Protein

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Genbank accession
XFC52004.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,84
TSP
Evidence RBPdetect2
Probability 0,92
Protein sequence
MGYFQMTRNVEEIFGGVVVAPHQIPFKYTSTNGGETFLSLPFYPITGFVTINGGVQVPLDNFEIDRNTLNLGRELEAGDVVFCLFDKIMSPQDASNSAVRIYKFLSVGGETEFTPDFTTYGVQSLYIDGKYKTPGEDYNYFKTSGKVVLDAALPTGVWVVAEMSIKQNIPALAGNNGASEIGTNSGKSLAESLGTWIDTTIAIFEMTEAPSVIQTRGFYETNDGGAGVWVATGIISPSLAGTHVPSQAKVYNAGGVEYQLNVKSGFEISAKANGVKAVDDVNAETEDFVCLGEAINGITSRVKTMVNDEDLKTYLKVIIPSEYPLRIGKTSIKAYSRLKLDFQQASIYDRPSPSNRQEVTGVYMNAIERGIEDVRAISARFGGATSYSNMTLSDFHIEGGKFYGDHTTDKGVADCSTGTGLFTYNMENSSIRNTWFQGFACGRQYNRTGPRYYFDNLGNKVVGTLVPEVTSSGTGSYEGVKEWSVTAYGCRYLYLRVLSNWARFDNCKFGTYANWSSSPDGNQCEYFIENRGAGVVFSGGVIESNTSAANPSKGFVRDFARGCTFEAVYYENCLTAGWVIATPERSQYNRANGLFITAVGSQYTGSSKGAALVKFEEGYFGSYDPATGLYKTGGWETNYQYAGGVNTWSVGQPELDSGAFPHGGYDFKYGTYGIHYSGTVPDADSLRDTQEGNEFLSPYGLSVNSGILLFPTLSPAYQSNIVVWYKDLTGNFDPRNIVVGDFNNNNVSDGTSNALYRTNGFNYYDYGNGYKAAIVPYVNPRALDNRMTTSAGRKLKITVTSDAPIILKSIQAFVGGTPIFPPAIKDYVPRSQRDRIWGTMSAGSTNSGAYYGPLVGGGIFRPGDVVLPFVPFGNAALMNPASYTDNSSGFGASAETAVITGGATWGAGLAGATFTLTVESQDTINNWTTVSVPSAYLPYIFTGMPVYITANSSGGSTGLINTVRRVVNSDGTLSNKYVLYGALGAVGTTLTVSTTSSYTVRTGVSSTISGVSSSFSSGSWLGTATGDLRVGFGASGSGTRQTRYYYNGTDVSAVVGSSGPNALHLTGTGGITLNGSLLTSTSYSFGSASAYPANIYSQNAVTVVSDVHYKMDIVELNDAEIECAKACAKLYRRYKLKTAVAIKGEDGARYHVGTIAQLVMQAFTDAGLDWTKYGIITYESWEASDAVVETVGAVYDEEGNELAPETTMEITPAKEAGEIYMVRYDEFNSFVMAGQEARLQALEEK
Physico‐chemical
properties
protein length:1245 AA
molecular weight: 133945,38890 Da
isoelectric point:4,98838
aromaticity:0,11968
hydropathy:-0,18297

Domains

Domains [InterPro]
DC_0063
STR
1–809
DC_0063 IPR036388
IPR030392
CHP
1105–1245
IPR030392
IPR030392
CHP
1105–1168
IPR030392
cd10144
CHP
1105–1238
cd10144
XFC52004.1
1 1245
Architecture
STR
RBD
STR 1-809 | RBD 1093-1245
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XFC52004.1
1 1245
Domain Start End Length (AA) Confidence
N-terminal 1 279 279 0,9871
Central domain 280 1025 747 0,9844
C-terminal 1026 1245 219 0,9430
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-279
Central
280-1025
C-terminal
1026-1245

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage FKP10
[NCBI] 		3237190 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XFC52004.1 [NCBI]
Genbank nucleotide accession
PP974338.1 [NCBI]
CDS location
range 10728 -> 14465
strand +
CDS
ATGGGGTATTTTCAAATGACCAGAAACGTAGAAGAAATCTTCGGTGGGGTAGTCGTAGCACCGCATCAGATCCCGTTCAAGTACACTTCAACAAACGGTGGGGAAACTTTCCTTTCCCTGCCATTTTATCCCATCACCGGGTTCGTTACTATCAACGGTGGTGTGCAGGTTCCTCTTGATAATTTCGAAATAGACAGGAATACATTAAATCTTGGCCGCGAACTGGAAGCCGGGGATGTTGTATTCTGTCTGTTTGATAAAATCATGTCTCCTCAAGATGCGAGCAATAGTGCAGTTCGTATCTACAAATTCCTTTCTGTCGGCGGTGAAACAGAATTTACTCCTGATTTCACAACTTATGGTGTACAGTCTTTGTACATAGACGGAAAATACAAAACGCCCGGTGAAGATTACAATTATTTCAAAACTTCAGGTAAGGTTGTTCTTGATGCAGCATTACCAACAGGTGTTTGGGTCGTTGCCGAGATGTCAATTAAGCAAAATATCCCGGCGCTGGCTGGCAACAATGGTGCAAGTGAAATTGGTACGAATTCCGGGAAATCCTTAGCCGAGTCCTTGGGTACTTGGATTGATACTACCATCGCAATCTTTGAAATGACCGAAGCCCCGTCTGTCATTCAAACCAGAGGTTTTTATGAAACCAATGATGGTGGTGCCGGAGTATGGGTGGCTACGGGAATTATATCCCCCTCTCTTGCGGGTACACATGTTCCATCTCAGGCTAAAGTTTATAATGCCGGAGGTGTGGAGTATCAGCTTAACGTGAAGTCGGGTTTTGAGATTTCCGCTAAAGCCAACGGGGTTAAGGCAGTTGATGATGTTAACGCCGAAACTGAGGACTTTGTTTGTCTCGGTGAGGCTATAAACGGTATCACCTCACGTGTCAAAACTATGGTCAACGATGAAGACCTGAAGACGTACTTAAAAGTTATTATACCATCCGAGTACCCATTACGTATTGGTAAAACCAGTATCAAGGCGTACTCCCGCTTGAAGCTAGATTTTCAGCAGGCTTCAATCTACGACCGGCCAAGCCCGTCAAATCGTCAGGAAGTCACCGGCGTTTATATGAACGCCATTGAGCGTGGCATTGAAGATGTCAGGGCTATCTCTGCAAGGTTTGGTGGCGCGACGTCTTACTCGAATATGACTCTCTCCGATTTTCATATCGAAGGGGGTAAGTTCTATGGAGACCATACCACTGATAAGGGGGTTGCAGATTGCAGCACTGGTACAGGCCTGTTTACGTACAACATGGAAAACTCCAGTATTCGTAACACATGGTTCCAGGGATTTGCTTGCGGTCGTCAGTACAACCGCACCGGGCCTAGGTATTACTTTGATAACTTAGGTAATAAAGTGGTTGGAACCCTGGTTCCCGAAGTAACCTCATCAGGTACTGGTTCCTACGAAGGCGTTAAGGAGTGGTCTGTTACTGCTTATGGCTGCCGCTATTTGTACCTGCGAGTTCTTAGTAACTGGGCACGGTTCGATAACTGCAAATTCGGCACCTACGCTAACTGGTCTTCAAGCCCTGATGGTAACCAGTGTGAATACTTTATTGAGAACCGAGGGGCTGGTGTAGTCTTCAGTGGTGGTGTAATTGAATCTAATACATCCGCCGCCAACCCATCAAAAGGCTTTGTGAGAGACTTCGCCCGTGGGTGTACGTTCGAGGCCGTTTACTACGAGAACTGCCTGACCGCTGGATGGGTCATAGCCACTCCTGAAAGAAGCCAGTACAACCGAGCTAATGGACTATTCATTACGGCTGTCGGAAGTCAGTATACTGGGTCGTCGAAGGGAGCTGCCTTGGTTAAATTTGAAGAGGGGTACTTTGGTTCATATGATCCTGCTACTGGGCTGTATAAAACAGGAGGTTGGGAAACTAATTACCAGTATGCAGGTGGGGTTAATACATGGTCTGTAGGGCAGCCTGAGCTAGATTCTGGAGCTTTCCCTCACGGTGGGTATGACTTTAAATATGGGACTTATGGTATTCACTACTCTGGAACTGTACCAGATGCTGACTCTCTTCGTGACACCCAAGAGGGTAATGAGTTTCTGTCTCCATATGGGTTATCGGTTAACTCCGGGATTCTGTTATTCCCTACGTTATCCCCGGCGTATCAGTCTAATATCGTAGTTTGGTATAAAGACCTGACAGGGAACTTCGACCCAAGGAATATTGTCGTTGGTGATTTCAACAATAACAACGTGTCTGATGGTACTAGCAACGCACTCTACCGTACTAATGGGTTTAATTACTATGACTACGGTAATGGGTATAAAGCGGCTATTGTCCCTTACGTTAACCCTCGTGCTTTAGATAACAGGATGACCACATCTGCTGGACGGAAGTTAAAAATTACCGTAACCAGTGATGCCCCTATTATCCTGAAAAGCATCCAGGCATTTGTAGGGGGTACTCCAATATTCCCACCAGCCATTAAGGATTATGTACCGCGTTCTCAACGGGACCGCATTTGGGGTACTATGTCTGCTGGTTCTACGAATTCTGGTGCATACTATGGCCCACTGGTTGGCGGCGGTATCTTCCGACCTGGCGATGTAGTGTTACCCTTTGTTCCGTTCGGTAATGCTGCTCTGATGAATCCGGCGTCATACACGGATAACTCATCAGGGTTTGGGGCAAGTGCAGAGACTGCTGTTATTACAGGAGGGGCAACATGGGGAGCAGGGTTAGCCGGAGCAACCTTTACTCTTACTGTAGAATCACAGGATACAATCAATAACTGGACAACTGTTTCAGTGCCGTCCGCTTATTTACCGTATATCTTCACAGGTATGCCGGTTTACATAACTGCAAACTCCTCTGGAGGGTCTACCGGATTAATAAACACTGTACGCAGGGTTGTTAACTCTGATGGGACCCTGAGCAACAAGTATGTGCTGTATGGTGCTCTTGGGGCTGTTGGTACAACCTTAACGGTATCAACAACCTCAAGCTACACAGTACGTACTGGAGTCTCTTCGACGATTTCAGGTGTTTCCAGCTCGTTCTCTTCAGGATCGTGGTTAGGTACAGCAACTGGAGATTTGCGTGTAGGTTTCGGGGCGTCAGGTTCTGGCACACGCCAAACTCGTTACTACTACAACGGTACGGATGTATCTGCTGTAGTCGGCTCCAGTGGTCCCAACGCGTTGCACTTAACAGGCACTGGCGGCATCACCCTTAACGGGTCTTTGCTGACAAGCACCTCCTATTCATTTGGTAGTGCATCGGCATACCCGGCAAACATCTACTCTCAAAATGCTGTGACCGTAGTCTCTGATGTGCACTACAAAATGGACATAGTAGAGTTAAACGATGCAGAGATTGAGTGTGCTAAAGCCTGTGCCAAGTTGTATCGTCGCTATAAGTTGAAAACAGCTGTAGCTATAAAAGGTGAAGATGGTGCCAGATACCACGTGGGAACCATTGCTCAACTTGTAATGCAGGCATTTACTGATGCTGGACTGGACTGGACGAAGTACGGGATCATTACTTATGAGTCTTGGGAGGCTTCCGATGCAGTTGTTGAAACTGTAGGAGCTGTCTATGATGAAGAAGGTAATGAGTTAGCTCCTGAAACCACCATGGAAATTACCCCTGCTAAAGAGGCCGGGGAAATCTACATGGTTCGCTATGACGAATTTAACAGCTTCGTTATGGCTGGGCAGGAAGCCAGACTTCAGGCTTTAGAGGAGAAGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
fdf17d0a0d1328514d8f0958c2238b734d8b6bc00bb39eabb56f66eb22bdd7c8
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5587
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
High activity and specificity of bacteriophage cocktails against carbapenem-resistant Klebsiella pneumoniae belonging to high-risk clones CG258 and ST307 Jimenez Quiceno,J., Salazar Ospina,L. and Tellez Carrasquilla,S. 2018-04 — GenBank