Protein

View in Explore
Genbank accession
YP_010664390.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,91
TF
Evidence RBPdetect2
Probability 0,95
Protein sequence
MMSQSIITTAFEQWKAQEAAGGNTVVVDEFVLALVPGLDPNAPIDRSEGLPPAGQIVHRQAVNKTGVVNQNAVVYSITLGTEIGDFDFNWIGLVNKTSGTVAMIVHAPTQRKIANANGQQGNALTRSFLMEYDGAASETGITVPAETWQIDFTARLTGIDEMQRLINLDHYGLGAFFADGFLVAKTGQQYYVTAGSAYVGGLRAVLAANTDIIVSAKPVKVWADVSLQGNVVSQWESVITVTVAATLADYQDNAGFMHRVFAVASIDAAGNITDLRPQGSLTEQETSDALAQHEKSRNHPDGTLTEKGFVQMSSATDSDSETLAATSKAAKIAMDNANARLAKERNGADIPNAALFRQNLALKGAALVDIGNTAGTAAAGNDIRIVNAVQSTNTAISLPGSLTTAGTVTGGGISSIGAVYAGNTAAWLAADGNVYGSVWGGYLSTYIGNMRNTASKDWNGWFRDSATGLLIQWCTGPGVIHETQNVVTNFPIAFPNACFMVYASTKSPDQNWNNDVFYQVANWSNSSAVCMLQRPNGATAGTSVYPQILAIGA
Physico‐chemical
properties
protein length:553 AA
molecular weight: 58262,47090 Da
isoelectric point:4,93422
aromaticity:0,07957
hydropathy:-0,01013

Domains

Domains [InterPro]
DC_1466
ATT
1–193
DC_1466 IPR005068 G3DSA:6.20.70.20 G3DSA:2.60.40.3940
IPR022225
ATT
4–160
IPR022225 IPR054075
DC_0957
STR
155–467
DC_0957
YP_010664390.1
1 553
Architecture
ATT
STR
RBD
ATT 1-193 | STR 194-467 | RBD 468-552 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Yersinia phage vB_YenM_324
[NCBI] 		2914024 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Yersinia enterocolitica
[NCBI] 		630 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010664390.1 [NCBI]
Genbank nucleotide accession
NC_070917.1 [NCBI]
CDS location
range 21944 -> 23605
strand +
CDS
ATGATGTCTCAATCAATTATCACCACTGCTTTTGAGCAGTGGAAAGCGCAGGAAGCCGCAGGCGGTAACACCGTGGTGGTGGATGAATTTGTATTGGCTTTGGTGCCGGGACTGGATCCGAATGCCCCGATTGACCGCAGCGAGGGTTTACCGCCTGCCGGGCAGATTGTTCACCGTCAGGCCGTTAATAAAACCGGTGTGGTTAATCAGAATGCGGTGGTGTACTCCATCACGTTGGGTACCGAAATCGGTGATTTTGATTTTAACTGGATTGGTCTGGTGAATAAGACCAGCGGCACGGTGGCCATGATTGTTCATGCACCGACCCAACGCAAGATTGCTAACGCCAATGGCCAGCAGGGCAATGCCTTAACCCGCAGTTTCCTGATGGAGTATGACGGTGCCGCCAGTGAAACGGGGATCACTGTCCCGGCAGAAACGTGGCAGATTGATTTTACCGCCCGTCTGACCGGCATTGATGAAATGCAGCGCCTGATTAACCTTGACCACTACGGCCTCGGCGCATTTTTCGCTGATGGTTTTTTGGTGGCTAAGACCGGCCAGCAATATTACGTGACGGCAGGCAGCGCTTATGTGGGCGGGTTACGTGCCGTGCTGGCGGCTAACACGGATATTATAGTTTCAGCCAAACCAGTGAAAGTGTGGGCTGACGTGAGTTTGCAGGGCAATGTGGTCAGTCAGTGGGAAAGCGTGATCACAGTGACCGTGGCGGCAACGTTGGCAGATTATCAGGACAATGCCGGGTTTATGCACCGGGTGTTTGCGGTGGCCAGCATTGATGCTGCGGGCAATATTACCGACCTGCGCCCGCAAGGTTCGCTGACCGAACAAGAAACCAGCGACGCCTTAGCGCAGCATGAAAAATCCCGTAATCACCCAGACGGTACGCTAACGGAAAAAGGTTTTGTTCAGATGAGCAGCGCCACCGATAGCGACAGCGAAACGCTGGCCGCAACATCAAAAGCGGCCAAAATAGCGATGGATAATGCCAACGCGCGGTTAGCCAAAGAGCGCAACGGCGCGGATATTCCCAACGCGGCATTATTCCGCCAAAACCTTGCACTGAAAGGCGCGGCGCTGGTTGATATCGGTAACACTGCCGGTACTGCCGCAGCGGGTAATGATATCCGCATAGTAAATGCAGTGCAGTCCACCAACACCGCGATTAGTTTACCCGGTAGCCTGACTACGGCAGGCACTGTGACAGGGGGGGGTATTTCATCTATTGGGGCGGTTTATGCAGGCAATACGGCGGCATGGCTCGCCGCTGACGGCAATGTTTACGGCAGTGTATGGGGTGGTTACTTATCTACCTATATTGGCAACATGCGAAATACCGCCTCAAAAGATTGGAATGGATGGTTTAGAGATTCAGCAACCGGGTTACTCATCCAGTGGTGTACTGGCCCCGGCGTGATACACGAAACCCAAAATGTGGTTACTAACTTTCCAATTGCGTTCCCGAACGCATGTTTCATGGTGTATGCATCAACAAAAAGCCCGGACCAAAATTGGAATAATGATGTTTTTTATCAAGTTGCTAACTGGTCAAATTCATCTGCCGTATGCATGTTGCAACGACCAAACGGCGCCACGGCTGGCACGTCAGTTTATCCGCAAATTTTAGCTATTGGCGCTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
3af4472229e8c30bc851d0bf640d3fae1aea7f2ba45d08667af800ce4b910e9f
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8299
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genomes of temperate Yersinia enterocolitica phages Hammerl,J.A. and Hertwig,S. 2022-06-17 — GenBank