Protein

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Genbank accession
WYW04051.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
Protein sequence
MADEFLASNEFPGDGVTTLFNVAFKGNRPDAESGTVPYINASDVKAQQITPATATSPESAIDLTCTPVGPNQFNVTPVVPTGKIVRIYRATQDEYNLVDYQSLQTVGEADLDLANRQSLFIVQEAHDLAVRASEDAQDANTVAFGAVAVANAAAADAATALDTANQALGASSAAVSIATDAAEAADAAEAHASAADAAAAAAQVAADNAEAASAAAVATANAAASDAATALATANGISATANQALTNSNTAIATANAAEATANAIAGTANSALAAASSAVATANAANDTANGIAATADLALDNSAEALDTANDALALVVNKQNLNDNLTALSGLTGAADRVPYFTGLGALSLANFTAYGRSLAALTDSAGLKALANIPGRNVLINGSMMIANRGSSVTVPDPLGLYGGPDRWICVNSAGGTMSQYSSTASGSDPIPTIVQQVTATPTDLSGTHYLGGIQQRIEGYNARKLVGKALSLSFLFQSNVNGVYSVALRGGTTPQSWVSTFNYTGSGAPQRFSFAIPTVPAINVVANNSIGMELHIGTQNNGTYSTNTLGWQAGTFMKFNASTGWSSTIGNYISAGEVQLEIGPKSDFDHEDITTNLLRCQRYFESIPGTVDPGQGAYVYKPYKVGKRAPATLTLSGGSLSGANFDNGGGVYACRAPASVAATGQADFNLWADAEL
Physico‐chemical
properties
protein length:681 AA
molecular weight: 68931,04890 Da
isoelectric point:4,37736
aromaticity:0,06461
hydropathy:0,02996

Domains

Domains [InterPro]
DC_1152
ATT
13–211
DC_1152 DC_0568
IPR005604
ATT
74–130
IPR005604
WYW04051.1
1 681
Architecture
ATT
STR
ATT 13-211 | STR 230-681
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage vB_PpuP-SKa-3
[NCBI] 		3132674 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas putida KT2440 and
[NCBI] 		1481724 Heterolobosea > Eutetramitea > Lyromonadida > Psalteriomonadidae > Monopylocystis >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WYW04051.1 [NCBI]
Genbank nucleotide accession
PP496470.1 [NCBI]
CDS location
range 35972 -> 38017
strand +
CDS
ATGGCTGATGAATTTCTAGCGTCCAACGAATTCCCCGGCGACGGTGTGACGACTCTGTTCAACGTAGCGTTCAAGGGCAACCGCCCTGACGCTGAGTCGGGCACTGTTCCGTACATCAACGCCTCGGATGTCAAGGCGCAGCAGATTACTCCGGCCACGGCGACTTCGCCAGAATCCGCCATTGATCTGACCTGCACCCCAGTTGGTCCGAACCAGTTTAACGTAACACCTGTCGTGCCCACCGGCAAGATCGTAAGGATCTACCGCGCCACGCAGGACGAATACAACCTTGTCGATTACCAGTCCCTGCAAACCGTAGGTGAGGCTGACCTCGACTTGGCCAACCGTCAATCGCTGTTCATCGTACAGGAGGCACACGACCTCGCGGTGCGTGCCAGTGAAGATGCACAGGACGCAAACACTGTAGCCTTCGGCGCTGTGGCTGTGGCTAACGCCGCTGCTGCCGATGCGGCCACTGCACTTGACACGGCTAACCAAGCCCTCGGTGCATCGTCTGCTGCCGTCTCTATCGCTACCGACGCCGCTGAAGCTGCGGACGCTGCTGAAGCTCACGCCTCTGCTGCTGACGCTGCTGCTGCTGCTGCACAGGTCGCTGCCGACAATGCCGAAGCTGCGTCTGCTGCCGCTGTAGCCACGGCCAACGCCGCTGCCTCTGACGCCGCTACGGCTCTGGCTACTGCCAACGGCATCTCGGCTACGGCCAACCAAGCGTTGACCAACTCCAACACTGCAATCGCTACGGCGAACGCAGCGGAAGCTACGGCCAACGCCATTGCCGGTACGGCGAACTCTGCGCTTGCCGCAGCTTCGTCTGCTGTGGCCACCGCGAACGCTGCTAACGACACAGCCAACGGCATTGCCGCTACGGCTGATCTGGCGCTGGACAACTCCGCTGAAGCCCTCGACACCGCGAACGACGCACTGGCCCTTGTGGTCAACAAGCAGAACTTGAACGACAACCTGACTGCACTCTCGGGCTTGACCGGGGCTGCGGATCGTGTGCCGTACTTCACTGGCTTGGGTGCCCTGTCGCTGGCGAACTTCACCGCGTATGGCCGCTCGCTGGCTGCGCTGACAGACTCCGCTGGGCTGAAGGCTCTCGCCAACATCCCCGGTAGGAACGTGCTGATCAACGGCTCAATGATGATTGCAAACCGTGGTTCATCAGTTACCGTCCCTGACCCGCTGGGTCTGTATGGTGGACCTGACCGCTGGATCTGCGTCAACTCAGCTGGCGGTACGATGTCTCAGTATAGCTCGACGGCTTCCGGCTCTGATCCGATCCCTACGATTGTACAGCAAGTGACCGCCACGCCGACTGACCTGTCAGGCACCCATTACTTGGGCGGCATCCAGCAGCGGATCGAGGGCTACAACGCCCGTAAGCTGGTGGGCAAGGCACTGTCACTGTCGTTCCTGTTTCAGTCCAATGTTAACGGGGTATACTCAGTAGCACTGCGCGGCGGCACTACGCCGCAGTCGTGGGTTAGTACCTTCAACTACACAGGGAGCGGTGCACCGCAGCGTTTCTCCTTCGCAATCCCTACTGTGCCAGCGATAAACGTGGTTGCTAACAATAGTATCGGTATGGAACTACACATCGGTACGCAGAACAACGGAACTTACAGTACCAATACCCTCGGGTGGCAGGCTGGCACGTTCATGAAGTTCAACGCTTCCACTGGGTGGAGTAGCACAATCGGTAACTATATCTCTGCTGGTGAGGTCCAACTTGAGATCGGCCCTAAGTCCGACTTCGATCACGAGGACATCACCACCAACTTGCTGCGTTGCCAACGGTACTTTGAGTCGATTCCCGGTACAGTAGACCCCGGCCAAGGGGCATACGTGTACAAGCCATACAAAGTTGGTAAGCGTGCACCAGCGACATTAACACTGTCAGGTGGTAGCCTCTCTGGCGCTAACTTTGACAACGGCGGTGGTGTGTACGCATGCCGTGCCCCGGCGAGTGTAGCCGCAACTGGGCAAGCAGACTTCAACCTATGGGCTGATGCGGAGCTTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
5088799a8fa96e81562b082ffa34bcd03da814e1a9ee9ced93243bc632744b58
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7655
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and characterization of a phage collection against Pseudomonas putida Brauer,A., Rosendahl,S., Kangsep,A., Rikberg,R., Lewanczyk,A.C., Horak,R. and Tamman,H. — — GenBank