Protein

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Genbank accession
YP_238874.1 [GenBank]
Protein name
tail collar fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,94
Protein sequence
MVANNIKNHISDSAESVNYTGDTWPAIVTTVADALDRVAPWAIIDNGLPLATTQIAGIIRIATTAEMQAGTSANTAITPALLKLAMETPQASETIVGNTRYATNAEALALTLNTAAITPANLGYVFANKAATESARGTMRISTQAQATSGTDDATTMTPLKTKLAIQALSQAWGTATESARGVVQMATVAQALQGTLRDGFAISPYTLSKMAGTESAAGMFKIASNSQILALADNTVVVTPAKLDILKATASQLGLVKLSGVSTAAANTALAASAPVLYTSGGIITGDVTFTGNMQGIQWSRNTDMAHIVFKNDSNADSNSFMQFCVGDDNNEYFRWVNRFSGSDNIMATLRPGGHMWLAGNIDVNDFYIRSDRRLKHGFKPIENALDKIDLLNPGTYHKQYSLTDDRIVGLEAGIFAQDFQKAMPEGVRSLEDGTLTVSPMGAIAFLIQCNKELKARLEKLEGIK
Physico‐chemical
properties
protein length:466 AA
molecular weight: 49467,54720 Da
isoelectric point:5,64283
aromaticity:0,06223
hydropathy:-0,01717

Domains

Domains [InterPro]
DC_0176
STR
1–413
DC_0176
IPR030392
CHP
372–429
IPR030392
IPR030392
CHP
372–466
IPR030392
DC_1318
RBD
396–465
DC_1318
YP_238874.1
1 466
Architecture
STR
RBD
STR 1-413 | RBD 414-466
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Aeromonas phage 31
[NCBI] 		321023 Uroviricota > Caudoviricetes > Pantevenvirales > Biquartavirus > Biquartavirus 44RR2
Host Aeromonas salmonicida
[NCBI] 		645 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Aeromonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_238874.1 [NCBI]
Genbank nucleotide accession
NC_007022 [NCBI]
CDS location
range 89773 -> 91173
strand +
CDS
ATGGTCGCAAATAACATCAAAAACCACATCTCCGATTCAGCCGAATCGGTTAACTACACTGGTGATACCTGGCCGGCGATTGTGACTACGGTCGCCGATGCTCTAGATCGAGTAGCTCCGTGGGCTATTATCGATAACGGGCTGCCTTTGGCTACTACCCAGATTGCTGGTATTATCCGAATCGCTACTACTGCTGAAATGCAGGCAGGAACAAGTGCCAACACAGCGATCACACCTGCTTTGTTGAAGTTGGCGATGGAAACCCCGCAAGCTTCCGAGACCATTGTCGGGAATACGCGATACGCGACAAACGCTGAAGCTTTAGCTCTCACGTTAAATACAGCAGCGATCACACCAGCAAATCTTGGGTATGTTTTCGCGAATAAGGCTGCAACTGAATCAGCTCGCGGCACAATGCGTATTTCGACCCAGGCGCAAGCAACCTCTGGGACTGATGATGCGACAACCATGACGCCACTTAAAACTAAGTTGGCTATCCAGGCTCTAAGTCAGGCATGGGGAACTGCAACTGAATCAGCTCGCGGCGTTGTTCAGATGGCTACCGTAGCGCAAGCATTGCAAGGAACATTGCGTGACGGTTTTGCGATAAGCCCATACACTCTGTCAAAAATGGCTGGAACTGAATCTGCTGCTGGGATGTTTAAAATTGCATCTAATTCGCAAATTCTTGCCCTCGCTGATAACACCGTTGTCGTAACACCAGCTAAATTAGATATTTTGAAAGCAACTGCATCGCAATTGGGTCTTGTCAAACTATCAGGCGTATCAACTGCTGCTGCTAATACTGCCTTGGCCGCATCTGCGCCAGTACTTTACACTTCAGGCGGTATAATCACTGGTGATGTTACTTTCACTGGCAACATGCAAGGAATTCAATGGTCGCGAAATACGGATATGGCGCATATCGTTTTCAAAAATGATTCCAACGCCGATTCTAACTCGTTTATGCAATTCTGCGTTGGCGATGACAACAACGAATATTTCAGATGGGTAAACCGTTTTAGCGGATCTGACAATATTATGGCGACGCTTCGTCCAGGTGGTCATATGTGGCTGGCTGGTAATATCGATGTCAACGATTTCTATATTCGTTCTGATCGCCGTCTTAAGCATGGTTTCAAACCTATTGAAAATGCGCTTGATAAGATCGACCTCTTGAACCCGGGCACTTATCACAAACAATATTCATTGACCGACGACCGAATTGTCGGCTTGGAAGCTGGTATTTTCGCACAAGATTTCCAGAAGGCTATGCCTGAAGGCGTAAGATCATTGGAGGATGGAACGTTGACAGTTTCTCCTATGGGTGCGATAGCATTTTTAATACAATGCAACAAAGAACTTAAAGCACGTCTCGAAAAATTAGAGGGTATAAAATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
26ce30f1540ca2cfdb58f8b5c53f2d20bb8c110ce977b8fbecdc5026036f89fa
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7768
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50