWYAKGSNSTGGVLKTIASTTAGLSSFTFTTPANSDRISVRFSVNESGGNNVVGRCKIEKGPFVTAYVRNQYDAVGDRGPGFYTQPISNLTAWNDTQAASFFQSTFAGPPVKYDVLTQYKSGSPQNSWTRQWNGSAWTAPALTVHGDMIVSGSITADKIIANNAFLAQIGVDILYNRAAALSSNPEGTYTMKIDLANGYIHIR

Physico‐chemical properties

protein length:	1881 AA
molecular weight:	199885,13110 Da
isoelectric point:	5,89121
aromaticity:	0,09463
hydropathy:	-0,38543

Domains

Domains [InterPro]

IPR057550
STR
1–87

IPR057550 IPR057551 IPR057552 IPR057549 PTHR24637 IPR057549

IPR057551
STR
95–185

IPR057551 DC_1191 DC_0456 G3DSA:2.60.120.260 IPR008160 DC_1665

DC_1333
STR
545–672

DC_1333 DC_0456 G3DSA:2.60.120.260 IPR008160 DC_1191

DC_0456
STR
1070–1280

DC_0456

UJD05077.1

1 1881

Architecture

STR

STR 1-87 | STR 94-185 | STR 200-1280 | STR 1282-1881

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Domains [InterPro]

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR057550	STR	DC_0866	1	87	InterPro cluster	Straight fiber protein PB4, first Fn3-like domain	N-terminal	Medium	Text match	229 proteins / 229 hits
IPR057551	STR	DC_0197	94	185	InterPro cluster	Straight fiber protein PB4, second Fn3-like domain	N-terminal	Medium	Text match	230 proteins / 230 hits
IPR057551	STR	DC_0197	95	185	InterPro cluster	Straight fiber protein PB4, second Fn3-like domain	N-terminal	Medium	Text match	230 proteins / 230 hits
IPR057552	STR	DC_0003	200	324	InterPro cluster	Straight fiber protein PB4, third Fn3-like domain	Central	High	Text match	998 proteins / 1603 hits
DC_1191	STR	DC_1191	236	560	Novel HMM	DC_1191	Central	Low	Positional only	75 proteins / 75 hits
IPR057549	STR	DC_0351	341	555	InterPro cluster	Straight fiber protein PB4, spike domain	C-terminal	High	Text match	247 proteins / 290 hits
DC_1333	STR	DC_1333	545	672	Novel HMM	DC_1333	Central	Low	Positional only	26 proteins / 26 hits
PTHR24637	Unmapped	-	567	1538	PANTHER	COLLAGEN	-	-	-	-
DC_0456	STR	DC_0456	654	785	Novel HMM	DC_0456	Central	Low	Positional only	38 proteins / 38 hits
DC_0456	STR	DC_0456	784	1073	Novel HMM	DC_0456	Central	Low	Positional only	38 proteins / 38 hits
G3DSA:2.60.120.260	STR	G3DSA:2.60.120.260	861	1007	Merged direct domain	G3DSA:2.60.120.260	Central	Low	Positional only	264 proteins / 264 hits
IPR008160	STR	DC_0536	1015	1071	InterPro cluster	Collagen triple helix repeat	C-terminal	High	Text match	355 proteins / 386 hits
DC_0456	STR	DC_0456	1070	1280	Novel HMM	DC_0456	Central	Low	Positional only	38 proteins / 38 hits
DC_1665	STR	DC_1665	1282	1519	Novel HMM	DC_1665	Central	Low	Positional only	5 proteins / 5 hits
G3DSA:2.60.120.260	STR	G3DSA:2.60.120.260	1284	1425	Merged direct domain	G3DSA:2.60.120.260	Central	Low	Positional only	264 proteins / 264 hits
IPR008160	STR	DC_0536	1434	1480	InterPro cluster	Collagen triple helix repeat	C-terminal	High	Text match	355 proteins / 386 hits
DC_1191	STR	DC_1191	1499	1881	Novel HMM	DC_1191	Central	Low	Positional only	75 proteins / 75 hits
IPR057549	STR	DC_0351	1753	1860	InterPro cluster	Straight fiber protein PB4, spike domain	C-terminal	High	Text match	247 proteins / 290 hits

Taxonomy

	Name	Taxonomy ID	Lineage
Phage	Klebsiella phage PWKp9S [NCBI]	2863276	Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host	Klebsiella pneumoniae [NCBI]	573	cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Genbank protein accession

UJD05077.1 [NCBI]

Genbank nucleotide accession

MZ634344.1 [NCBI]

CDS location

range 23269 -> 28914
strand +

CDS

ATGGTACTGCAGAATATCGTGACCGGTTATACGATTGCGAGTATTCAGCACTCAATCTTTTCCGATTACGACGTAATTGGTAGAACTTTCTGGCTAACTACGGGTGGAGTAACTACCCGTAGGGACTTTACCGGCGTTGATACATTCATTGCCACAATTAACAATCTAATCGCTGGCGCTACCTACTCTGCCCAGGGTGCTTTCTATGACTCGATGGTTGATGCAGAGCTGATGGCTGCTAAAGTAGGTATGAACCTCTCTAGCACCGTTAACTTCAAGATGAAAACTGCTCCGAAGATCACTAAGGTGTCTTCTTTTGCAGAATCTGTTGACGTGGGTGTTGGTGCTCCTATGGTTGTCGTAGAGCTTTCTGGTGAGGCCGAATACGTTACCATCGAGATGAAACCTGAGGGTTCTAGTACCTGGACTAAGTACTACCGCGGGCCTATCACTGAGCAGATCATCTTTGGAGGTGTTCCGGTCGGCAGATATAACATCCGCGTATCTGGTGTTGTTACTATGCCAGACGGTGTTACTGTGGACGTTTCTGGGTATGATACCTGGCCGTCTCTGTTTAACCTGACGTATAACTTTACTCCTCCGTCTGCTCCAACTAACCTGCGTTTCAAAACTGCCCACATCCAAGATGGTATGGAGCGTTTTGACGTTCGTCTGGAATGGGATTGGACTCGTGGTGCGGGTGCTAACGTCCGTGAATTCATCATCCAATATATAAGTAACGATGAGTTTGCAAAAACTGGATGGACTAAGGCTAACAAGCTAAACGTGGGTGCAGCTAAAGCTGGTACTATCACTAGTTTCCCCTACAAGATCCGCCACCGTTTCCGTGTGCTATCGGTTGCTTGGGGTCCTGATACTCAGTCTATAACTAACTCTACCGAGGTTACTTATATTATAGACGAGAGCACTACTTTCGACAATGCATTCATTAACGAGACCGGTGTAGAGATGACCTACGCAGGTATCAAGGGTAAACTCTGGAACTCTAACACCAAACAGTGGGAGCAGACTTTCTTAGTAGATGCTGCTACTGGTGCAGTAGTTCTTGGTACACTAGATGAAAATGGTAAAGCGCCGATTTCATTCGACCCTGTTAATAAGATTGTAAACGTCGATGGTAAAGTTATTACTAAAGACATTAATGCTGCTAACGTAATTCTTACTAACCTGACTGGTAAAGACAACCCGGCAATCTTCACTCAGGGTAAGAAGTATGGTAACAATGCAGGTGGTGTCTGGATGGGTGTTGACAACGTTGACGGTAAGGCCAAATTTGACCTTGGTAATAACACTCAGTATGTGCGCTGGGACGGTGATACTCTTCGCATTTCTGGTAACGTTGTAATAGGTACTCCTGGAGGCGATGTAGACCTTGAAACCGGTATGCAGGGTAAGCAGACTGTATTTGCTTATAAACTTGGTACATCTCTGCCAAGTCGCCCGCTTGACCAAGTTTATCCGCCAACTGGATGGTCTGCATTCCCCCCTAACCGTACCGACCAGAACCAGAACGTTTACGTTGTTCAGGGTACTCTTGACCCTAAGAAAAATCCGCCTGCTCTAGTAGATGGCACCAACTACTCCGCCGCGTCTCAGTGGTCAGGTGTCCCAGGTACTGGTGGTACTGATGGTTCTAATGGGGACTACACTGTTCAGATTTACCAGATCAGTGCTAACAAGCCTACGAAGCCAGGTAATATCAATGACCCTAGTGGTTGGAGTCGCACCCCTCCTACTGGAACTCCTCTTTGGATGTGCTCTGGTAGATTCAACGGTAATACTAACGCCCTAACAGTAGAGGGCTGGTCAGATCCGATCCGAGTGGACGGTGAGAAAGGTGCAACTGGTGCTACGGGGGCAACTGGTCCACAGGGTAGTAAAGGAGATACTGGTGCTACTGGCCCACAAGGACCTCAGGGCCCTAAAGGTAACGCCGGGGATAATGCTAAAGGATTCGCGCTAACTTCTGACTACCAATCCTTCGTGTACGACACCGCGGGTGACATTAAATCTGCCGCCACTATTTTGTTCAAGGGACTAAAACAGAATACCACTGCAGGTATCACGTGGAGTGCTGTAAACGATAAGGGTGCTGCTGTAACGCTGATGAACTCTGGGGATAATCGCCAGCTAACCGCTGCGAACTTCGGCGCTTCTAAATGGGTTACTGTAACCGCTACTTGTGATGGTCTATCCGATCAGATCACAGTGGTTCGTTTGCAGGATGGTGAGAACGTATTGACTGCTGTTCTAACGAATGAAGCAGCTACGGTACTTTCTAACTACTCTGGTTACTGGCAGAGCCTAGAAAACGCCAAAGGTCAGATGAGAGTTTGGTACGGAAGCACCGACGTTACCAGTCAGTGCACTTTCTCTGAGGGCGGAAGAAGCAACGCAACACCAAGCATCAACTCAAGTAATGGAAACTACTCTGTTACTGACATGTCTAACGGAACGGATATTACGGAAGGCTGGGTTGATATTAAAGCTACTCACCCTAAATACGGAGCAATTACCAAGCGCTTTGCAGTAACTAAAGTGTTCTTGGCCAAGAGCTATGAGATGCTTATTACCAGCACCTTCGAGAATGGTAAGAAGGGTTCGTGGGATGGGGCTGTGCAGGATGTTACGGGTCCAACCAACCAAAGCATTACCAAGGCGCTACGAATCACTTCTAGGGATACCTTAGAAGGTAAGAATACCATACCGGTAGTTCCTGGACAGAAAGTCCGTATCAGATTCTGGTACAATGCCGAAGGGTTGCAAGAAGCACACTTCCGGGCTGGGTTCATTATCCAACGTAATGCGGGTGGCAGGAGTTACCCATCTAGAACTATCCTTACGGGTCCTTCTTCCAACAACTCTTGGGTGTATTTTGACCAAGAGCTAACTCTAGGTACTAACGATGGGGGTATCGCTCGGCCGTGGTTCCAGTTGGACAATAAAACTACGGGGGCACCGTTAGGCTCCGTTCTAATTGGGGATATCCACTTTGAAGACCTGACTATGGATGGTGCAGATGGTGCTACTGGTGCCACGGGCCCCCAGGGACCACAAGGTGGTAAGGGAGACACTGGGGCTACTGGACCACAGGGTAGCAAAGGGGATACTGGTCCACAGGGTAATAAGGGTGATACAGGAGCCACGGGTGCTACTGGTCCACAAGGTCCACAAGGTCCAAGCGGTACTAACGCCAAGGCTTTCGCACTAACGTCCGATAGTTTGTCTTTTAGCTTCGATACTGATGGTAACCTAAAGTCTAACGGTACTATTAAGATTGATAGTTGGAGACAGAATACTAGTGCTTCGATAACCTGGACGGCAAAAAACCAGGCAGGAGCTAACATAGCTTTAGGTGGCACAGCCACTAATAAGACTATTACCTCCGCCCAGTTTGGGAGCTCGGACTACGTTACAGTAACCGCAACATGTGATGGAATGACGGATACTATCACAATCGTTAGGTTACAGGATGGTGTGAACTCTCTAGTAGGGTACTTGACTAACGAATCTGCCTCTGTTCTATGTAACCCTTATGGGTTTATTCAGAACTGGAACGGCACTAATGGTCATTTCAAGGTGTTCTACGGAACGGTTGACGTTACTAGTCAGTGTACTTTCGGAGTAGAGGTTGTTAGTGGAGTTGACCAGAAAGAGAACTTAAATGGAAACATTAATTCCTCTGGCTATTATTCTCCTAGTGGTATGCCTGATGGTGTAGACGTGGTATCTGGCTGGGTCAATTACCAAGCTACTCATCCTAAGTATGGTACCTTAGTTAAGCGCTATACCCTTAAAAAGAGTATTCCAGGGATTGGTTACGATAGGGTTATGACGGGCTCTTTTGACAACGGATCATCGAGTAGCTGGGGCAAACCTATAGTTGATGTTACCGGAGGAGACCCGGGAGGGCACAAGAAAGCGTTTTCTGTGAACTCACGTGATACCTACGAGGGTAACAACTGGTTCCCTACTAAGAAGGGGATGAAATACCGTATAACAGCTTGGGTTAACAACTCAGGAGGAGAATATGCCCTTAACGTCGGTTTACACTGTCGAAGCGCGGATAGGGATAACACGGGATGGCCAGTATCTACCGTAGCTCCTGCTAAAGATGCTACTGGATGGCGACTGGAAAGCAGGGTGATTACTGTAGGGGACCGTTCTGATGGTAAGCCGACTGTCGAGGCCAGACCGTTTATCCAGATGGGTGGCGGCGCAAATCCTTTCGGCATTGCATACATTGCGGCTATAGCGATTGAAGACCTGTCTATGGATGGTGCAGATGGTGCTACTGGTCCACAAGGTCCACAAGGTAATACTGGTCCACAAGGTCCACAAGGTAACAAGGGTGATACTGGTCCTCAGGGTAACAAGGGCGATACTGGTGCTACTGGTCCGCAAGGGCCAGCAGGTAACTCTGTAAACGTTCAATGGTCTAAGGATGGGTCTACTAACTGGCACAGTACGTTCACTTCAGGTGATCTGTACATGCGTCAGCAGGTGAATGGATCCTGGGGTCCTGCGATCAGAGCAGTAGGTGAGAACGGGGCTAATGGTACTCCAGGTTCTAAAGGCAACTACGTAAGCATGAAATTCGCCGTAATGGCGAGTACTCCTAGTAGGCCTTCTGGTAGTAATCCGGCTGGCTGGTCAGATAGCCCTCCTCCAGGTAGCCCTCTATGGATGGTTAAGGCCGAGTTTAACGGGGAAACTAATGCTATTATGGGTAATTGGTCAGATCCTATTCGCCTAGACGGGGATAGTATTAATGAGAACCTGTTCTACTTTAAAGCCTGGTTAGACTCTATTACCGGAGTTGCGGGCAATGGCTCATCTATAGGTAAGAACTATGAGTTACTGAGGGCTAGGATAATTGCAGGTACAGGAGTAACCGATGCATACACCAACCCTTCAGATGGTCCTACTTCCATGTTCACCTACCTCCCTCCAAGCACTACGTATACTATGTCTTTCGAGACAGATAACGCTGTGGAAGTTCGTTGTCATGTATTCTGGTACGCTAAGGGAAGTAACAGCACTGGAGGGGTGCTGAAGACTATTGCGTCTACTACTGCAGGTTTGAGCAGCTTTACCTTCACTACACCGGCTAATTCAGATAGGATATCTGTTAGATTCTCTGTTAACGAATCCGGCGGGAATAACGTTGTTGGAAGGTGTAAGATTGAAAAGGGACCTTTCGTAACAGCATACGTTCGTAACCAGTATGATGCCGTAGGGGATCGTGGGCCGGGGTTCTACACCCAGCCGATATCAAACCTGACTGCGTGGAATGACACTCAAGCAGCATCGTTCTTCCAGTCAACCTTCGCTGGACCGCCAGTTAAGTATGATGTACTGACTCAGTATAAGTCAGGTTCCCCTCAGAACTCCTGGACTCGCCAATGGAATGGCTCAGCATGGACAGCTCCTGCACTAACTGTTCACGGTGATATGATCGTTTCCGGCTCTATCACTGCGGATAAGATTATTGCAAACAACGCGTTCCTGGCGCAAATTGGTGTTGACATCCTATACAATAGGGCTGCCGCACTGAGTTCTAACCCGGAAGGTACGTACACAATGAAAATAGACCTGGCTAACGGGTACATTCATATAAGGTAA

Genome Context

Tertiary structure

PDB ID

7a8fb35f87508dfed75d3409597e72a735845f835fe77b653f3b094e16bc3c5d

ColabFold

Source ColabFold

Method ColabFold

Resolution 0,7448

Oligomeric State monomer

Download PDB

Model Confidence

Very high
pLDDT > 90

High
90 > pLDDT > 70

Low
70 > pLDDT > 50

Very low
pLDDT < 50

Literature

Title	Authors	Date	PMID	Source
Lytic Bacteriophages against Mutidrug-Resistant Klebsiella pneumoniae: Development of an Effective Phage-based Approach to Combat Multidrug Resistance	Martins,W.M.B.S., Cino,J., Li,M., Lenzi,M.H., Sands,K., Portal,E., Mathias,J., Hansan,B., Dantas,P., Migliavacca,R., Hunter,J.R., Medeiros,E.A., Gales,A.C. and Toleman,M.A.	2021	—	GenBank

Protein

Domains

Domains [InterPro]

Domains [InterPro]

Taxonomy

Coding sequence (CDS)

Coding sequence (CDS)

Genome Context

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)

Model Confidence

Literature