Protein

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Genbank accession
QQV87844.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MAYGIDNVWSFVNDSQTGIDKVPVNKIILLKSENKLYLKKQEGGLTATSTVNEAILNNSIVSLSSDGNLGVVDSNIKVINDPEFTTTDNISKGKKMFKIAIEPDTIIQVLGLYIENTANSSIDAVPFDYIIKNNNVVIYTDNDTIPIKKIIYSKTKSSQLSLSSLPKLLTENLEWTVGTNGTFSNLVDALQEASKYISVTNYKITITMKSSYKLTESLHINNANLGHVVLTSEDDYVDFDGTMTPNPAFINQYAANPIAVSFTFGISPIISFKLRFSSVPTMFSMAFGFLQTNFKLNNSGVYNARWGVGSVGCIGLVQNSIFENCTESGVVADNGSILNVWQNNTFKTCSGNILWSADSSKIYAGNVTFDGTYNNVAANCGVSHIASELGFNTPIFKNISNSNSYALFVGWGGSISCGSNIVVSGFNKTNVAANVFSSSGYIHLY
Physico‐chemical
properties
protein length:445 AA
molecular weight: 48276,88720 Da
isoelectric point:5,46816
aromaticity:0,10337
hydropathy:0,02854

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QQV87844.1
1 445
Domain Start End Length (AA) Confidence
N-terminal 1 185 185 0,9705
Central domain 186 426 242 0,9714
C-terminal 427 445 18 0,8069
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-185
Central
186-426
C-terminal
427-445

Taxonomy

  Name Taxonomy ID Lineage
Phage Campylobacter phage CJLB-7
[NCBI] 		2781360 No lineage information
Host Campylobacter jejuni
[NCBI] 		197 cellular organisms > Bacteria > Pseudomonadati > Campylobacterota > Epsilonproteobacteria > Campylobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QQV87844.1 [NCBI]
Genbank nucleotide accession
MW057933.1 [NCBI]
CDS location
range 40123 -> 41460
strand +
CDS
ATGGCATATGGTATAGATAATGTATGGTCATTTGTAAATGATTCACAAACTGGCATAGACAAGGTTCCAGTCAATAAAATAATATTGCTAAAAAGTGAAAATAAATTATATTTAAAAAAACAAGAAGGTGGATTGACAGCTACATCAACTGTAAATGAAGCAATTCTTAATAATAGTATTGTATCATTATCAAGTGATGGCAATTTAGGTGTAGTTGATAGTAATATCAAAGTAATAAATGATCCAGAATTTACCACAACTGATAATATCAGTAAAGGTAAAAAAATGTTCAAAATAGCAATTGAACCTGATACAATAATTCAAGTTCTGGGATTATATATAGAAAATACTGCAAACTCATCAATAGATGCAGTACCTTTTGACTACATTATTAAAAATAATAATGTAGTAATATATACTGATAATGATACAATTCCTATAAAAAAGATAATTTATTCAAAAACAAAAAGCAGTCAATTAAGTTTAAGTAGTTTACCTAAACTATTAACAGAGAATCTTGAATGGACTGTTGGTACAAATGGAACATTTTCAAATTTAGTAGATGCATTACAAGAAGCTTCAAAATATATATCTGTGACAAATTATAAAATTACTATAACAATGAAGTCATCGTATAAATTAACTGAAAGTCTTCATATCAATAATGCAAATTTAGGACATGTTGTTTTAACATCAGAAGATGATTATGTTGATTTTGATGGAACTATGACACCTAATCCCGCTTTTATAAATCAATACGCAGCAAATCCTATTGCAGTTTCATTTACATTTGGAATATCTCCAATAATATCGTTTAAACTTAGATTTAGTTCAGTACCTACTATGTTTTCGATGGCATTTGGATTCTTACAAACTAATTTTAAGCTTAATAATTCTGGTGTATATAATGCAAGATGGGGTGTTGGTAGTGTTGGATGTATAGGATTAGTACAAAACAGTATATTTGAAAATTGTACTGAATCGGGTGTAGTAGCAGACAATGGTAGTATATTAAATGTGTGGCAAAATAATACATTTAAAACTTGCAGTGGAAATATACTATGGAGTGCTGATTCAAGTAAAATATATGCTGGAAATGTTACATTTGATGGAACATATAATAATGTAGCTGCTAATTGTGGTGTTTCGCATATTGCATCTGAATTAGGATTTAATACCCCTATATTTAAAAATATTTCAAACAGTAATTCATATGCTTTATTTGTTGGTTGGGGTGGGAGTATTTCATGTGGTAGTAATATAGTTGTATCTGGTTTTAATAAAACTAATGTTGCTGCAAATGTTTTTTCATCTAGTGGTTATATACACTTATATTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
e637a8b866060999fb6b69d9220d30bb0b8ed9dd591c1a5349fdffa1df5f5d1f
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7096
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Bacteriophages are an effective tool to reduce Campylobacter contamination in foods Vikram,A., Woolston,J. and Sulakvelidze,A. 2017-11-23 — GenBank